RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 ANP32CO43423 234 aa18.34■□□□□ 0.53
SPDL1-206ENST00000507232 CDK11AQ9UQ88 783 aaPredicted RBP18.33■□□□□ 0.52
SPDL1-206ENST00000507232 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
SPDL1-206ENST00000507232 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
SPDL1-206ENST00000507232 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
SPDL1-206ENST00000507232 HSPA5P11021 654 aaKnown RBP18.3■□□□□ 0.52
SPDL1-206ENST00000507232 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
SPDL1-206ENST00000507232 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
SPDL1-206ENST00000507232 AKNAQ7Z591 1439 aa18.28■□□□□ 0.52
SPDL1-206ENST00000507232 KIF14Q15058 1648 aa18.28■□□□□ 0.52
SPDL1-206ENST00000507232 DNMT1P26358 1616 aaKnown RBP18.28■□□□□ 0.52
SPDL1-206ENST00000507232 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
SPDL1-206ENST00000507232 TROQ12816 1431 aaPredicted RBP18.26■□□□□ 0.51
SPDL1-206ENST00000507232 CAMSAP2Q08AD1 1489 aa18.25■□□□□ 0.51
SPDL1-206ENST00000507232 BCANQ96GW7 911 aa18.23■□□□□ 0.51
SPDL1-206ENST00000507232 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
SPDL1-206ENST00000507232 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
SPDL1-206ENST00000507232 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
SPDL1-206ENST00000507232 GPATCH8Q9UKJ3 1502 aaKnown RBP18.22■□□□□ 0.51
SPDL1-206ENST00000507232 NBPF8Q3BBV2 869 aa18.21■□□□□ 0.51
SPDL1-206ENST00000507232 NUP160Q12769 1436 aa18.2■□□□□ 0.5
SPDL1-206ENST00000507232 ANKRD30BQ9BXX2 1392 aa18.2■□□□□ 0.5
SPDL1-206ENST00000507232 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
SPDL1-206ENST00000507232 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
SPDL1-206ENST00000507232 C11orf95C9JLR9 678 aaPredicted RBP18.18■□□□□ 0.5
SPDL1-206ENST00000507232 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
SPDL1-206ENST00000507232 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
SPDL1-206ENST00000507232 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
SPDL1-206ENST00000507232 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
SPDL1-206ENST00000507232 FKBP8Q14318 412 aa18.14■□□□□ 0.5
SPDL1-206ENST00000507232 RPRD2Q5VT52 1461 aaKnown RBP18.14■□□□□ 0.49
SPDL1-206ENST00000507232 ATP10BO94823 1461 aa18.14■□□□□ 0.49
SPDL1-206ENST00000507232 PZPP20742 1482 aa18.14■□□□□ 0.49
SPDL1-206ENST00000507232 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
SPDL1-206ENST00000507232 PKD2Q13563 968 aa18.11■□□□□ 0.49
SPDL1-206ENST00000507232 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
SPDL1-206ENST00000507232 ABCA8O94911 1581 aa18.11■□□□□ 0.49
SPDL1-206ENST00000507232 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
SPDL1-206ENST00000507232 ADGBQ8N7X0 1667 aa18.11■□□□□ 0.49
SPDL1-206ENST00000507232 HNRNPMP52272 730 aaKnown RBP eCLIP18.11■□□□□ 0.49
SPDL1-206ENST00000507232 CDC42BPAQ5VT25 1732 aa18.1■□□□□ 0.49
SPDL1-206ENST00000507232 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
SPDL1-206ENST00000507232 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
SPDL1-206ENST00000507232 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
SPDL1-206ENST00000507232 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
SPDL1-206ENST00000507232 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
SPDL1-206ENST00000507232 PTPRGP23470 1445 aa18.06■□□□□ 0.48
SPDL1-206ENST00000507232 ABCC10Q5T3U5 1492 aa18.06■□□□□ 0.48
SPDL1-206ENST00000507232 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
SPDL1-206ENST00000507232 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
SPDL1-206ENST00000507232 C9orf84Q5VXU9 1444 aa18.04■□□□□ 0.48
SPDL1-206ENST00000507232 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
SPDL1-206ENST00000507232 ADGRL2O95490 1459 aa18.03■□□□□ 0.48
SPDL1-206ENST00000507232 KIAA1107Q9UPP5 1409 aa18.03■□□□□ 0.48
SPDL1-206ENST00000507232 NUP155O75694 1391 aa18.03■□□□□ 0.48
SPDL1-206ENST00000507232 TSPY4P0CV99 314 aa18.02■□□□□ 0.48
SPDL1-206ENST00000507232 TSPY10P0CW01 314 aa18.02■□□□□ 0.48
SPDL1-206ENST00000507232 CHD1O14646 1710 aa18.01■□□□□ 0.47
SPDL1-206ENST00000507232 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
SPDL1-206ENST00000507232 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
SPDL1-206ENST00000507232 NEFLP07196 543 aa17.99■□□□□ 0.47
SPDL1-206ENST00000507232 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
SPDL1-206ENST00000507232 KIF15Q9NS87 1388 aa17.97■□□□□ 0.47
SPDL1-206ENST00000507232 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
SPDL1-206ENST00000507232 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
SPDL1-206ENST00000507232 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
SPDL1-206ENST00000507232 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
SPDL1-206ENST00000507232 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
SPDL1-206ENST00000507232 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
SPDL1-206ENST00000507232 SAMD9LQ8IVG5 1584 aa17.93■□□□□ 0.46
SPDL1-206ENST00000507232 USP47Q96K76 1375 aa17.93■□□□□ 0.46
SPDL1-206ENST00000507232 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
SPDL1-206ENST00000507232 MBD5Q9P267 1494 aa17.93■□□□□ 0.46
SPDL1-206ENST00000507232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
SPDL1-206ENST00000507232 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
SPDL1-206ENST00000507232 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
SPDL1-206ENST00000507232 BCORL1Q5H9F3 1711 aa17.91■□□□□ 0.46
SPDL1-206ENST00000507232 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
SPDL1-206ENST00000507232 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.46
SPDL1-206ENST00000507232 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
SPDL1-206ENST00000507232 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
SPDL1-206ENST00000507232 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
SPDL1-206ENST00000507232 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
SPDL1-206ENST00000507232 PREX2Q70Z35 1606 aa17.88■□□□□ 0.45
SPDL1-206ENST00000507232 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
SPDL1-206ENST00000507232 ARHGEF5Q12774 1597 aa17.85■□□□□ 0.45
SPDL1-206ENST00000507232 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
SPDL1-206ENST00000507232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.85■□□□□ 0.45
SPDL1-206ENST00000507232 KDM5CP41229 1560 aa17.84■□□□□ 0.45
SPDL1-206ENST00000507232 ST20-MTHFSA0A0A6YYL1 179 aa17.82■□□□□ 0.44
SPDL1-206ENST00000507232 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
SPDL1-206ENST00000507232 SHROOM2Q13796 1616 aa17.81■□□□□ 0.44
SPDL1-206ENST00000507232 KDM5DQ9BY66 1539 aa17.81■□□□□ 0.44
SPDL1-206ENST00000507232 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
SPDL1-206ENST00000507232 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
SPDL1-206ENST00000507232 ABCC2Q92887 1545 aa17.78■□□□□ 0.44
SPDL1-206ENST00000507232 UHRF1BP1Q6BDS2 1440 aa17.78■□□□□ 0.44
SPDL1-206ENST00000507232 PLEKHH2Q8IVE3 1493 aa17.77■□□□□ 0.44
SPDL1-206ENST00000507232 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.43
SPDL1-206ENST00000507232 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms