RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
SH3RF1-204ENST00000510806 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
SH3RF1-204ENST00000510806 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
SH3RF1-204ENST00000510806 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
SH3RF1-204ENST00000510806 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
SH3RF1-204ENST00000510806 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
SH3RF1-204ENST00000510806 ABCA5Q8WWZ7 1642 aa11.1□□□□□ -0.63
SH3RF1-204ENST00000510806 MAMSTRQ6ZN01 415 aa11.1□□□□□ -0.63
SH3RF1-204ENST00000510806 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
SH3RF1-204ENST00000510806 PYGBP11216 843 aa11.09□□□□□ -0.63
SH3RF1-204ENST00000510806 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
SH3RF1-204ENST00000510806 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
SH3RF1-204ENST00000510806 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
SH3RF1-204ENST00000510806 IER5LQ5T953 404 aa11.07□□□□□ -0.64
SH3RF1-204ENST00000510806 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
SH3RF1-204ENST00000510806 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
SH3RF1-204ENST00000510806 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
SH3RF1-204ENST00000510806 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
SH3RF1-204ENST00000510806 POTEMA6NI47 508 aa11.06□□□□□ -0.64
SH3RF1-204ENST00000510806 SEC24BO95487 1268 aa11.05□□□□□ -0.64
SH3RF1-204ENST00000510806 NUP160Q12769 1436 aa11.03□□□□□ -0.64
SH3RF1-204ENST00000510806 POTEGQ6S5H5 508 aa11.03□□□□□ -0.64
SH3RF1-204ENST00000510806 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
SH3RF1-204ENST00000510806 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
SH3RF1-204ENST00000510806 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
SH3RF1-204ENST00000510806 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
SH3RF1-204ENST00000510806 ADAMTS12P58397 1594 aa11□□□□□ -0.65
SH3RF1-204ENST00000510806 IRX5P78411 483 aaPredicted RBP10.99□□□□□ -0.65
SH3RF1-204ENST00000510806 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
SH3RF1-204ENST00000510806 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
SH3RF1-204ENST00000510806 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
SH3RF1-204ENST00000510806 SHROOM2Q13796 1616 aa10.97□□□□□ -0.65
SH3RF1-204ENST00000510806 ERCC6L2Q5T890 1561 aa10.96□□□□□ -0.65
SH3RF1-204ENST00000510806 GSE1Q14687 1217 aa10.94□□□□□ -0.66
SH3RF1-204ENST00000510806 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
SH3RF1-204ENST00000510806 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
SH3RF1-204ENST00000510806 PLCG2P16885 1265 aa10.93□□□□□ -0.66
SH3RF1-204ENST00000510806 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
SH3RF1-204ENST00000510806 IGF1RP08069 1367 aa10.9□□□□□ -0.66
SH3RF1-204ENST00000510806 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
SH3RF1-204ENST00000510806 PRG4Q92954 1404 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-204ENST00000510806 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
SH3RF1-204ENST00000510806 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
SH3RF1-204ENST00000510806 SLAIN1Q8ND83 568 aa10.86□□□□□ -0.67
SH3RF1-204ENST00000510806 KIF27Q86VH2 1401 aa10.85□□□□□ -0.67
SH3RF1-204ENST00000510806 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
SH3RF1-204ENST00000510806 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
SH3RF1-204ENST00000510806 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
SH3RF1-204ENST00000510806 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
SH3RF1-204ENST00000510806 PSEN1P49768 467 aa10.81□□□□□ -0.68
SH3RF1-204ENST00000510806 CUL7Q14999 1698 aa10.81□□□□□ -0.68
SH3RF1-204ENST00000510806 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
SH3RF1-204ENST00000510806 CARMIL1Q5VZK9 1371 aa10.79□□□□□ -0.68
SH3RF1-204ENST00000510806 ST18O60284 1047 aa10.78□□□□□ -0.68
SH3RF1-204ENST00000510806 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
SH3RF1-204ENST00000510806 KIF13AQ9H1H9 1805 aa10.78□□□□□ -0.68
SH3RF1-204ENST00000510806 MAPKBP1O60336 1514 aa10.77□□□□□ -0.69
SH3RF1-204ENST00000510806 ABCC10Q5T3U5 1492 aa10.76□□□□□ -0.69
SH3RF1-204ENST00000510806 ILDR1Q86SU0 546 aaPredicted RBP10.76□□□□□ -0.69
SH3RF1-204ENST00000510806 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
SH3RF1-204ENST00000510806 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
SH3RF1-204ENST00000510806 PDAP1Q13442 181 aaKnown RBP10.75□□□□□ -0.69
SH3RF1-204ENST00000510806 FAM69CQ0P6D2 419 aa10.73□□□□□ -0.69
SH3RF1-204ENST00000510806 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
SH3RF1-204ENST00000510806 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
SH3RF1-204ENST00000510806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.72□□□□□ -0.69
SH3RF1-204ENST00000510806 PTPRGP23470 1445 aa10.72□□□□□ -0.69
SH3RF1-204ENST00000510806 TNIKQ9UKE5 1360 aa10.71□□□□□ -0.69
SH3RF1-204ENST00000510806 DIP2BQ9P265 1576 aa10.7□□□□□ -0.7
SH3RF1-204ENST00000510806 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
SH3RF1-204ENST00000510806 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
SH3RF1-204ENST00000510806 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
SH3RF1-204ENST00000510806 IQGAP2Q13576 1575 aa10.69□□□□□ -0.7
SH3RF1-204ENST00000510806 DISP1Q96F81 1524 aa10.68□□□□□ -0.7
SH3RF1-204ENST00000510806 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
SH3RF1-204ENST00000510806 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
SH3RF1-204ENST00000510806 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
SH3RF1-204ENST00000510806 ABCC2Q92887 1545 aa10.67□□□□□ -0.7
SH3RF1-204ENST00000510806 UGGT2Q9NYU1 1516 aa10.67□□□□□ -0.7
SH3RF1-204ENST00000510806 L3MBTL3Q96JM7 780 aaPredicted RBP10.66□□□□□ -0.7
SH3RF1-204ENST00000510806 C3orf67Q6ZVT6 689 aa10.65□□□□□ -0.7
SH3RF1-204ENST00000510806 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
SH3RF1-204ENST00000510806 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
SH3RF1-204ENST00000510806 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
SH3RF1-204ENST00000510806 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
SH3RF1-204ENST00000510806 GLI2P10070 1586 aa10.62□□□□□ -0.71
SH3RF1-204ENST00000510806 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-204ENST00000510806 PRXQ9BXM0 1461 aa10.61□□□□□ -0.71
SH3RF1-204ENST00000510806 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
SH3RF1-204ENST00000510806 SNPHO15079 494 aa10.6□□□□□ -0.71
SH3RF1-204ENST00000510806 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
SH3RF1-204ENST00000510806 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
SH3RF1-204ENST00000510806 EFCAB3Q8N7B9 438 aa10.59□□□□□ -0.71
SH3RF1-204ENST00000510806 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.71
SH3RF1-204ENST00000510806 KDM6BO15054 1643 aa10.58□□□□□ -0.72
SH3RF1-204ENST00000510806 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
SH3RF1-204ENST00000510806 PPRC1Q5VV67 1664 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-204ENST00000510806 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
SH3RF1-204ENST00000510806 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-204ENST00000510806 KDM4FA0A1W2PPD8 638 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms