RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 NBPF8Q3BBV2 869 aa19.28■□□□□ 0.68
ATP2C1-214ENST00000508532 PLIN1O60240 522 aa19.27■□□□□ 0.67
ATP2C1-214ENST00000508532 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
ATP2C1-214ENST00000508532 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
ATP2C1-214ENST00000508532 ANO8Q9HCE9 1232 aaPredicted RBP19.25■□□□□ 0.67
ATP2C1-214ENST00000508532 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
ATP2C1-214ENST00000508532 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
ATP2C1-214ENST00000508532 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
ATP2C1-214ENST00000508532 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
ATP2C1-214ENST00000508532 IL27Q8NEV9 243 aa19.24■□□□□ 0.67
ATP2C1-214ENST00000508532 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
ATP2C1-214ENST00000508532 NCOA2Q15596 1464 aa19.22■□□□□ 0.67
ATP2C1-214ENST00000508532 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
ATP2C1-214ENST00000508532 NAIPQ13075 1403 aa19.21■□□□□ 0.67
ATP2C1-214ENST00000508532 CFTRP13569 1480 aa19.2■□□□□ 0.66
ATP2C1-214ENST00000508532 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
ATP2C1-214ENST00000508532 USP47Q96K76 1375 aa19.2■□□□□ 0.66
ATP2C1-214ENST00000508532 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
ATP2C1-214ENST00000508532 PCF11O94913 1555 aaKnown RBP19.18■□□□□ 0.66
ATP2C1-214ENST00000508532 ZNF644Q9H582 1327 aaPredicted RBP19.18■□□□□ 0.66
ATP2C1-214ENST00000508532 RALBP1Q15311 655 aa19.16■□□□□ 0.66
ATP2C1-214ENST00000508532 UPF2Q9HAU5 1272 aaKnown RBP19.15■□□□□ 0.66
ATP2C1-214ENST00000508532 MAP3K1Q13233 1512 aa19.14■□□□□ 0.66
ATP2C1-214ENST00000508532 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
ATP2C1-214ENST00000508532 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
ATP2C1-214ENST00000508532 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
ATP2C1-214ENST00000508532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATP2C1-214ENST00000508532 PTPRKQ15262 1439 aa19.13■□□□□ 0.65
ATP2C1-214ENST00000508532 MYBBP1AQ9BQG0 1328 aaKnown RBP19.12■□□□□ 0.65
ATP2C1-214ENST00000508532 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
ATP2C1-214ENST00000508532 CRBNQ96SW2 442 aa19.12■□□□□ 0.65
ATP2C1-214ENST00000508532 USP35Q9P2H5 1018 aa19.12■□□□□ 0.65
ATP2C1-214ENST00000508532 KNSTRNQ9Y448 316 aa19.11■□□□□ 0.65
ATP2C1-214ENST00000508532 NUP155O75694 1391 aa19.11■□□□□ 0.65
ATP2C1-214ENST00000508532 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
ATP2C1-214ENST00000508532 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
ATP2C1-214ENST00000508532 PNISRQ8TF01 805 aaKnown RBP19.1■□□□□ 0.65
ATP2C1-214ENST00000508532 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
ATP2C1-214ENST00000508532 CDCA7LQ96GN5 454 aa19.1■□□□□ 0.65
ATP2C1-214ENST00000508532 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.652e-7■■■■■ 33.1
ATP2C1-214ENST00000508532 ROCK2O75116 1388 aaKnown RBP19.08■□□□□ 0.64
ATP2C1-214ENST00000508532 SKAP1Q86WV1 359 aa19.07■□□□□ 0.64
ATP2C1-214ENST00000508532 GSE1Q14687 1217 aa19.07■□□□□ 0.64
ATP2C1-214ENST00000508532 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
ATP2C1-214ENST00000508532 NEUROD2Q15784 382 aa19.06■□□□□ 0.64
ATP2C1-214ENST00000508532 BECN1Q14457 450 aa19.06■□□□□ 0.64
ATP2C1-214ENST00000508532 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
ATP2C1-214ENST00000508532 BRPF3Q9ULD4 1205 aa19.04■□□□□ 0.64
ATP2C1-214ENST00000508532 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
ATP2C1-214ENST00000508532 MS4A1P11836 297 aa19.04■□□□□ 0.64
ATP2C1-214ENST00000508532 FRAT1Q92837 279 aaPredicted RBP19.03■□□□□ 0.64
ATP2C1-214ENST00000508532 SLKQ9H2G2 1235 aaPredicted RBP19.03■□□□□ 0.64
ATP2C1-214ENST00000508532 PRKCSHP14314 528 aaPredicted RBP19.03■□□□□ 0.64
ATP2C1-214ENST00000508532 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
ATP2C1-214ENST00000508532 BACH2Q9BYV9 841 aa19.02■□□□□ 0.64
ATP2C1-214ENST00000508532 TMF1P82094 1093 aa19.01■□□□□ 0.63
ATP2C1-214ENST00000508532 NFKBIBQ15653 356 aa19■□□□□ 0.63
ATP2C1-214ENST00000508532 PTPN23Q9H3S7 1636 aa19■□□□□ 0.63
ATP2C1-214ENST00000508532 SPRYD3Q8NCJ5 442 aa19■□□□□ 0.63
ATP2C1-214ENST00000508532 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
ATP2C1-214ENST00000508532 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
ATP2C1-214ENST00000508532 PANK3Q9H999 370 aa18.97■□□□□ 0.63
ATP2C1-214ENST00000508532 HSP90AA1P07900 732 aaKnown RBP18.96■□□□□ 0.63
ATP2C1-214ENST00000508532 CCDC146Q8IYE0 955 aa18.96■□□□□ 0.63
ATP2C1-214ENST00000508532 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
ATP2C1-214ENST00000508532 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
ATP2C1-214ENST00000508532 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
ATP2C1-214ENST00000508532 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
ATP2C1-214ENST00000508532 GOLGA2Q08379 1002 aa18.93■□□□□ 0.62
ATP2C1-214ENST00000508532 HNRNPMP52272 730 aaKnown RBP eCLIP18.92■□□□□ 0.625e-7■■■■■ 28.1
ATP2C1-214ENST00000508532 BRD4O60885 1362 aaPredicted RBP18.92■□□□□ 0.62
ATP2C1-214ENST00000508532 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
ATP2C1-214ENST00000508532 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
ATP2C1-214ENST00000508532 CENPQQ7L2Z9 268 aaPredicted RBP18.92■□□□□ 0.62
ATP2C1-214ENST00000508532 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
ATP2C1-214ENST00000508532 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
ATP2C1-214ENST00000508532 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.62
ATP2C1-214ENST00000508532 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
ATP2C1-214ENST00000508532 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.61
ATP2C1-214ENST00000508532 FRAT2O75474 233 aaPredicted RBP18.88■□□□□ 0.61
ATP2C1-214ENST00000508532 NESP48681 1621 aa18.87■□□□□ 0.61
ATP2C1-214ENST00000508532 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
ATP2C1-214ENST00000508532 CDCA8Q53HL2 280 aa18.86■□□□□ 0.61
ATP2C1-214ENST00000508532 ADAMTS8Q9UP79 889 aa18.84■□□□□ 0.61
ATP2C1-214ENST00000508532 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
ATP2C1-214ENST00000508532 NBPF1Q3BBV0 1214 aa18.83■□□□□ 0.6
ATP2C1-214ENST00000508532 C20orf194Q5TEA3 1177 aa18.83■□□□□ 0.6
ATP2C1-214ENST00000508532 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
ATP2C1-214ENST00000508532 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
ATP2C1-214ENST00000508532 CDK13Q14004 1512 aaKnown RBP18.82■□□□□ 0.6
ATP2C1-214ENST00000508532 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
ATP2C1-214ENST00000508532 MIA2Q96PC5 1412 aa18.81■□□□□ 0.6
ATP2C1-214ENST00000508532 DAPK1P53355 1430 aa18.81■□□□□ 0.6
ATP2C1-214ENST00000508532 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
ATP2C1-214ENST00000508532 TRIM44Q96DX7 344 aaPredicted RBP18.8■□□□□ 0.6
ATP2C1-214ENST00000508532 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
ATP2C1-214ENST00000508532 APAF1O14727 1248 aa18.8■□□□□ 0.6
ATP2C1-214ENST00000508532 L1TD1Q5T7N2 865 aaKnown RBP18.8■□□□□ 0.6
ATP2C1-214ENST00000508532 ANP32BQ92688 251 aaKnown RBP18.8■□□□□ 0.6
ATP2C1-214ENST00000508532 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms