RNA–Protein interactions for RNA: ENST00000506024.5

PDE4D-214, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-214ENST00000506024 CEP164Q9UPV0 1460 aa8.22□□□□□ -1.09
PDE4D-214ENST00000506024 POTEFA5A3E0 1075 aa8.21□□□□□ -1.1
PDE4D-214ENST00000506024 NLRP6P59044 892 aa8.21□□□□□ -1.1
PDE4D-214ENST00000506024 MROH2BQ7Z745 1585 aa8.21□□□□□ -1.1
PDE4D-214ENST00000506024 RIMBP3CA6NJZ7 1639 aa8.2□□□□□ -1.1
PDE4D-214ENST00000506024 RIMBP3BA6NNM3 1639 aa8.2□□□□□ -1.1
PDE4D-214ENST00000506024 RIMBP3Q9UFD9 1639 aa8.2□□□□□ -1.1
PDE4D-214ENST00000506024 LHX8Q68G74 356 aa8.18□□□□□ -1.1
PDE4D-214ENST00000506024 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
PDE4D-214ENST00000506024 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
PDE4D-214ENST00000506024 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
PDE4D-214ENST00000506024 FANCD2Q9BXW9 1451 aa8.18□□□□□ -1.1
PDE4D-214ENST00000506024 G3V3G9 751 aa8.17□□□□□ -1.1
PDE4D-214ENST00000506024 NKX1-1Q15270 411 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-214ENST00000506024 BBXQ8WY36 941 aaPredicted RBP8.17□□□□□ -1.1
PDE4D-214ENST00000506024 POTEB2H3BUK9 544 aa8.16□□□□□ -1.1
PDE4D-214ENST00000506024 ARHGEF11O15085 1522 aa8.16□□□□□ -1.1
PDE4D-214ENST00000506024 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.16□□□□□ -1.1
PDE4D-214ENST00000506024 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
PDE4D-214ENST00000506024 L3MBTL3Q96JM7 780 aaPredicted RBP8.15□□□□□ -1.1
PDE4D-214ENST00000506024 MS4A4AQ96JQ5 239 aa8.15□□□□□ -1.1
PDE4D-214ENST00000506024 ILDR1Q86SU0 546 aaPredicted RBP8.14□□□□□ -1.11
PDE4D-214ENST00000506024 RYDENQ9NUL5 291 aaKnown RBP8.13□□□□□ -1.11
PDE4D-214ENST00000506024 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
PDE4D-214ENST00000506024 BOLA1Q9Y3E2 137 aa8.12□□□□□ -1.11
PDE4D-214ENST00000506024 MAMSTRQ6ZN01 415 aa8.11□□□□□ -1.11
PDE4D-214ENST00000506024 POTEJP0CG39 1038 aa8.1□□□□□ -1.11
PDE4D-214ENST00000506024 PAXIP1Q6ZW49 1069 aaPredicted RBP8.1□□□□□ -1.11
PDE4D-214ENST00000506024 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
PDE4D-214ENST00000506024 SCUBE2Q9NQ36 999 aa8.1□□□□□ -1.11
PDE4D-214ENST00000506024 CFTRP13569 1480 aa8.1□□□□□ -1.11
PDE4D-214ENST00000506024 GTPBP6O43824 516 aaPredicted RBP8.09□□□□□ -1.11
PDE4D-214ENST00000506024 PPP1R37O75864 691 aa8.09□□□□□ -1.11
PDE4D-214ENST00000506024 C3orf67Q6ZVT6 689 aa8.09□□□□□ -1.11
PDE4D-214ENST00000506024 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.11
PDE4D-214ENST00000506024 CYB5RLQ6IPT4 315 aa8.08□□□□□ -1.12
PDE4D-214ENST00000506024 ZNF608Q9ULD9 1512 aaPredicted RBP8.08□□□□□ -1.12
PDE4D-214ENST00000506024 WIZO95785 1651 aa8.08□□□□□ -1.12
PDE4D-214ENST00000506024 MICALL2Q8IY33 904 aa8.07□□□□□ -1.12
PDE4D-214ENST00000506024 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.07□□□□□ -1.12
PDE4D-214ENST00000506024 ARAP1Q96P48 1450 aa8.06□□□□□ -1.12
PDE4D-214ENST00000506024 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
PDE4D-214ENST00000506024 OTUD5Q96G74 571 aa8.04□□□□□ -1.12
PDE4D-214ENST00000506024 SLAIN1Q8ND83 568 aa8.03□□□□□ -1.12
PDE4D-214ENST00000506024 RSF1Q96T23 1441 aaPredicted RBP8.03□□□□□ -1.12
PDE4D-214ENST00000506024 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
PDE4D-214ENST00000506024 TMEM121BQ9BXQ6 578 aaPredicted RBP8.02□□□□□ -1.13
PDE4D-214ENST00000506024 TOP2AP11388 1531 aaKnown RBP7.99□□□□□ -1.13
PDE4D-214ENST00000506024 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
PDE4D-214ENST00000506024 CHD1O14646 1710 aa7.98□□□□□ -1.13
PDE4D-214ENST00000506024 PLCB2Q00722 1185 aa7.96□□□□□ -1.14
PDE4D-214ENST00000506024 TMC2Q8TDI7 906 aa7.96□□□□□ -1.14
PDE4D-214ENST00000506024 PRDM2Q13029 1718 aa7.95□□□□□ -1.14
PDE4D-214ENST00000506024 AQRO60306 1485 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDE4D-214ENST00000506024 TMEM92Q6UXU6 159 aa7.95□□□□□ -1.14
PDE4D-214ENST00000506024 ABCC8Q09428 1581 aa7.93□□□□□ -1.14
PDE4D-214ENST00000506024 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
PDE4D-214ENST00000506024 C2orf72A6NCS6 295 aa7.92□□□□□ -1.14
PDE4D-214ENST00000506024 CLASP1Q7Z460 1538 aa7.92□□□□□ -1.14
PDE4D-214ENST00000506024 TARBP1Q13395 1621 aaKnown RBP7.92□□□□□ -1.14
PDE4D-214ENST00000506024 PDE4AP27815 886 aa7.91□□□□□ -1.14
PDE4D-214ENST00000506024 CADPS2Q86UW7 1296 aa7.91□□□□□ -1.14
PDE4D-214ENST00000506024 TSHZ2Q9NRE2 1034 aa7.91□□□□□ -1.14
PDE4D-214ENST00000506024 HAP1P54257 671 aaPredicted RBP7.9□□□□□ -1.14
PDE4D-214ENST00000506024 POLA1P09884 1462 aaPredicted RBP7.89□□□□□ -1.15
PDE4D-214ENST00000506024 SNAPC4Q5SXM2 1469 aa7.89□□□□□ -1.15
PDE4D-214ENST00000506024 SNPHO15079 494 aa7.89□□□□□ -1.15
PDE4D-214ENST00000506024 LARP6Q9BRS8 491 aaKnown RBP7.89□□□□□ -1.15
PDE4D-214ENST00000506024 SYNJ1O43426 1573 aa7.88□□□□□ -1.15
PDE4D-214ENST00000506024 CCDC88BA6NC98 1476 aa7.88□□□□□ -1.15
PDE4D-214ENST00000506024 GPHNQ9NQX3 736 aaPredicted RBP7.88□□□□□ -1.15
PDE4D-214ENST00000506024 NCKAP5LQ9HCH0 1330 aa7.87□□□□□ -1.15
PDE4D-214ENST00000506024 KIF3CO14782 793 aa7.87□□□□□ -1.15
PDE4D-214ENST00000506024 FAM163AQ96GL9 167 aaPredicted RBP7.87□□□□□ -1.15
PDE4D-214ENST00000506024 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
PDE4D-214ENST00000506024 TDRD9Q8NDG6 1382 aaKnown RBP7.86□□□□□ -1.15
PDE4D-214ENST00000506024 GAPVD1Q14C86 1478 aa7.86□□□□□ -1.15
PDE4D-214ENST00000506024 MAGI1Q96QZ7 1491 aaPredicted RBP7.86□□□□□ -1.15
PDE4D-214ENST00000506024 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
PDE4D-214ENST00000506024 DSG2Q14126 1118 aa7.85□□□□□ -1.15
PDE4D-214ENST00000506024 PLPP6Q8IY26 295 aa7.85□□□□□ -1.15
PDE4D-214ENST00000506024 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
PDE4D-214ENST00000506024 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
PDE4D-214ENST00000506024 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
PDE4D-214ENST00000506024 FOXK1P85037 733 aa7.84□□□□□ -1.15
PDE4D-214ENST00000506024 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
PDE4D-214ENST00000506024 PPP1R15BQ5SWA1 713 aa7.84□□□□□ -1.15
PDE4D-214ENST00000506024 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
PDE4D-214ENST00000506024 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
PDE4D-214ENST00000506024 RIMBP2O15034 1052 aa7.83□□□□□ -1.16
PDE4D-214ENST00000506024 SOGA1O94964 1423 aa7.83□□□□□ -1.16
PDE4D-214ENST00000506024 SYNJ2O15056 1496 aa7.82□□□□□ -1.16
PDE4D-214ENST00000506024 GRIN2BQ13224 1484 aa7.81□□□□□ -1.16
PDE4D-214ENST00000506024 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-214ENST00000506024 FGD5Q6ZNL6 1462 aa7.81□□□□□ -1.16
PDE4D-214ENST00000506024 MFSD10Q14728 455 aa7.8□□□□□ -1.16
PDE4D-214ENST00000506024 ST18O60284 1047 aa7.79□□□□□ -1.16
PDE4D-214ENST00000506024 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDE4D-214ENST00000506024 ERCC6L2Q5T890 1561 aa7.76□□□□□ -1.17
PDE4D-214ENST00000506024 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms