RNA–Protein interactions for RNA: ENST00000504458.1

SERF1A-204, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4 BASIC

Gene SERF1A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-204ENST00000504458 KIF21AQ7Z4S6 1674 aa9.81□□□□□ -0.84
SERF1A-204ENST00000504458 SOX12O15370 315 aa9.81□□□□□ -0.84
SERF1A-204ENST00000504458 EFCAB3Q8N7B9 438 aa9.81□□□□□ -0.84
SERF1A-204ENST00000504458 TRIM26Q12899 539 aaPredicted RBP9.8□□□□□ -0.84
SERF1A-204ENST00000504458 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
SERF1A-204ENST00000504458 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
SERF1A-204ENST00000504458 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
SERF1A-204ENST00000504458 RTN4Q9NQC3 1192 aaKnown RBP9.79□□□□□ -0.84
SERF1A-204ENST00000504458 WIZO95785 1651 aa9.79□□□□□ -0.84
SERF1A-204ENST00000504458 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
SERF1A-204ENST00000504458 CEP164Q9UPV0 1460 aa9.77□□□□□ -0.85
SERF1A-204ENST00000504458 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
SERF1A-204ENST00000504458 PDCD7Q8N8D1 485 aaKnown RBP9.76□□□□□ -0.85
SERF1A-204ENST00000504458 TOP2AP11388 1531 aaKnown RBP9.76□□□□□ -0.85
SERF1A-204ENST00000504458 L3MBTL3Q96JM7 780 aaPredicted RBP9.75□□□□□ -0.85
SERF1A-204ENST00000504458 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
SERF1A-204ENST00000504458 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
SERF1A-204ENST00000504458 WDR62O43379 1518 aa9.74□□□□□ -0.85
SERF1A-204ENST00000504458 NLRP6P59044 892 aa9.73□□□□□ -0.85
SERF1A-204ENST00000504458 POTEJP0CG39 1038 aa9.71□□□□□ -0.86
SERF1A-204ENST00000504458 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.86
SERF1A-204ENST00000504458 G3V3G9 751 aa9.7□□□□□ -0.86
SERF1A-204ENST00000504458 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
SERF1A-204ENST00000504458 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
SERF1A-204ENST00000504458 PHF8Q9UPP1 1060 aa9.7□□□□□ -0.86
SERF1A-204ENST00000504458 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
SERF1A-204ENST00000504458 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
SERF1A-204ENST00000504458 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
SERF1A-204ENST00000504458 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
SERF1A-204ENST00000504458 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
SERF1A-204ENST00000504458 C3orf67Q6ZVT6 689 aa9.65□□□□□ -0.86
SERF1A-204ENST00000504458 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
SERF1A-204ENST00000504458 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.65□□□□□ -0.86
SERF1A-204ENST00000504458 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
SERF1A-204ENST00000504458 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
SERF1A-204ENST00000504458 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
SERF1A-204ENST00000504458 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
SERF1A-204ENST00000504458 EEA1Q15075 1411 aa9.64□□□□□ -0.87
SERF1A-204ENST00000504458 ARHGEF11O15085 1522 aa9.63□□□□□ -0.87
SERF1A-204ENST00000504458 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
SERF1A-204ENST00000504458 CFTRP13569 1480 aa9.61□□□□□ -0.87
SERF1A-204ENST00000504458 TMEM121BQ9BXQ6 578 aaPredicted RBP9.61□□□□□ -0.87
SERF1A-204ENST00000504458 ZNF608Q9ULD9 1512 aaPredicted RBP9.6□□□□□ -0.87
SERF1A-204ENST00000504458 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
SERF1A-204ENST00000504458 FAM9AQ8IZU1 332 aaPredicted RBP9.59□□□□□ -0.87
SERF1A-204ENST00000504458 SLAIN1Q8ND83 568 aa9.59□□□□□ -0.87
SERF1A-204ENST00000504458 NKX1-1Q15270 411 aaPredicted RBP9.58□□□□□ -0.88
SERF1A-204ENST00000504458 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
SERF1A-204ENST00000504458 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
SERF1A-204ENST00000504458 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
SERF1A-204ENST00000504458 BBXQ8WY36 941 aaPredicted RBP9.56□□□□□ -0.88
SERF1A-204ENST00000504458 AQRO60306 1485 aaKnown RBP eCLIP9.54□□□□□ -0.88
SERF1A-204ENST00000504458 TNIKQ9UKE5 1360 aa9.53□□□□□ -0.88
SERF1A-204ENST00000504458 SNPHO15079 494 aa9.51□□□□□ -0.89
SERF1A-204ENST00000504458 GTPBP6O43824 516 aaPredicted RBP9.51□□□□□ -0.89
SERF1A-204ENST00000504458 PPARGC1BQ86YN6 1023 aaKnown RBP9.51□□□□□ -0.89
SERF1A-204ENST00000504458 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.51□□□□□ -0.89
SERF1A-204ENST00000504458 ARAP1Q96P48 1450 aa9.51□□□□□ -0.89
SERF1A-204ENST00000504458 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
SERF1A-204ENST00000504458 PPP1R37O75864 691 aa9.5□□□□□ -0.89
SERF1A-204ENST00000504458 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
SERF1A-204ENST00000504458 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
SERF1A-204ENST00000504458 GOLGA3Q08378 1498 aa9.46□□□□□ -0.9
SERF1A-204ENST00000504458 CEP162Q5TB80 1403 aa9.45□□□□□ -0.9
SERF1A-204ENST00000504458 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
SERF1A-204ENST00000504458 SOGA1O94964 1423 aa9.44□□□□□ -0.9
SERF1A-204ENST00000504458 KIF21BO75037 1637 aa9.43□□□□□ -0.9
SERF1A-204ENST00000504458 EIF4G3O43432 1585 aaKnown RBP9.43□□□□□ -0.9
SERF1A-204ENST00000504458 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
SERF1A-204ENST00000504458 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
SERF1A-204ENST00000504458 RAD54L2Q9Y4B4 1467 aa9.41□□□□□ -0.9
SERF1A-204ENST00000504458 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
SERF1A-204ENST00000504458 KIF3CO14782 793 aa9.4□□□□□ -0.9
SERF1A-204ENST00000504458 DOK7Q18PE1 504 aa9.4□□□□□ -0.9
SERF1A-204ENST00000504458 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
SERF1A-204ENST00000504458 SYNJ1O43426 1573 aa9.38□□□□□ -0.91
SERF1A-204ENST00000504458 CHD1O14646 1710 aa9.38□□□□□ -0.91
SERF1A-204ENST00000504458 SNAPC4Q5SXM2 1469 aa9.38□□□□□ -0.91
SERF1A-204ENST00000504458 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
SERF1A-204ENST00000504458 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
SERF1A-204ENST00000504458 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
SERF1A-204ENST00000504458 POLA1P09884 1462 aaPredicted RBP9.36□□□□□ -0.91
SERF1A-204ENST00000504458 TOP2BQ02880 1626 aa9.36□□□□□ -0.91
SERF1A-204ENST00000504458 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
SERF1A-204ENST00000504458 CFAP44Q96MT7 982 aa9.36□□□□□ -0.91
SERF1A-204ENST00000504458 GPHNQ9NQX3 736 aaPredicted RBP9.36□□□□□ -0.91
SERF1A-204ENST00000504458 GAPVD1Q14C86 1478 aa9.35□□□□□ -0.91
SERF1A-204ENST00000504458 ST18O60284 1047 aa9.35□□□□□ -0.91
SERF1A-204ENST00000504458 UBTFP17480 764 aaKnown RBP9.35□□□□□ -0.91
SERF1A-204ENST00000504458 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
SERF1A-204ENST00000504458 BIVM-ERCC5R4GMW8 1640 aa9.34□□□□□ -0.91
SERF1A-204ENST00000504458 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
SERF1A-204ENST00000504458 PDE4AP27815 886 aa9.34□□□□□ -0.91
SERF1A-204ENST00000504458 FOXK1P85037 733 aa9.33□□□□□ -0.92
SERF1A-204ENST00000504458 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
SERF1A-204ENST00000504458 ZSWIM6Q9HCJ5 1215 aa9.33□□□□□ -0.92
SERF1A-204ENST00000504458 LCE2DQ5TA82 110 aaPredicted RBP9.32□□□□□ -0.92
SERF1A-204ENST00000504458 GRIN2BQ13224 1484 aa9.32□□□□□ -0.92
SERF1A-204ENST00000504458 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
SERF1A-204ENST00000504458 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms