RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-209ENST00000504872 ATP1B4Q9UN42 357 aaPredicted RBP17.12■□□□□ 0.33
APBB3-209ENST00000504872 PTPRTO14522 1441 aa17.11■□□□□ 0.33
APBB3-209ENST00000504872 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
APBB3-209ENST00000504872 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
APBB3-209ENST00000504872 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
APBB3-209ENST00000504872 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
APBB3-209ENST00000504872 HSPA1LP34931 641 aa17.09■□□□□ 0.33
APBB3-209ENST00000504872 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
APBB3-209ENST00000504872 PREX1Q8TCU6 1659 aa17.08■□□□□ 0.32
APBB3-209ENST00000504872 ARHGEF40Q8TER5 1519 aa17.07■□□□□ 0.32
APBB3-209ENST00000504872 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
APBB3-209ENST00000504872 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
APBB3-209ENST00000504872 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
APBB3-209ENST00000504872 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
APBB3-209ENST00000504872 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
APBB3-209ENST00000504872 TROQ12816 1431 aaPredicted RBP17.03■□□□□ 0.32
APBB3-209ENST00000504872 MLECQ14165 292 aa17.02■□□□□ 0.32
APBB3-209ENST00000504872 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
APBB3-209ENST00000504872 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
APBB3-209ENST00000504872 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
APBB3-209ENST00000504872 PHLDB1Q86UU1 1377 aa16.99■□□□□ 0.31
APBB3-209ENST00000504872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
APBB3-209ENST00000504872 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
APBB3-209ENST00000504872 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
APBB3-209ENST00000504872 MAP3K1Q13233 1512 aa16.95■□□□□ 0.3
APBB3-209ENST00000504872 PLCH2O75038 1416 aa16.95■□□□□ 0.3
APBB3-209ENST00000504872 FANCAO15360 1455 aa16.94■□□□□ 0.3
APBB3-209ENST00000504872 NEO1Q92859 1461 aa16.94■□□□□ 0.3
APBB3-209ENST00000504872 UHRF1BP1Q6BDS2 1440 aa16.94■□□□□ 0.3
APBB3-209ENST00000504872 POGZQ7Z3K3 1410 aa16.94■□□□□ 0.3
APBB3-209ENST00000504872 ARHGEF12Q9NZN5 1544 aa16.91■□□□□ 0.3
APBB3-209ENST00000504872 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
APBB3-209ENST00000504872 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
APBB3-209ENST00000504872 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
APBB3-209ENST00000504872 KIF14Q15058 1648 aa16.89■□□□□ 0.29
APBB3-209ENST00000504872 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
APBB3-209ENST00000504872 AKNAQ7Z591 1439 aa16.88■□□□□ 0.29
APBB3-209ENST00000504872 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
APBB3-209ENST00000504872 TIAM1Q13009 1591 aa16.88■□□□□ 0.29
APBB3-209ENST00000504872 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
APBB3-209ENST00000504872 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
APBB3-209ENST00000504872 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
APBB3-209ENST00000504872 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
APBB3-209ENST00000504872 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
APBB3-209ENST00000504872 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
APBB3-209ENST00000504872 EHBP1L1Q8N3D4 1523 aa16.83■□□□□ 0.28
APBB3-209ENST00000504872 ZFYVE16Q7Z3T8 1539 aa16.82■□□□□ 0.28
APBB3-209ENST00000504872 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
APBB3-209ENST00000504872 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
APBB3-209ENST00000504872 APLP2Q06481 763 aa16.8■□□□□ 0.28
APBB3-209ENST00000504872 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
APBB3-209ENST00000504872 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
APBB3-209ENST00000504872 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
APBB3-209ENST00000504872 NCKAP5LQ9HCH0 1330 aa16.78■□□□□ 0.28
APBB3-209ENST00000504872 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
APBB3-209ENST00000504872 SCAPERQ9BY12 1400 aa16.78■□□□□ 0.28
APBB3-209ENST00000504872 ALKQ9UM73 1620 aa16.78■□□□□ 0.28
APBB3-209ENST00000504872 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
APBB3-209ENST00000504872 CFDP1Q9UEE9 299 aaPredicted RBP16.77■□□□□ 0.28
APBB3-209ENST00000504872 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
APBB3-209ENST00000504872 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
APBB3-209ENST00000504872 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
APBB3-209ENST00000504872 ARHGAP5Q13017 1502 aa16.74■□□□□ 0.27
APBB3-209ENST00000504872 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
APBB3-209ENST00000504872 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
APBB3-209ENST00000504872 KIAA1107Q9UPP5 1409 aa16.73■□□□□ 0.27
APBB3-209ENST00000504872 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
APBB3-209ENST00000504872 ZNF644Q9H582 1327 aaPredicted RBP16.72■□□□□ 0.27
APBB3-209ENST00000504872 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
APBB3-209ENST00000504872 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
APBB3-209ENST00000504872 C3P01024 1663 aa16.71■□□□□ 0.27
APBB3-209ENST00000504872 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
APBB3-209ENST00000504872 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
APBB3-209ENST00000504872 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
APBB3-209ENST00000504872 MAGI2Q86UL8 1455 aa16.69■□□□□ 0.26
APBB3-209ENST00000504872 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
APBB3-209ENST00000504872 MIA2Q96PC5 1412 aa16.68■□□□□ 0.26
APBB3-209ENST00000504872 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
APBB3-209ENST00000504872 MYOM3Q5VTT5 1437 aa16.67■□□□□ 0.26
APBB3-209ENST00000504872 ATP10AO60312 1499 aa16.67■□□□□ 0.26
APBB3-209ENST00000504872 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
APBB3-209ENST00000504872 ABCC1P33527 1531 aa16.66■□□□□ 0.26
APBB3-209ENST00000504872 TOM1O60784 492 aa16.66■□□□□ 0.26
APBB3-209ENST00000504872 RSPH4AQ5TD94 716 aa16.66■□□□□ 0.26
APBB3-209ENST00000504872 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
APBB3-209ENST00000504872 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
APBB3-209ENST00000504872 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
APBB3-209ENST00000504872 KDM5CP41229 1560 aa16.64■□□□□ 0.25
APBB3-209ENST00000504872 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
APBB3-209ENST00000504872 UPF1Q92900 1129 aaKnown RBP eCLIP16.6■□□□□ 0.25
APBB3-209ENST00000504872 SYCP2Q9BX26 1530 aa16.6■□□□□ 0.25
APBB3-209ENST00000504872 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
APBB3-209ENST00000504872 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
APBB3-209ENST00000504872 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
APBB3-209ENST00000504872 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
APBB3-209ENST00000504872 RTEL1-TNFRSF6BF6WH68 1400 aa16.57■□□□□ 0.24
APBB3-209ENST00000504872 SPAG9O60271 1321 aaKnown RBP16.57■□□□□ 0.24
APBB3-209ENST00000504872 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
APBB3-209ENST00000504872 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
APBB3-209ENST00000504872 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 531.8 ms