RNA–Protein interactions for RNA: ENST00000507550.5

CASP6-206, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 892 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-206ENST00000507550 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.13
CASP6-206ENST00000507550 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.13
CASP6-206ENST00000507550 MAGI2Q86UL8 1455 aa22.14■■□□□ 1.13
CASP6-206ENST00000507550 HECW1Q76N89 1606 aa22.12■■□□□ 1.13
CASP6-206ENST00000507550 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
CASP6-206ENST00000507550 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
CASP6-206ENST00000507550 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
CASP6-206ENST00000507550 SCAPERQ9BY12 1400 aa22.08■■□□□ 1.13
CASP6-206ENST00000507550 ARHGEF12Q9NZN5 1544 aa22.08■■□□□ 1.13
CASP6-206ENST00000507550 ATP10AO60312 1499 aa22.04■■□□□ 1.12
CASP6-206ENST00000507550 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
CASP6-206ENST00000507550 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
CASP6-206ENST00000507550 PLCH2O75038 1416 aa22.03■■□□□ 1.12
CASP6-206ENST00000507550 C9orf84Q5VXU9 1444 aa22.03■■□□□ 1.12
CASP6-206ENST00000507550 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
CASP6-206ENST00000507550 CDK13Q14004 1512 aaKnown RBP22■■□□□ 1.11
CASP6-206ENST00000507550 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
CASP6-206ENST00000507550 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
CASP6-206ENST00000507550 EFCAB2Q5VUJ9 269 aa21.93■■□□□ 1.1
CASP6-206ENST00000507550 PTPRTO14522 1441 aa21.91■■□□□ 1.1
CASP6-206ENST00000507550 AFAP1Q8N556 730 aa21.9■■□□□ 1.1
CASP6-206ENST00000507550 ZNF518AQ6AHZ1 1483 aa21.89■■□□□ 1.09
CASP6-206ENST00000507550 LTBP4Q8N2S1 1624 aa21.88■■□□□ 1.09
CASP6-206ENST00000507550 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
CASP6-206ENST00000507550 KDM5CP41229 1560 aa21.85■■□□□ 1.09
CASP6-206ENST00000507550 ATP1B4Q9UN42 357 aaPredicted RBP21.84■■□□□ 1.09
CASP6-206ENST00000507550 MYO5CQ9NQX4 1742 aa21.83■■□□□ 1.09
CASP6-206ENST00000507550 SETD1BQ9UPS6 1966 aaKnown RBP21.83■■□□□ 1.09
CASP6-206ENST00000507550 DIP2CQ9Y2E4 1556 aa21.83■■□□□ 1.09
CASP6-206ENST00000507550 EEA1Q15075 1411 aa21.83■■□□□ 1.09
CASP6-206ENST00000507550 KIF14Q15058 1648 aa21.81■■□□□ 1.08
CASP6-206ENST00000507550 C3P01024 1663 aa21.81■■□□□ 1.08
CASP6-206ENST00000507550 ARHGAP5Q13017 1502 aa21.8■■□□□ 1.08
CASP6-206ENST00000507550 IQSEC2Q5JU85 1478 aa21.8■■□□□ 1.08
CASP6-206ENST00000507550 NCOA1Q15788 1441 aa21.8■■□□□ 1.08
CASP6-206ENST00000507550 TRAPPC8Q9Y2L5 1435 aa21.8■■□□□ 1.08
CASP6-206ENST00000507550 REREQ9P2R6 1566 aa21.79■■□□□ 1.08
CASP6-206ENST00000507550 ESF1Q9H501 851 aaKnown RBP21.78■■□□□ 1.08
CASP6-206ENST00000507550 CDK11AQ9UQ88 783 aaPredicted RBP21.78■■□□□ 1.08
CASP6-206ENST00000507550 ABCA6Q8N139 1617 aa21.77■■□□□ 1.08
CASP6-206ENST00000507550 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.07
CASP6-206ENST00000507550 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
CASP6-206ENST00000507550 FMN1Q68DA7 1419 aa21.75■■□□□ 1.07
CASP6-206ENST00000507550 AGLP35573 1532 aa21.75■■□□□ 1.07
CASP6-206ENST00000507550 ZNF335Q9H4Z2 1342 aaPredicted RBP21.7■■□□□ 1.06
CASP6-206ENST00000507550 CLIP1P30622 1438 aa21.7■■□□□ 1.06
CASP6-206ENST00000507550 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
CASP6-206ENST00000507550 CNTLNQ9NXG0 1405 aa21.69■■□□□ 1.06
CASP6-206ENST00000507550 UBAP1LF5GYI3 381 aa21.68■■□□□ 1.06
CASP6-206ENST00000507550 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
CASP6-206ENST00000507550 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
CASP6-206ENST00000507550 ARHGAP35Q9NRY4 1499 aa21.68■■□□□ 1.06
CASP6-206ENST00000507550 ABCC1P33527 1531 aa21.66■■□□□ 1.06
CASP6-206ENST00000507550 CDC42BPBQ9Y5S2 1711 aa21.66■■□□□ 1.06
CASP6-206ENST00000507550 NPATQ14207 1427 aa21.65■■□□□ 1.06
CASP6-206ENST00000507550 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
CASP6-206ENST00000507550 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
CASP6-206ENST00000507550 KIDINS220Q9ULH0 1771 aa21.62■■□□□ 1.05
CASP6-206ENST00000507550 PREX2Q70Z35 1606 aa21.6■■□□□ 1.05
CASP6-206ENST00000507550 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
CASP6-206ENST00000507550 LRRIQ1Q96JM4 1722 aa21.58■■□□□ 1.05
CASP6-206ENST00000507550 PKD2Q13563 968 aa21.57■■□□□ 1.04
CASP6-206ENST00000507550 MROH2AA6NES4 1674 aa21.56■■□□□ 1.04
CASP6-206ENST00000507550 PLA2R1Q13018 1463 aa21.56■■□□□ 1.04
CASP6-206ENST00000507550 TCOF1Q13428 1488 aaKnown RBP21.55■■□□□ 1.04
CASP6-206ENST00000507550 SAMD9LQ8IVG5 1584 aa21.54■■□□□ 1.04
CASP6-206ENST00000507550 MYO3AQ8NEV4 1616 aa21.52■■□□□ 1.04
CASP6-206ENST00000507550 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
CASP6-206ENST00000507550 HSPA1LP34931 641 aa21.51■■□□□ 1.03
CASP6-206ENST00000507550 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
CASP6-206ENST00000507550 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
CASP6-206ENST00000507550 CEP170BQ9Y4F5 1589 aaPredicted RBP21.51■■□□□ 1.03
CASP6-206ENST00000507550 SPAG9O60271 1321 aaKnown RBP21.51■■□□□ 1.03
CASP6-206ENST00000507550 ZNF142P52746 1687 aaPredicted RBP21.5■■□□□ 1.03
CASP6-206ENST00000507550 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
CASP6-206ENST00000507550 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
CASP6-206ENST00000507550 CLTCQ00610 1675 aaKnown RBP21.48■■□□□ 1.03
CASP6-206ENST00000507550 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
CASP6-206ENST00000507550 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
CASP6-206ENST00000507550 SUPT6HQ7KZ85 1726 aaKnown RBP21.48■■□□□ 1.03
CASP6-206ENST00000507550 SYCP2Q9BX26 1530 aa21.48■■□□□ 1.03
CASP6-206ENST00000507550 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
CASP6-206ENST00000507550 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
CASP6-206ENST00000507550 GGT6Q6P531 493 aa21.46■■□□□ 1.03
CASP6-206ENST00000507550 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
CASP6-206ENST00000507550 A2MP01023 1474 aa21.45■■□□□ 1.02
CASP6-206ENST00000507550 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
CASP6-206ENST00000507550 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
CASP6-206ENST00000507550 GPATCH8Q9UKJ3 1502 aaKnown RBP21.42■■□□□ 1.02
CASP6-206ENST00000507550 TOM1O60784 492 aa21.41■■□□□ 1.02
CASP6-206ENST00000507550 INO80Q9ULG1 1556 aaPredicted RBP21.4■■□□□ 1.02
CASP6-206ENST00000507550 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.02
CASP6-206ENST00000507550 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
CASP6-206ENST00000507550 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
CASP6-206ENST00000507550 CPS1P31327 1500 aa21.37■■□□□ 1.01
CASP6-206ENST00000507550 ADRA2BP18089 450 aa21.36■■□□□ 1.01
CASP6-206ENST00000507550 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
CASP6-206ENST00000507550 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
CASP6-206ENST00000507550 NEURL4Q96JN8 1562 aa21.34■■□□□ 1.01
CASP6-206ENST00000507550 PLEKHH2Q8IVE3 1493 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms