RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 KIF27Q86VH2 1401 aa10.67□□□□□ -0.7
ATP2C1-208ENST00000504948 EFCAB5A4FU69 1503 aa10.66□□□□□ -0.7
ATP2C1-208ENST00000504948 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.7
ATP2C1-208ENST00000504948 ABCC10Q5T3U5 1492 aa10.65□□□□□ -0.7
ATP2C1-208ENST00000504948 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
ATP2C1-208ENST00000504948 RAPGEF2Q9Y4G8 1499 aa10.64□□□□□ -0.71
ATP2C1-208ENST00000504948 RICTORQ6R327 1708 aa10.63□□□□□ -0.71
ATP2C1-208ENST00000504948 BCORL1Q5H9F3 1711 aa10.63□□□□□ -0.71
ATP2C1-208ENST00000504948 EEA1Q15075 1411 aa10.62□□□□□ -0.71
ATP2C1-208ENST00000504948 ARAP3Q8WWN8 1544 aa10.61□□□□□ -0.71
ATP2C1-208ENST00000504948 RAPGEF6Q8TEU7 1601 aa10.61□□□□□ -0.71
ATP2C1-208ENST00000504948 MSH5O43196 834 aa10.61□□□□□ -0.71
ATP2C1-208ENST00000504948 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
ATP2C1-208ENST00000504948 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
ATP2C1-208ENST00000504948 ZBTB7CA1YPR0 619 aa10.6□□□□□ -0.71
ATP2C1-208ENST00000504948 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
ATP2C1-208ENST00000504948 SIGLEC1Q9BZZ2 1709 aa10.58□□□□□ -0.72
ATP2C1-208ENST00000504948 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
ATP2C1-208ENST00000504948 GLIPR1L2Q4G1C9 344 aa10.57□□□□□ -0.72
ATP2C1-208ENST00000504948 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
ATP2C1-208ENST00000504948 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
ATP2C1-208ENST00000504948 REREQ9P2R6 1566 aa10.56□□□□□ -0.72
ATP2C1-208ENST00000504948 CFAP74Q9C0B2 1584 aa10.55□□□□□ -0.72
ATP2C1-208ENST00000504948 MAGI3Q5TCQ9 1506 aa10.55□□□□□ -0.72
ATP2C1-208ENST00000504948 SPRYD3Q8NCJ5 442 aa10.54□□□□□ -0.72
ATP2C1-208ENST00000504948 MYT1LQ9UL68 1186 aa10.53□□□□□ -0.72
ATP2C1-208ENST00000504948 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
ATP2C1-208ENST00000504948 CHIC2Q9UKJ5 165 aa10.52□□□□□ -0.73
ATP2C1-208ENST00000504948 BRPF3Q9ULD4 1205 aa10.52□□□□□ -0.73
ATP2C1-208ENST00000504948 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
ATP2C1-208ENST00000504948 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
ATP2C1-208ENST00000504948 RGS3P49796 1198 aa10.51□□□□□ -0.73
ATP2C1-208ENST00000504948 TPRNQ4KMQ1 711 aa10.51□□□□□ -0.73
ATP2C1-208ENST00000504948 ADAMTSL3P82987 1691 aa10.5□□□□□ -0.73
ATP2C1-208ENST00000504948 CDC42BPBQ9Y5S2 1711 aa10.5□□□□□ -0.73
ATP2C1-208ENST00000504948 GZF1Q9H116 711 aaPredicted RBP10.5□□□□□ -0.73
ATP2C1-208ENST00000504948 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
ATP2C1-208ENST00000504948 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
ATP2C1-208ENST00000504948 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
ATP2C1-208ENST00000504948 PREX2Q70Z35 1606 aa10.48□□□□□ -0.73
ATP2C1-208ENST00000504948 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
ATP2C1-208ENST00000504948 ITSN2Q9NZM3 1697 aa10.48□□□□□ -0.73
ATP2C1-208ENST00000504948 TONSLQ96HA7 1378 aa10.47□□□□□ -0.73
ATP2C1-208ENST00000504948 MYO5CQ9NQX4 1742 aa10.47□□□□□ -0.73
ATP2C1-208ENST00000504948 KDM5CP41229 1560 aa10.46□□□□□ -0.73
ATP2C1-208ENST00000504948 CANXP27824 592 aaKnown RBP10.46□□□□□ -0.73
ATP2C1-208ENST00000504948 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
ATP2C1-208ENST00000504948 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
ATP2C1-208ENST00000504948 PLB1Q6P1J6 1458 aa10.44□□□□□ -0.74
ATP2C1-208ENST00000504948 NUP153P49790 1475 aaKnown RBP10.44□□□□□ -0.74
ATP2C1-208ENST00000504948 CEP162Q5TB80 1403 aa10.43□□□□□ -0.74
ATP2C1-208ENST00000504948 SLKQ9H2G2 1235 aaPredicted RBP10.43□□□□□ -0.74
ATP2C1-208ENST00000504948 UACAQ9BZF9 1416 aa10.43□□□□□ -0.74
ATP2C1-208ENST00000504948 HECW1Q76N89 1606 aa10.43□□□□□ -0.74
ATP2C1-208ENST00000504948 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
ATP2C1-208ENST00000504948 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
ATP2C1-208ENST00000504948 MROH2AA6NES4 1674 aa10.41□□□□□ -0.74
ATP2C1-208ENST00000504948 KDM6BO15054 1643 aa10.41□□□□□ -0.74
ATP2C1-208ENST00000504948 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
ATP2C1-208ENST00000504948 ARHGEF40Q8TER5 1519 aa10.4□□□□□ -0.74
ATP2C1-208ENST00000504948 HSP90AA1P07900 732 aaKnown RBP10.4□□□□□ -0.74
ATP2C1-208ENST00000504948 SENP3Q9H4L4 574 aaPredicted RBP10.39□□□□□ -0.75
ATP2C1-208ENST00000504948 CROCC2H7BZ55 1655 aa10.39□□□□□ -0.75
ATP2C1-208ENST00000504948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.754e-8■□□□□ 8.6
ATP2C1-208ENST00000504948 ERICH6BQ5W0A0 696 aa10.39□□□□□ -0.75
ATP2C1-208ENST00000504948 PKNOX2Q96KN3 472 aa10.38□□□□□ -0.75
ATP2C1-208ENST00000504948 IPO9Q96P70 1041 aaKnown RBP10.38□□□□□ -0.75
ATP2C1-208ENST00000504948 KDM2AQ9Y2K7 1162 aa10.38□□□□□ -0.75
ATP2C1-208ENST00000504948 PLXNC1O60486 1568 aa10.38□□□□□ -0.75
ATP2C1-208ENST00000504948 SKAP1Q86WV1 359 aa10.38□□□□□ -0.75
ATP2C1-208ENST00000504948 TSPOAP1O95153 1857 aa10.37□□□□□ -0.75
ATP2C1-208ENST00000504948 PCF11O94913 1555 aaKnown RBP10.36□□□□□ -0.75
ATP2C1-208ENST00000504948 INO80Q9ULG1 1556 aaPredicted RBP10.36□□□□□ -0.75
ATP2C1-208ENST00000504948 MAP3K1Q13233 1512 aa10.36□□□□□ -0.75
ATP2C1-208ENST00000504948 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
ATP2C1-208ENST00000504948 ATP10BO94823 1461 aa10.36□□□□□ -0.75
ATP2C1-208ENST00000504948 ARHGAP35Q9NRY4 1499 aa10.36□□□□□ -0.75
ATP2C1-208ENST00000504948 RRP7BPQ9NSQ0 103 aa10.35□□□□□ -0.75
ATP2C1-208ENST00000504948 ASXL2Q76L83 1435 aa10.35□□□□□ -0.75
ATP2C1-208ENST00000504948 KANK4Q5T7N3 995 aaPredicted RBP10.34□□□□□ -0.75
ATP2C1-208ENST00000504948 NEO1Q92859 1461 aa10.34□□□□□ -0.75
ATP2C1-208ENST00000504948 PPM1GO15355 546 aaPredicted RBP10.33□□□□□ -0.75
ATP2C1-208ENST00000504948 KIF14Q15058 1648 aa10.33□□□□□ -0.76
ATP2C1-208ENST00000504948 ZNF142P52746 1687 aaPredicted RBP10.33□□□□□ -0.76
ATP2C1-208ENST00000504948 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
ATP2C1-208ENST00000504948 TRIM44Q96DX7 344 aaPredicted RBP10.33□□□□□ -0.76
ATP2C1-208ENST00000504948 FER1L4A9Z1Z3 1794 aa10.32□□□□□ -0.76
ATP2C1-208ENST00000504948 NCLP19338 710 aaKnown RBP10.32□□□□□ -0.76
ATP2C1-208ENST00000504948 COL17A1Q9UMD9 1497 aaPredicted RBP10.32□□□□□ -0.76
ATP2C1-208ENST00000504948 PLIN1O60240 522 aa10.32□□□□□ -0.76
ATP2C1-208ENST00000504948 FOXD1Q16676 465 aa10.32□□□□□ -0.76
ATP2C1-208ENST00000504948 MAST1Q9Y2H9 1570 aa10.31□□□□□ -0.76
ATP2C1-208ENST00000504948 FAM135AQ9P2D6 1515 aa10.31□□□□□ -0.76
ATP2C1-208ENST00000504948 JPH4Q96JJ6 628 aa10.31□□□□□ -0.76
ATP2C1-208ENST00000504948 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
ATP2C1-208ENST00000504948 CHMP7Q8WUX9 453 aaPredicted RBP10.31□□□□□ -0.76
ATP2C1-208ENST00000504948 KIDINS220Q9ULH0 1771 aa10.3□□□□□ -0.76
ATP2C1-208ENST00000504948 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
ATP2C1-208ENST00000504948 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
ATP2C1-208ENST00000504948 ZNF777Q9ULD5 760 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms