RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
SGCA-206ENST00000508382 CEBPAP49715 358 aaPredicted RBP22.5■■□□□ 1.19
SGCA-206ENST00000508382 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
SGCA-206ENST00000508382 LTBP4Q8N2S1 1624 aa22.49■■□□□ 1.19
SGCA-206ENST00000508382 MAGI2Q86UL8 1455 aa22.48■■□□□ 1.19
SGCA-206ENST00000508382 SETD1BQ9UPS6 1966 aaKnown RBP22.44■■□□□ 1.18
SGCA-206ENST00000508382 DMRT2Q9Y5R5 561 aa22.42■■□□□ 1.18
SGCA-206ENST00000508382 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
SGCA-206ENST00000508382 ATP10AO60312 1499 aa22.4■■□□□ 1.18
SGCA-206ENST00000508382 PTPRTO14522 1441 aa22.4■■□□□ 1.18
SGCA-206ENST00000508382 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.17
SGCA-206ENST00000508382 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
SGCA-206ENST00000508382 C3P01024 1663 aa22.37■■□□□ 1.17
SGCA-206ENST00000508382 SCAPERQ9BY12 1400 aa22.37■■□□□ 1.17
SGCA-206ENST00000508382 PLEKHD1A6NEE1 506 aa22.36■■□□□ 1.17
SGCA-206ENST00000508382 IQSEC2Q5JU85 1478 aa22.34■■□□□ 1.17
SGCA-206ENST00000508382 PLCH2O75038 1416 aa22.3■■□□□ 1.16
SGCA-206ENST00000508382 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
SGCA-206ENST00000508382 MYO5CQ9NQX4 1742 aa22.26■■□□□ 1.15
SGCA-206ENST00000508382 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
SGCA-206ENST00000508382 NCOA1Q15788 1441 aa22.25■■□□□ 1.15
SGCA-206ENST00000508382 KDM5CP41229 1560 aa22.24■■□□□ 1.15
SGCA-206ENST00000508382 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
SGCA-206ENST00000508382 ABCA6Q8N139 1617 aa22.22■■□□□ 1.15
SGCA-206ENST00000508382 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
SGCA-206ENST00000508382 KIF14Q15058 1648 aa22.18■■□□□ 1.14
SGCA-206ENST00000508382 CAMSAP1Q5T5Y3 1602 aa22.18■■□□□ 1.14
SGCA-206ENST00000508382 ZNF518AQ6AHZ1 1483 aa22.17■■□□□ 1.14
SGCA-206ENST00000508382 TRAPPC8Q9Y2L5 1435 aa22.17■■□□□ 1.14
SGCA-206ENST00000508382 AFAP1Q8N556 730 aa22.16■■□□□ 1.14
SGCA-206ENST00000508382 MED1Q15648 1581 aaPredicted RBP22.16■■□□□ 1.14
SGCA-206ENST00000508382 ZNF335Q9H4Z2 1342 aaPredicted RBP22.15■■□□□ 1.14
SGCA-206ENST00000508382 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.13
SGCA-206ENST00000508382 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
SGCA-206ENST00000508382 AGLP35573 1532 aa22.11■■□□□ 1.13
SGCA-206ENST00000508382 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
SGCA-206ENST00000508382 NCKAP5LQ9HCH0 1330 aa22.09■■□□□ 1.13
SGCA-206ENST00000508382 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
SGCA-206ENST00000508382 ARHGAP5Q13017 1502 aa22.07■■□□□ 1.12
SGCA-206ENST00000508382 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
SGCA-206ENST00000508382 MROH2AA6NES4 1674 aa22.06■■□□□ 1.12
SGCA-206ENST00000508382 KIDINS220Q9ULH0 1771 aa22.06■■□□□ 1.12
SGCA-206ENST00000508382 SUPT6HQ7KZ85 1726 aaKnown RBP22.05■■□□□ 1.12
SGCA-206ENST00000508382 ZNF142P52746 1687 aaPredicted RBP22.04■■□□□ 1.12
SGCA-206ENST00000508382 LRRIQ1Q96JM4 1722 aa22.04■■□□□ 1.12
SGCA-206ENST00000508382 HSPA1LP34931 641 aa22.03■■□□□ 1.12
SGCA-206ENST00000508382 ITSN2Q9NZM3 1697 aa22.03■■□□□ 1.12
SGCA-206ENST00000508382 MYT1LQ9UL68 1186 aa22.02■■□□□ 1.12
SGCA-206ENST00000508382 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.11
SGCA-206ENST00000508382 NPATQ14207 1427 aa22.01■■□□□ 1.11
SGCA-206ENST00000508382 CNTLNQ9NXG0 1405 aa22■■□□□ 1.11
SGCA-206ENST00000508382 ABCC1P33527 1531 aa22■■□□□ 1.11
SGCA-206ENST00000508382 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
SGCA-206ENST00000508382 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
SGCA-206ENST00000508382 CLTCQ00610 1675 aaKnown RBP21.97■■□□□ 1.11
SGCA-206ENST00000508382 PLA2R1Q13018 1463 aa21.96■■□□□ 1.11
SGCA-206ENST00000508382 PREX2Q70Z35 1606 aa21.96■■□□□ 1.11
SGCA-206ENST00000508382 CEP170BQ9Y4F5 1589 aaPredicted RBP21.95■■□□□ 1.11
SGCA-206ENST00000508382 ZMYM3Q14202 1370 aa21.95■■□□□ 1.1
SGCA-206ENST00000508382 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
SGCA-206ENST00000508382 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
SGCA-206ENST00000508382 PIP4K2BP78356 416 aa21.91■■□□□ 1.1
SGCA-206ENST00000508382 PKD2Q13563 968 aa21.91■■□□□ 1.1
SGCA-206ENST00000508382 ATP1B4Q9UN42 357 aaPredicted RBP21.9■■□□□ 1.1
SGCA-206ENST00000508382 SCAF1Q9H7N4 1312 aaKnown RBP21.89■■□□□ 1.1
SGCA-206ENST00000508382 CDC42BPAQ5VT25 1732 aa21.89■■□□□ 1.09
SGCA-206ENST00000508382 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
SGCA-206ENST00000508382 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
SGCA-206ENST00000508382 POLR1AO95602 1720 aaPredicted RBP21.86■■□□□ 1.09
SGCA-206ENST00000508382 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
SGCA-206ENST00000508382 NEURL4Q96JN8 1562 aa21.86■■□□□ 1.09
SGCA-206ENST00000508382 DNMT1P26358 1616 aaKnown RBP21.84■■□□□ 1.09
SGCA-206ENST00000508382 FMN1Q68DA7 1419 aa21.84■■□□□ 1.09
SGCA-206ENST00000508382 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
SGCA-206ENST00000508382 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.09
SGCA-206ENST00000508382 PLXNC1O60486 1568 aa21.82■■□□□ 1.08
SGCA-206ENST00000508382 CLIP1P30622 1438 aa21.82■■□□□ 1.08
SGCA-206ENST00000508382 EEA1Q15075 1411 aa21.81■■□□□ 1.08
SGCA-206ENST00000508382 CPS1P31327 1500 aa21.81■■□□□ 1.08
SGCA-206ENST00000508382 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
SGCA-206ENST00000508382 SHANK2Q9UPX8 1470 aa21.79■■□□□ 1.08
SGCA-206ENST00000508382 TOM1O60784 492 aa21.79■■□□□ 1.08
SGCA-206ENST00000508382 VWDEQ8N2E2 1590 aa21.78■■□□□ 1.08
SGCA-206ENST00000508382 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.07
SGCA-206ENST00000508382 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
SGCA-206ENST00000508382 INO80Q9ULG1 1556 aaPredicted RBP21.75■■□□□ 1.07
SGCA-206ENST00000508382 STRCP1A6NGW2 1772 aa21.74■■□□□ 1.07
SGCA-206ENST00000508382 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
SGCA-206ENST00000508382 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
SGCA-206ENST00000508382 A2MP01023 1474 aa21.71■■□□□ 1.07
SGCA-206ENST00000508382 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
SGCA-206ENST00000508382 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
SGCA-206ENST00000508382 GGT6Q6P531 493 aa21.68■■□□□ 1.06
SGCA-206ENST00000508382 HNRNPMP52272 730 aaKnown RBP eCLIP21.67■■□□□ 1.06
SGCA-206ENST00000508382 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
SGCA-206ENST00000508382 ZNF777Q9ULD5 760 aaPredicted RBP21.66■■□□□ 1.06
SGCA-206ENST00000508382 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
SGCA-206ENST00000508382 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
SGCA-206ENST00000508382 FBXO31Q5XUX0 539 aaPredicted RBP21.61■■□□□ 1.05
SGCA-206ENST00000508382 RNF17Q9BXT8 1623 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms