RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
USP38-202ENST00000510377 RGS3P49796 1198 aa19.67■□□□□ 0.74
USP38-202ENST00000510377 NESP48681 1621 aa19.67■□□□□ 0.74
USP38-202ENST00000510377 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
USP38-202ENST00000510377 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
USP38-202ENST00000510377 CNTLNQ9NXG0 1405 aa19.66■□□□□ 0.74
USP38-202ENST00000510377 MYOM3Q5VTT5 1437 aa19.66■□□□□ 0.74
USP38-202ENST00000510377 CASKIN1Q8WXD9 1431 aa19.65■□□□□ 0.74
USP38-202ENST00000510377 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.74
USP38-202ENST00000510377 EXOC6Q8TAG9 804 aa19.64■□□□□ 0.74
USP38-202ENST00000510377 NCOA2Q15596 1464 aa19.64■□□□□ 0.73
USP38-202ENST00000510377 PLIN1O60240 522 aa19.62■□□□□ 0.73
USP38-202ENST00000510377 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
USP38-202ENST00000510377 ST20-MTHFSA0A0A6YYL1 179 aa19.61■□□□□ 0.73
USP38-202ENST00000510377 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
USP38-202ENST00000510377 HFM1A2PYH4 1435 aa19.59■□□□□ 0.73
USP38-202ENST00000510377 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.73
USP38-202ENST00000510377 PPM1GO15355 546 aaPredicted RBP19.58■□□□□ 0.73
USP38-202ENST00000510377 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
USP38-202ENST00000510377 DDRGK1Q96HY6 314 aa19.57■□□□□ 0.72
USP38-202ENST00000510377 NAIPQ13075 1403 aa19.57■□□□□ 0.72
USP38-202ENST00000510377 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
USP38-202ENST00000510377 NUP155O75694 1391 aa19.57■□□□□ 0.72
USP38-202ENST00000510377 USP47Q96K76 1375 aa19.57■□□□□ 0.72
USP38-202ENST00000510377 SLC4A3P48751 1232 aa19.55■□□□□ 0.72
USP38-202ENST00000510377 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
USP38-202ENST00000510377 TCERG1O14776 1098 aaKnown RBP19.53■□□□□ 0.72
USP38-202ENST00000510377 PDE4AP27815 886 aa19.53■□□□□ 0.72
USP38-202ENST00000510377 KNSTRNQ9Y448 316 aa19.53■□□□□ 0.72
USP38-202ENST00000510377 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
USP38-202ENST00000510377 NEUROD2Q15784 382 aa19.52■□□□□ 0.71
USP38-202ENST00000510377 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.71
USP38-202ENST00000510377 RRP1P56182 461 aaKnown RBP19.51■□□□□ 0.71
USP38-202ENST00000510377 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
USP38-202ENST00000510377 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
USP38-202ENST00000510377 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
USP38-202ENST00000510377 ROCK2O75116 1388 aaKnown RBP19.5■□□□□ 0.71
USP38-202ENST00000510377 KTN1Q86UP2 1357 aaKnown RBP19.49■□□□□ 0.71
USP38-202ENST00000510377 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
USP38-202ENST00000510377 RALBP1Q15311 655 aa19.49■□□□□ 0.71
USP38-202ENST00000510377 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
USP38-202ENST00000510377 AQRO60306 1485 aaKnown RBP eCLIP19.45■□□□□ 0.76e-6■□□□□ 10.5
USP38-202ENST00000510377 MYBBP1AQ9BQG0 1328 aaKnown RBP19.45■□□□□ 0.7
USP38-202ENST00000510377 HNRNPMP52272 730 aaKnown RBP eCLIP19.45■□□□□ 0.7
USP38-202ENST00000510377 UPF2Q9HAU5 1272 aaKnown RBP19.45■□□□□ 0.7
USP38-202ENST00000510377 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
USP38-202ENST00000510377 MAP3K1Q13233 1512 aa19.44■□□□□ 0.7
USP38-202ENST00000510377 TNNT2P45379 298 aaPredicted RBP19.44■□□□□ 0.7
USP38-202ENST00000510377 FRAT1Q92837 279 aaPredicted RBP19.44■□□□□ 0.7
USP38-202ENST00000510377 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
USP38-202ENST00000510377 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
USP38-202ENST00000510377 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
USP38-202ENST00000510377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.75e-6■■■■■ 46.2
USP38-202ENST00000510377 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
USP38-202ENST00000510377 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
USP38-202ENST00000510377 TMF1P82094 1093 aa19.41■□□□□ 0.7
USP38-202ENST00000510377 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
USP38-202ENST00000510377 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
USP38-202ENST00000510377 SKAP1Q86WV1 359 aa19.4■□□□□ 0.7
USP38-202ENST00000510377 PNISRQ8TF01 805 aaKnown RBP19.4■□□□□ 0.7
USP38-202ENST00000510377 CCDC146Q8IYE0 955 aa19.38■□□□□ 0.69
USP38-202ENST00000510377 PANK3Q9H999 370 aa19.37■□□□□ 0.69
USP38-202ENST00000510377 IL27Q8NEV9 243 aa19.37■□□□□ 0.69
USP38-202ENST00000510377 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
USP38-202ENST00000510377 EFCAB5A4FU69 1503 aa19.36■□□□□ 0.69
USP38-202ENST00000510377 SPRYD3Q8NCJ5 442 aa19.34■□□□□ 0.69
USP38-202ENST00000510377 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
USP38-202ENST00000510377 PTPN23Q9H3S7 1636 aa19.34■□□□□ 0.69
USP38-202ENST00000510377 PDE3BQ13370 1112 aa19.33■□□□□ 0.69
USP38-202ENST00000510377 TOPBP1Q92547 1522 aa19.33■□□□□ 0.68
USP38-202ENST00000510377 SLKQ9H2G2 1235 aaPredicted RBP19.32■□□□□ 0.68
USP38-202ENST00000510377 SMG6Q86US8 1419 aaKnown RBP19.32■□□□□ 0.68
USP38-202ENST00000510377 STAG3Q9UJ98 1225 aa19.32■□□□□ 0.68
USP38-202ENST00000510377 BECN1Q14457 450 aa19.31■□□□□ 0.68
USP38-202ENST00000510377 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
USP38-202ENST00000510377 HSP90AA1P07900 732 aaKnown RBP19.3■□□□□ 0.68
USP38-202ENST00000510377 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
USP38-202ENST00000510377 CDK13Q14004 1512 aaKnown RBP19.29■□□□□ 0.68
USP38-202ENST00000510377 ANKRD30BQ9BXX2 1392 aa19.28■□□□□ 0.68
USP38-202ENST00000510377 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
USP38-202ENST00000510377 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
USP38-202ENST00000510377 ARID4BQ4LE39 1312 aaPredicted RBP19.27■□□□□ 0.67
USP38-202ENST00000510377 GOLGA2Q08379 1002 aa19.27■□□□□ 0.67
USP38-202ENST00000510377 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
USP38-202ENST00000510377 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
USP38-202ENST00000510377 SUPT6HQ7KZ85 1726 aaKnown RBP19.24■□□□□ 0.67
USP38-202ENST00000510377 MS4A1P11836 297 aa19.23■□□□□ 0.67
USP38-202ENST00000510377 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
USP38-202ENST00000510377 GSE1Q14687 1217 aa19.22■□□□□ 0.67
USP38-202ENST00000510377 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
USP38-202ENST00000510377 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
USP38-202ENST00000510377 DAPK1P53355 1430 aa19.21■□□□□ 0.67
USP38-202ENST00000510377 ANKRD50Q9ULJ7 1429 aa19.21■□□□□ 0.67
USP38-202ENST00000510377 BRD4O60885 1362 aaPredicted RBP19.21■□□□□ 0.67
USP38-202ENST00000510377 CLUAP1Q96AJ1 413 aa19.2■□□□□ 0.66
USP38-202ENST00000510377 BRPF3Q9ULD4 1205 aa19.2■□□□□ 0.66
USP38-202ENST00000510377 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
USP38-202ENST00000510377 NFKBIBQ15653 356 aa19.19■□□□□ 0.66
USP38-202ENST00000510377 GZF1Q9H116 711 aaPredicted RBP19.19■□□□□ 0.66
USP38-202ENST00000510377 FAM161AQ3B820 660 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms