RNA–Protein interactions for RNA: ENST00000508899.1

FREM3-202, Transcript of FRAS1 related extracellular matrix 3, humanhuman

TSL 5

Gene FREM3, Length 405 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-202ENST00000508899 PCF11O94913 1555 aaKnown RBP8.84□□□□□ -0.99
FREM3-202ENST00000508899 DIEXFQ68CQ4 756 aaKnown RBP8.84□□□□□ -0.99
FREM3-202ENST00000508899 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -1
FREM3-202ENST00000508899 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
FREM3-202ENST00000508899 ASTLQ6HA08 431 aaPredicted RBP8.83□□□□□ -1
FREM3-202ENST00000508899 ABCA5Q8WWZ7 1642 aa8.82□□□□□ -1
FREM3-202ENST00000508899 THOC2Q8NI27 1593 aaKnown RBP8.82□□□□□ -1
FREM3-202ENST00000508899 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
FREM3-202ENST00000508899 PKD2Q13563 968 aa8.81□□□□□ -1
FREM3-202ENST00000508899 BMP2KQ9NSY1 1161 aaPredicted RBP8.81□□□□□ -1
FREM3-202ENST00000508899 IGF1RP08069 1367 aa8.81□□□□□ -1
FREM3-202ENST00000508899 SAMD9Q5K651 1589 aa8.81□□□□□ -1
FREM3-202ENST00000508899 MAPKBP1O60336 1514 aa8.8□□□□□ -1
FREM3-202ENST00000508899 DCBLD2Q96PD2 775 aa8.8□□□□□ -1
FREM3-202ENST00000508899 PCDHB8Q9UN66 801 aa8.8□□□□□ -1
FREM3-202ENST00000508899 FYCO1Q9BQS8 1478 aa8.8□□□□□ -1
FREM3-202ENST00000508899 LAMC3Q9Y6N6 1575 aa8.8□□□□□ -1
FREM3-202ENST00000508899 LRRC9Q6ZRR7 1453 aa8.79□□□□□ -1
FREM3-202ENST00000508899 CCNB3Q8WWL7 1395 aa8.79□□□□□ -1
FREM3-202ENST00000508899 TIE1P35590 1138 aa8.79□□□□□ -1
FREM3-202ENST00000508899 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
FREM3-202ENST00000508899 FHAD1B1AJZ9 1412 aa8.79□□□□□ -1
FREM3-202ENST00000508899 FANCD2Q9BXW9 1451 aa8.78□□□□□ -1
FREM3-202ENST00000508899 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.78□□□□□ -1
FREM3-202ENST00000508899 CENPBP07199 599 aaPredicted RBP8.78□□□□□ -1
FREM3-202ENST00000508899 ATN1P54259 1190 aaPredicted RBP8.78□□□□□ -1
FREM3-202ENST00000508899 NEUROD1Q13562 356 aa8.78□□□□□ -1
FREM3-202ENST00000508899 TOPBP1Q92547 1522 aa8.78□□□□□ -1
FREM3-202ENST00000508899 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1
FREM3-202ENST00000508899 TTLL13PA6NNM8 815 aa8.77□□□□□ -1.01
FREM3-202ENST00000508899 LRRIQ1Q96JM4 1722 aa8.76□□□□□ -1.01
FREM3-202ENST00000508899 CARMIL1Q5VZK9 1371 aa8.75□□□□□ -1.01
FREM3-202ENST00000508899 ZNF467Q7Z7K2 595 aaPredicted RBP8.75□□□□□ -1.01
FREM3-202ENST00000508899 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
FREM3-202ENST00000508899 CASKIN1Q8WXD9 1431 aa8.74□□□□□ -1.01
FREM3-202ENST00000508899 KANK4Q5T7N3 995 aaPredicted RBP8.73□□□□□ -1.01
FREM3-202ENST00000508899 TTBK1Q5TCY1 1321 aaPredicted RBP8.73□□□□□ -1.01
FREM3-202ENST00000508899 ARHGEF11O15085 1522 aa8.71□□□□□ -1.01
FREM3-202ENST00000508899 TARBP1Q13395 1621 aaKnown RBP8.7□□□□□ -1.02
FREM3-202ENST00000508899 POTEFA5A3E0 1075 aa8.7□□□□□ -1.02
FREM3-202ENST00000508899 TMEM106CQ9BVX2 250 aa8.7□□□□□ -1.02
FREM3-202ENST00000508899 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
FREM3-202ENST00000508899 GCC2Q8IWJ2 1684 aa8.69□□□□□ -1.02
FREM3-202ENST00000508899 TRIM35Q9UPQ4 493 aa8.69□□□□□ -1.02
FREM3-202ENST00000508899 PHLDB1Q86UU1 1377 aa8.69□□□□□ -1.02
FREM3-202ENST00000508899 EHBP1L1Q8N3D4 1523 aa8.69□□□□□ -1.02
FREM3-202ENST00000508899 PBRM1Q86U86 1689 aa8.69□□□□□ -1.02
FREM3-202ENST00000508899 RGL2O15211 777 aa8.68□□□□□ -1.02
FREM3-202ENST00000508899 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
FREM3-202ENST00000508899 PSEN1P49768 467 aa8.68□□□□□ -1.02
FREM3-202ENST00000508899 GRIN2BQ13224 1484 aa8.68□□□□□ -1.02
FREM3-202ENST00000508899 RIOK3O14730 519 aaKnown RBP8.67□□□□□ -1.02
FREM3-202ENST00000508899 PDAP1Q13442 181 aaKnown RBP8.67□□□□□ -1.02
FREM3-202ENST00000508899 FMN1Q68DA7 1419 aa8.67□□□□□ -1.02
FREM3-202ENST00000508899 SETD5Q9C0A6 1442 aa8.67□□□□□ -1.02
FREM3-202ENST00000508899 RAB3GAP2Q9H2M9 1393 aa8.67□□□□□ -1.02
FREM3-202ENST00000508899 SUPT6HQ7KZ85 1726 aaKnown RBP8.66□□□□□ -1.02
FREM3-202ENST00000508899 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
FREM3-202ENST00000508899 POTEB2H3BUK9 544 aa8.66□□□□□ -1.02
FREM3-202ENST00000508899 SLC39A7Q92504 469 aa8.66□□□□□ -1.02
FREM3-202ENST00000508899 METRNQ9UJH8 293 aa8.66□□□□□ -1.02
FREM3-202ENST00000508899 HECW1Q76N89 1606 aa8.65□□□□□ -1.02
FREM3-202ENST00000508899 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.02
FREM3-202ENST00000508899 ADAMTS12P58397 1594 aa8.65□□□□□ -1.02
FREM3-202ENST00000508899 GTF3C3Q9Y5Q9 886 aa8.65□□□□□ -1.02
FREM3-202ENST00000508899 UGGT2Q9NYU1 1516 aa8.64□□□□□ -1.03
FREM3-202ENST00000508899 AKNAQ7Z591 1439 aa8.64□□□□□ -1.03
FREM3-202ENST00000508899 C7P10643 843 aa8.64□□□□□ -1.03
FREM3-202ENST00000508899 TCOF1Q13428 1488 aaKnown RBP8.64□□□□□ -1.03
FREM3-202ENST00000508899 FHOD3Q2V2M9 1422 aa8.63□□□□□ -1.03
FREM3-202ENST00000508899 FGD6Q6ZV73 1430 aa8.63□□□□□ -1.03
FREM3-202ENST00000508899 NESP48681 1621 aa8.63□□□□□ -1.03
FREM3-202ENST00000508899 COLQQ9Y215 455 aaPredicted RBP8.63□□□□□ -1.03
FREM3-202ENST00000508899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
FREM3-202ENST00000508899 POTEJP0CG39 1038 aa8.62□□□□□ -1.03
FREM3-202ENST00000508899 IER5LQ5T953 404 aa8.62□□□□□ -1.03
FREM3-202ENST00000508899 ZFP91Q96JP5 570 aaPredicted RBP8.62□□□□□ -1.03
FREM3-202ENST00000508899 KDM5BQ9UGL1 1544 aa8.62□□□□□ -1.03
FREM3-202ENST00000508899 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
FREM3-202ENST00000508899 HFM1A2PYH4 1435 aa8.62□□□□□ -1.03
FREM3-202ENST00000508899 VGFO15240 615 aaPredicted RBP8.61□□□□□ -1.03
FREM3-202ENST00000508899 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
FREM3-202ENST00000508899 TIMELESSQ9UNS1 1208 aa8.61□□□□□ -1.03
FREM3-202ENST00000508899 GAPVD1Q14C86 1478 aa8.61□□□□□ -1.03
FREM3-202ENST00000508899 LHX8Q68G74 356 aa8.6□□□□□ -1.03
FREM3-202ENST00000508899 WDR62O43379 1518 aa8.59□□□□□ -1.03
FREM3-202ENST00000508899 ILDR1Q86SU0 546 aaPredicted RBP8.59□□□□□ -1.03
FREM3-202ENST00000508899 MYOM3Q5VTT5 1437 aa8.59□□□□□ -1.03
FREM3-202ENST00000508899 IQGAP2Q13576 1575 aa8.59□□□□□ -1.03
FREM3-202ENST00000508899 MAGI3Q5TCQ9 1506 aa8.59□□□□□ -1.03
FREM3-202ENST00000508899 NCOA2Q15596 1464 aa8.58□□□□□ -1.04
FREM3-202ENST00000508899 UACAQ9BZF9 1416 aa8.58□□□□□ -1.04
FREM3-202ENST00000508899 PDS5BQ9NTI5 1447 aa8.58□□□□□ -1.04
FREM3-202ENST00000508899 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
FREM3-202ENST00000508899 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
FREM3-202ENST00000508899 CABP2Q9NPB3 220 aa8.56□□□□□ -1.04
FREM3-202ENST00000508899 NAIPQ13075 1403 aa8.54□□□□□ -1.04
FREM3-202ENST00000508899 RTN4Q9NQC3 1192 aaKnown RBP8.54□□□□□ -1.04
FREM3-202ENST00000508899 ADCY10Q96PN6 1610 aa8.54□□□□□ -1.04
FREM3-202ENST00000508899 PTPRKQ15262 1439 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms