RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 PPRC1Q5VV67 1664 aaKnown RBP8.18□□□□□ -1.1
CPNE4-207ENST00000506687 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
CPNE4-207ENST00000506687 HSPA2P54652 639 aa8.17□□□□□ -1.1
CPNE4-207ENST00000506687 RANGAP1P46060 587 aaPredicted RBP8.16□□□□□ -1.1
CPNE4-207ENST00000506687 IGF1RP08069 1367 aa8.15□□□□□ -1.1
CPNE4-207ENST00000506687 ABCC2Q92887 1545 aa8.14□□□□□ -1.11
CPNE4-207ENST00000506687 KIF27Q86VH2 1401 aa8.14□□□□□ -1.11
CPNE4-207ENST00000506687 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
CPNE4-207ENST00000506687 ERICH3Q5RHP9 1530 aa8.13□□□□□ -1.11
CPNE4-207ENST00000506687 RUSC2Q8N2Y8 1516 aa8.13□□□□□ -1.11
CPNE4-207ENST00000506687 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
CPNE4-207ENST00000506687 PTPRGP23470 1445 aa8.12□□□□□ -1.11
CPNE4-207ENST00000506687 KIAA0586Q9BVV6 1533 aa8.12□□□□□ -1.11
CPNE4-207ENST00000506687 MAP3K4Q9Y6R4 1608 aa8.1□□□□□ -1.11
CPNE4-207ENST00000506687 ADAMTSL3P82987 1691 aa8.09□□□□□ -1.11
CPNE4-207ENST00000506687 APLP2Q06481 763 aa8.09□□□□□ -1.11
CPNE4-207ENST00000506687 PLCD3Q8N3E9 789 aa8.08□□□□□ -1.12
CPNE4-207ENST00000506687 CIZ1Q9ULV3 898 aaPredicted RBP8.08□□□□□ -1.12
CPNE4-207ENST00000506687 CARMIL1Q5VZK9 1371 aa8.08□□□□□ -1.12
CPNE4-207ENST00000506687 KIF21BO75037 1637 aa8.07□□□□□ -1.12
CPNE4-207ENST00000506687 UHRF1BP1LA0JNW5 1464 aa8.06□□□□□ -1.12
CPNE4-207ENST00000506687 YEATS2Q9ULM3 1422 aa8.05□□□□□ -1.12
CPNE4-207ENST00000506687 MAGI3Q5TCQ9 1506 aa8.05□□□□□ -1.12
CPNE4-207ENST00000506687 IQSEC2Q5JU85 1478 aa8.05□□□□□ -1.12
CPNE4-207ENST00000506687 PRXQ9BXM0 1461 aa8.05□□□□□ -1.12
CPNE4-207ENST00000506687 CUL7Q14999 1698 aa8.05□□□□□ -1.12
CPNE4-207ENST00000506687 ARID4BQ4LE39 1312 aaPredicted RBP8.04□□□□□ -1.12
CPNE4-207ENST00000506687 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
CPNE4-207ENST00000506687 EEA1Q15075 1411 aa8.04□□□□□ -1.12
CPNE4-207ENST00000506687 HS6ST3Q8IZP7 471 aa8.04□□□□□ -1.12
CPNE4-207ENST00000506687 TNIKQ9UKE5 1360 aa8.04□□□□□ -1.12
CPNE4-207ENST00000506687 CD109Q6YHK3 1445 aa8.03□□□□□ -1.12
CPNE4-207ENST00000506687 UACAQ9BZF9 1416 aa8.03□□□□□ -1.12
CPNE4-207ENST00000506687 RAPGEF2Q9Y4G8 1499 aa8.02□□□□□ -1.13
CPNE4-207ENST00000506687 KDM5BQ9UGL1 1544 aa8.02□□□□□ -1.13
CPNE4-207ENST00000506687 MADDQ8WXG6 1647 aa8.01□□□□□ -1.13
CPNE4-207ENST00000506687 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
CPNE4-207ENST00000506687 CARMIL2Q6F5E8 1435 aa8.01□□□□□ -1.13
CPNE4-207ENST00000506687 ARAP3Q8WWN8 1544 aa8□□□□□ -1.13
CPNE4-207ENST00000506687 MIER1Q8N108 512 aa8□□□□□ -1.13
CPNE4-207ENST00000506687 FAM9AQ8IZU1 332 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-207ENST00000506687 WDR7Q9Y4E6 1490 aa7.99□□□□□ -1.13
CPNE4-207ENST00000506687 BCORL1Q5H9F3 1711 aa7.98□□□□□ -1.13
CPNE4-207ENST00000506687 MED1Q15648 1581 aaPredicted RBP7.98□□□□□ -1.13
CPNE4-207ENST00000506687 PTPRTO14522 1441 aa7.98□□□□□ -1.13
CPNE4-207ENST00000506687 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
CPNE4-207ENST00000506687 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
CPNE4-207ENST00000506687 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-207ENST00000506687 POLA2Q14181 598 aa7.97□□□□□ -1.13
CPNE4-207ENST00000506687 NKX1-1Q15270 411 aaPredicted RBP7.97□□□□□ -1.13
CPNE4-207ENST00000506687 GTPBP6O43824 516 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-207ENST00000506687 LTBP4Q8N2S1 1624 aa7.96□□□□□ -1.14
CPNE4-207ENST00000506687 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
CPNE4-207ENST00000506687 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
CPNE4-207ENST00000506687 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
CPNE4-207ENST00000506687 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
CPNE4-207ENST00000506687 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
CPNE4-207ENST00000506687 HSPA1LP34931 641 aa7.93□□□□□ -1.14
CPNE4-207ENST00000506687 RIMS1Q86UR5 1692 aaKnown RBP7.92□□□□□ -1.14
CPNE4-207ENST00000506687 UGGT2Q9NYU1 1516 aa7.92□□□□□ -1.14
CPNE4-207ENST00000506687 IQGAP2Q13576 1575 aa7.92□□□□□ -1.14
CPNE4-207ENST00000506687 TRIM26Q12899 539 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-207ENST00000506687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.91□□□□□ -1.14
CPNE4-207ENST00000506687 CFAP43Q8NDM7 1665 aa7.91□□□□□ -1.14
CPNE4-207ENST00000506687 ZCCHC11Q5TAX3 1644 aaKnown RBP7.9□□□□□ -1.14
CPNE4-207ENST00000506687 DISP1Q96F81 1524 aa7.9□□□□□ -1.14
CPNE4-207ENST00000506687 NEUROD2Q15784 382 aa7.9□□□□□ -1.14
CPNE4-207ENST00000506687 NPM2Q86SE8 214 aaKnown RBP7.9□□□□□ -1.14
CPNE4-207ENST00000506687 RNF25Q96BH1 459 aaPredicted RBP7.9□□□□□ -1.14
CPNE4-207ENST00000506687 CTTNBP2Q8WZ74 1663 aa7.89□□□□□ -1.15
CPNE4-207ENST00000506687 GOLGA3Q08378 1498 aa7.89□□□□□ -1.15
CPNE4-207ENST00000506687 UHRF1BP1Q6BDS2 1440 aa7.89□□□□□ -1.15
CPNE4-207ENST00000506687 P3H3Q8IVL6 736 aa7.88□□□□□ -1.15
CPNE4-207ENST00000506687 FANCAO15360 1455 aa7.87□□□□□ -1.15
CPNE4-207ENST00000506687 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
CPNE4-207ENST00000506687 NEO1Q92859 1461 aa7.86□□□□□ -1.15
CPNE4-207ENST00000506687 AKNAQ7Z591 1439 aa7.86□□□□□ -1.15
CPNE4-207ENST00000506687 TTC37Q6PGP7 1564 aa7.85□□□□□ -1.15
CPNE4-207ENST00000506687 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
CPNE4-207ENST00000506687 CEBPAP49715 358 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-207ENST00000506687 PIP4K2BP78356 416 aa7.85□□□□□ -1.15
CPNE4-207ENST00000506687 MLECQ14165 292 aa7.85□□□□□ -1.15
CPNE4-207ENST00000506687 ZBTB47Q9UFB7 747 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-207ENST00000506687 KIAA0556O60303 1618 aa7.85□□□□□ -1.15
CPNE4-207ENST00000506687 SAMD9Q5K651 1589 aa7.84□□□□□ -1.15
CPNE4-207ENST00000506687 ARHGEF40Q8TER5 1519 aa7.84□□□□□ -1.15
CPNE4-207ENST00000506687 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
CPNE4-207ENST00000506687 TOM1O60784 492 aa7.84□□□□□ -1.15
CPNE4-207ENST00000506687 PLEKHG5O94827 1062 aa7.84□□□□□ -1.15
CPNE4-207ENST00000506687 ZNF692Q9BU19 519 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-207ENST00000506687 RGS17Q9UGC6 210 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-207ENST00000506687 ZNF335Q9H4Z2 1342 aaPredicted RBP7.83□□□□□ -1.16
CPNE4-207ENST00000506687 STK25O00506 426 aa7.83□□□□□ -1.16
CPNE4-207ENST00000506687 SPINK5Q9NQ38 1064 aaPredicted RBP7.83□□□□□ -1.16
CPNE4-207ENST00000506687 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
CPNE4-207ENST00000506687 HRCP23327 699 aa7.82□□□□□ -1.16
CPNE4-207ENST00000506687 FRMPD1Q5SYB0 1578 aa7.82□□□□□ -1.16
CPNE4-207ENST00000506687 ARHGAP35Q9NRY4 1499 aa7.81□□□□□ -1.16
CPNE4-207ENST00000506687 NCOA1Q15788 1441 aa7.81□□□□□ -1.16
CPNE4-207ENST00000506687 KCNV2Q8TDN2 545 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms