RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CSRNP3Q8WYN3 585 aa26.86■■□□□ 1.89
PDLIM7-213ENST00000505074 SOCS7O14512 581 aa26.85■■□□□ 1.89
PDLIM7-213ENST00000505074 ILDR2Q71H61 639 aa26.85■■□□□ 1.89
PDLIM7-213ENST00000505074 ARHGEF12Q9NZN5 1544 aa26.82■■□□□ 1.88
PDLIM7-213ENST00000505074 DMRT2Q9Y5R5 561 aa26.82■■□□□ 1.88
PDLIM7-213ENST00000505074 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
PDLIM7-213ENST00000505074 STRCQ7RTU9 1775 aa26.79■■□□□ 1.88
PDLIM7-213ENST00000505074 ATP10AO60312 1499 aa26.79■■□□□ 1.88
PDLIM7-213ENST00000505074 EEA1Q15075 1411 aa26.78■■□□□ 1.88
PDLIM7-213ENST00000505074 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
PDLIM7-213ENST00000505074 PLCH2O75038 1416 aa26.75■■□□□ 1.87
PDLIM7-213ENST00000505074 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
PDLIM7-213ENST00000505074 CEBPAP49715 358 aaPredicted RBP26.74■■□□□ 1.87
PDLIM7-213ENST00000505074 UHRF1BP1Q6BDS2 1440 aa26.71■■□□□ 1.87
PDLIM7-213ENST00000505074 MYO5CQ9NQX4 1742 aa26.7■■□□□ 1.87
PDLIM7-213ENST00000505074 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
PDLIM7-213ENST00000505074 SPATA31D1Q6ZQQ2 1576 aa26.7■■□□□ 1.86
PDLIM7-213ENST00000505074 EFCAB2Q5VUJ9 269 aa26.67■■□□□ 1.86
PDLIM7-213ENST00000505074 PTPRTO14522 1441 aa26.63■■□□□ 1.85
PDLIM7-213ENST00000505074 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
PDLIM7-213ENST00000505074 MYT1LQ9UL68 1186 aa26.59■■□□□ 1.85
PDLIM7-213ENST00000505074 C3P01024 1663 aa26.59■■□□□ 1.85
PDLIM7-213ENST00000505074 KDM5CP41229 1560 aa26.58■■□□□ 1.85
PDLIM7-213ENST00000505074 AFAP1Q8N556 730 aa26.55■■□□□ 1.84
PDLIM7-213ENST00000505074 ATP1B4Q9UN42 357 aaPredicted RBP26.55■■□□□ 1.84
PDLIM7-213ENST00000505074 CDK11AQ9UQ88 783 aaPredicted RBP26.55■■□□□ 1.84
PDLIM7-213ENST00000505074 REREQ9P2R6 1566 aa26.54■■□□□ 1.84
PDLIM7-213ENST00000505074 DIP2CQ9Y2E4 1556 aa26.54■■□□□ 1.84
PDLIM7-213ENST00000505074 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
PDLIM7-213ENST00000505074 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
PDLIM7-213ENST00000505074 ARHGAP5Q13017 1502 aa26.54■■□□□ 1.84
PDLIM7-213ENST00000505074 ESF1Q9H501 851 aaKnown RBP26.53■■□□□ 1.84
PDLIM7-213ENST00000505074 KIF14Q15058 1648 aa26.53■■□□□ 1.84
PDLIM7-213ENST00000505074 LTBP4Q8N2S1 1624 aa26.53■■□□□ 1.84
PDLIM7-213ENST00000505074 ABCA6Q8N139 1617 aa26.49■■□□□ 1.83
PDLIM7-213ENST00000505074 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
PDLIM7-213ENST00000505074 TRAPPC8Q9Y2L5 1435 aa26.48■■□□□ 1.83
PDLIM7-213ENST00000505074 MLH3Q9UHC1 1453 aa26.46■■□□□ 1.83
PDLIM7-213ENST00000505074 AGLP35573 1532 aa26.45■■□□□ 1.83
PDLIM7-213ENST00000505074 TROQ12816 1431 aaPredicted RBP26.45■■□□□ 1.82
PDLIM7-213ENST00000505074 UBTFP17480 764 aaKnown RBP26.44■■□□□ 1.82
PDLIM7-213ENST00000505074 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
PDLIM7-213ENST00000505074 CLIP1P30622 1438 aa26.44■■□□□ 1.82
PDLIM7-213ENST00000505074 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
PDLIM7-213ENST00000505074 CDC42BPBQ9Y5S2 1711 aa26.44■■□□□ 1.82
PDLIM7-213ENST00000505074 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
PDLIM7-213ENST00000505074 CAMSAP1Q5T5Y3 1602 aa26.37■■□□□ 1.81
PDLIM7-213ENST00000505074 ITSN2Q9NZM3 1697 aa26.36■■□□□ 1.81
PDLIM7-213ENST00000505074 LRRIQ1Q96JM4 1722 aa26.35■■□□□ 1.81
PDLIM7-213ENST00000505074 PREX2Q70Z35 1606 aa26.35■■□□□ 1.81
PDLIM7-213ENST00000505074 MROH2AA6NES4 1674 aa26.34■■□□□ 1.81
PDLIM7-213ENST00000505074 ABCC1P33527 1531 aa26.34■■□□□ 1.81
PDLIM7-213ENST00000505074 KIDINS220Q9ULH0 1771 aa26.34■■□□□ 1.81
PDLIM7-213ENST00000505074 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
PDLIM7-213ENST00000505074 NPATQ14207 1427 aa26.31■■□□□ 1.8
PDLIM7-213ENST00000505074 UBAP1LF5GYI3 381 aa26.31■■□□□ 1.8
PDLIM7-213ENST00000505074 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
PDLIM7-213ENST00000505074 ZNF335Q9H4Z2 1342 aaPredicted RBP26.27■■□□□ 1.8
PDLIM7-213ENST00000505074 NCKAP5LQ9HCH0 1330 aa26.27■■□□□ 1.8
PDLIM7-213ENST00000505074 ZMYM3Q14202 1370 aa26.25■■□□□ 1.79
PDLIM7-213ENST00000505074 CDC42BPAQ5VT25 1732 aa26.23■■□□□ 1.79
PDLIM7-213ENST00000505074 ZNF142P52746 1687 aaPredicted RBP26.22■■□□□ 1.79
PDLIM7-213ENST00000505074 PKD2Q13563 968 aa26.21■■□□□ 1.79
PDLIM7-213ENST00000505074 PLA2R1Q13018 1463 aa26.21■■□□□ 1.79
PDLIM7-213ENST00000505074 MYO3AQ8NEV4 1616 aa26.21■■□□□ 1.79
PDLIM7-213ENST00000505074 CLTCQ00610 1675 aaKnown RBP26.2■■□□□ 1.78
PDLIM7-213ENST00000505074 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
PDLIM7-213ENST00000505074 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
PDLIM7-213ENST00000505074 CEP170BQ9Y4F5 1589 aaPredicted RBP26.16■■□□□ 1.78
PDLIM7-213ENST00000505074 TCOF1Q13428 1488 aaKnown RBP26.15■■□□□ 1.78
PDLIM7-213ENST00000505074 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.78
PDLIM7-213ENST00000505074 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
PDLIM7-213ENST00000505074 PPP6R1Q9UPN7 881 aa26.12■■□□□ 1.77
PDLIM7-213ENST00000505074 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
PDLIM7-213ENST00000505074 PTPRKQ15262 1439 aa26.1■■□□□ 1.77
PDLIM7-213ENST00000505074 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
PDLIM7-213ENST00000505074 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
PDLIM7-213ENST00000505074 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
PDLIM7-213ENST00000505074 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
PDLIM7-213ENST00000505074 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
PDLIM7-213ENST00000505074 A2MP01023 1474 aa26.07■■□□□ 1.76
PDLIM7-213ENST00000505074 HNRNPMP52272 730 aaKnown RBP eCLIP26.06■■□□□ 1.761e-7■■■□□ 16.6
PDLIM7-213ENST00000505074 GGT6Q6P531 493 aa26.06■■□□□ 1.76
PDLIM7-213ENST00000505074 HSPA1LP34931 641 aa26.05■■□□□ 1.76
PDLIM7-213ENST00000505074 INO80Q9ULG1 1556 aaPredicted RBP26.04■■□□□ 1.76
PDLIM7-213ENST00000505074 TOM1O60784 492 aa26.03■■□□□ 1.76
PDLIM7-213ENST00000505074 PIP4K2BP78356 416 aa26.03■■□□□ 1.76
PDLIM7-213ENST00000505074 GPATCH8Q9UKJ3 1502 aaKnown RBP26.02■■□□□ 1.76
PDLIM7-213ENST00000505074 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
PDLIM7-213ENST00000505074 A2ML1A8K2U0 1454 aa26.01■■□□□ 1.75
PDLIM7-213ENST00000505074 DNMT1P26358 1616 aaKnown RBP26.01■■□□□ 1.75
PDLIM7-213ENST00000505074 PLEKHH2Q8IVE3 1493 aa26.01■■□□□ 1.75
PDLIM7-213ENST00000505074 ADGBQ8N7X0 1667 aa26■■□□□ 1.75
PDLIM7-213ENST00000505074 CPS1P31327 1500 aa26■■□□□ 1.75
PDLIM7-213ENST00000505074 KIAA1107Q9UPP5 1409 aa26■■□□□ 1.75
PDLIM7-213ENST00000505074 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
PDLIM7-213ENST00000505074 CFDP1Q9UEE9 299 aaPredicted RBP25.95■■□□□ 1.74
PDLIM7-213ENST00000505074 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
PDLIM7-213ENST00000505074 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
PDLIM7-213ENST00000505074 NEURL4Q96JN8 1562 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms