RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 MAP3K13O43283 966 aa11.67□□□□□ -0.54
SMAD5-201ENST00000506223 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
SMAD5-201ENST00000506223 RYDENQ9NUL5 291 aaKnown RBP11.67□□□□□ -0.54
SMAD5-201ENST00000506223 POLA1P09884 1462 aaPredicted RBP11.67□□□□□ -0.54
SMAD5-201ENST00000506223 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
SMAD5-201ENST00000506223 PSEN1P49768 467 aa11.66□□□□□ -0.54
SMAD5-201ENST00000506223 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
SMAD5-201ENST00000506223 TDRD9Q8NDG6 1382 aaKnown RBP11.66□□□□□ -0.54
SMAD5-201ENST00000506223 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
SMAD5-201ENST00000506223 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
SMAD5-201ENST00000506223 CHMP7Q8WUX9 453 aaPredicted RBP11.63□□□□□ -0.55
SMAD5-201ENST00000506223 BCANQ96GW7 911 aa11.63□□□□□ -0.55
SMAD5-201ENST00000506223 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
SMAD5-201ENST00000506223 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
SMAD5-201ENST00000506223 MAGI1Q96QZ7 1491 aaPredicted RBP11.6□□□□□ -0.55
SMAD5-201ENST00000506223 SOGA1O94964 1423 aa11.59□□□□□ -0.55
SMAD5-201ENST00000506223 KDM4FA0A1W2PPD8 638 aa11.58□□□□□ -0.56
SMAD5-201ENST00000506223 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
SMAD5-201ENST00000506223 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
SMAD5-201ENST00000506223 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
SMAD5-201ENST00000506223 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
SMAD5-201ENST00000506223 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
SMAD5-201ENST00000506223 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
SMAD5-201ENST00000506223 MFRPQ9BY79 579 aa11.53□□□□□ -0.56
SMAD5-201ENST00000506223 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
SMAD5-201ENST00000506223 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
SMAD5-201ENST00000506223 CEP170Q5SW79 1584 aa11.49□□□□□ -0.57
SMAD5-201ENST00000506223 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
SMAD5-201ENST00000506223 SOX12O15370 315 aa11.46□□□□□ -0.57
SMAD5-201ENST00000506223 NLRP6P59044 892 aa11.46□□□□□ -0.57
SMAD5-201ENST00000506223 CUX1P39880 1505 aa11.45□□□□□ -0.58
SMAD5-201ENST00000506223 KDM6BO15054 1643 aa11.45□□□□□ -0.58
SMAD5-201ENST00000506223 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
SMAD5-201ENST00000506223 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
SMAD5-201ENST00000506223 TMEM106CQ9BVX2 250 aa11.44□□□□□ -0.58
SMAD5-201ENST00000506223 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
SMAD5-201ENST00000506223 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
SMAD5-201ENST00000506223 TSPOAP1O95153 1857 aa11.43□□□□□ -0.58
SMAD5-201ENST00000506223 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
SMAD5-201ENST00000506223 GRIN2AQ12879 1464 aa11.42□□□□□ -0.58
SMAD5-201ENST00000506223 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
SMAD5-201ENST00000506223 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
SMAD5-201ENST00000506223 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
SMAD5-201ENST00000506223 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
SMAD5-201ENST00000506223 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
SMAD5-201ENST00000506223 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
SMAD5-201ENST00000506223 HAX1O00165 279 aa11.39□□□□□ -0.59
SMAD5-201ENST00000506223 PPP1R37O75864 691 aa11.39□□□□□ -0.59
SMAD5-201ENST00000506223 NUP160Q12769 1436 aa11.39□□□□□ -0.59
SMAD5-201ENST00000506223 NBR1Q14596 966 aa11.39□□□□□ -0.59
SMAD5-201ENST00000506223 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
SMAD5-201ENST00000506223 TIE1P35590 1138 aa11.37□□□□□ -0.59
SMAD5-201ENST00000506223 MAPKBP1O60336 1514 aa11.35□□□□□ -0.59
SMAD5-201ENST00000506223 ADGRL1O94910 1474 aa11.35□□□□□ -0.59
SMAD5-201ENST00000506223 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
SMAD5-201ENST00000506223 TTLL13PA6NNM8 815 aa11.34□□□□□ -0.59
SMAD5-201ENST00000506223 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
SMAD5-201ENST00000506223 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
SMAD5-201ENST00000506223 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
SMAD5-201ENST00000506223 EVX2Q03828 476 aa11.33□□□□□ -0.6
SMAD5-201ENST00000506223 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
SMAD5-201ENST00000506223 PRG4Q92954 1404 aaPredicted RBP11.33□□□□□ -0.6
SMAD5-201ENST00000506223 ADCY10Q96PN6 1610 aa11.32□□□□□ -0.6
SMAD5-201ENST00000506223 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
SMAD5-201ENST00000506223 CLCN6P51797 869 aa11.3□□□□□ -0.6
SMAD5-201ENST00000506223 P3H3Q8IVL6 736 aa11.3□□□□□ -0.6
SMAD5-201ENST00000506223 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SMAD5-201ENST00000506223 FBXO41Q8TF61 875 aa11.28□□□□□ -0.6
SMAD5-201ENST00000506223 PPRC1Q5VV67 1664 aaKnown RBP11.27□□□□□ -0.6
SMAD5-201ENST00000506223 TRIM35Q9UPQ4 493 aa11.26□□□□□ -0.61
SMAD5-201ENST00000506223 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
SMAD5-201ENST00000506223 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
SMAD5-201ENST00000506223 JPH4Q96JJ6 628 aa11.25□□□□□ -0.61
SMAD5-201ENST00000506223 KCNV2Q8TDN2 545 aa11.24□□□□□ -0.61
SMAD5-201ENST00000506223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.617e-7■□□□□ 11
SMAD5-201ENST00000506223 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
SMAD5-201ENST00000506223 RUSC2Q8N2Y8 1516 aa11.22□□□□□ -0.61
SMAD5-201ENST00000506223 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
SMAD5-201ENST00000506223 COL17A1Q9UMD9 1497 aaPredicted RBP11.19□□□□□ -0.62
SMAD5-201ENST00000506223 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
SMAD5-201ENST00000506223 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
SMAD5-201ENST00000506223 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
SMAD5-201ENST00000506223 PDE4AP27815 886 aa11.17□□□□□ -0.62
SMAD5-201ENST00000506223 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
SMAD5-201ENST00000506223 LMTK3Q96Q04 1460 aa11.17□□□□□ -0.62
SMAD5-201ENST00000506223 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
SMAD5-201ENST00000506223 E2F4Q16254 413 aa11.16□□□□□ -0.62
SMAD5-201ENST00000506223 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
SMAD5-201ENST00000506223 CRISPLD2Q9H0B8 497 aa11.16□□□□□ -0.62
SMAD5-201ENST00000506223 GLI2P10070 1586 aa11.15□□□□□ -0.62
SMAD5-201ENST00000506223 MFSD10Q14728 455 aa11.14□□□□□ -0.63
SMAD5-201ENST00000506223 GABBR2O75899 941 aa11.13□□□□□ -0.63
SMAD5-201ENST00000506223 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
SMAD5-201ENST00000506223 PDCD7Q8N8D1 485 aaKnown RBP11.13□□□□□ -0.63
SMAD5-201ENST00000506223 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
SMAD5-201ENST00000506223 BIVM-ERCC5R4GMW8 1640 aa11.13□□□□□ -0.63
SMAD5-201ENST00000506223 CUL7Q14999 1698 aa11.12□□□□□ -0.63
SMAD5-201ENST00000506223 IER5LQ5T953 404 aa11.12□□□□□ -0.63
SMAD5-201ENST00000506223 POTEHQ6S545 545 aa11.12□□□□□ -0.63
SMAD5-201ENST00000506223 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms