RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
MATR3-233ENST00000504203 ZNF644Q9H582 1327 aaPredicted RBP18.61■□□□□ 0.57
MATR3-233ENST00000504203 ITSN2Q9NZM3 1697 aa18.59■□□□□ 0.57
MATR3-233ENST00000504203 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.57
MATR3-233ENST00000504203 ABCA8O94911 1581 aa18.58■□□□□ 0.56
MATR3-233ENST00000504203 TRIM52Q96A61 297 aa18.58■□□□□ 0.56
MATR3-233ENST00000504203 MPHOSPH9Q99550 1183 aa18.58■□□□□ 0.56
MATR3-233ENST00000504203 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
MATR3-233ENST00000504203 KIF14Q15058 1648 aa18.57■□□□□ 0.56
MATR3-233ENST00000504203 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
MATR3-233ENST00000504203 HIRIP3Q9BW71 556 aaPredicted RBP18.54■□□□□ 0.56
MATR3-233ENST00000504203 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
MATR3-233ENST00000504203 ATP10BO94823 1461 aa18.51■□□□□ 0.55
MATR3-233ENST00000504203 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
MATR3-233ENST00000504203 ADGRL2O95490 1459 aa18.5■□□□□ 0.55
MATR3-233ENST00000504203 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
MATR3-233ENST00000504203 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
MATR3-233ENST00000504203 KCNH8Q96L42 1107 aa18.49■□□□□ 0.55
MATR3-233ENST00000504203 CROCC2H7BZ55 1655 aa18.49■□□□□ 0.55
MATR3-233ENST00000504203 ABCC10Q5T3U5 1492 aa18.49■□□□□ 0.55
MATR3-233ENST00000504203 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
MATR3-233ENST00000504203 PLEKHD1A6NEE1 506 aa18.46■□□□□ 0.55
MATR3-233ENST00000504203 RPRD2Q5VT52 1461 aaKnown RBP18.46■□□□□ 0.55
MATR3-233ENST00000504203 FOXD1Q16676 465 aa18.46■□□□□ 0.55
MATR3-233ENST00000504203 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
MATR3-233ENST00000504203 PZPP20742 1482 aa18.44■□□□□ 0.54
MATR3-233ENST00000504203 L3MBTL2Q969R5 705 aa18.43■□□□□ 0.54
MATR3-233ENST00000504203 PTPRGP23470 1445 aa18.42■□□□□ 0.54
MATR3-233ENST00000504203 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
MATR3-233ENST00000504203 TEX14Q8IWB6 1497 aa18.42■□□□□ 0.54
MATR3-233ENST00000504203 CHD1O14646 1710 aa18.42■□□□□ 0.54
MATR3-233ENST00000504203 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
MATR3-233ENST00000504203 SLC4A1APQ9BWU0 796 aaKnown RBP18.41■□□□□ 0.54
MATR3-233ENST00000504203 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
MATR3-233ENST00000504203 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
MATR3-233ENST00000504203 ANP32CO43423 234 aa18.39■□□□□ 0.53
MATR3-233ENST00000504203 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
MATR3-233ENST00000504203 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
MATR3-233ENST00000504203 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
MATR3-233ENST00000504203 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
MATR3-233ENST00000504203 C9orf84Q5VXU9 1444 aa18.34■□□□□ 0.53
MATR3-233ENST00000504203 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
MATR3-233ENST00000504203 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
MATR3-233ENST00000504203 ARHGEF5Q12774 1597 aa18.33■□□□□ 0.53
MATR3-233ENST00000504203 NBPF8Q3BBV2 869 aa18.33■□□□□ 0.52
MATR3-233ENST00000504203 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
MATR3-233ENST00000504203 PREX2Q70Z35 1606 aa18.3■□□□□ 0.52
MATR3-233ENST00000504203 CDC42BPBQ9Y5S2 1711 aa18.3■□□□□ 0.52
MATR3-233ENST00000504203 KDM5DQ9BY66 1539 aa18.29■□□□□ 0.52
MATR3-233ENST00000504203 SAMD9LQ8IVG5 1584 aa18.28■□□□□ 0.52
MATR3-233ENST00000504203 SPATA31E1Q6ZUB1 1445 aa18.28■□□□□ 0.52
MATR3-233ENST00000504203 TSPY4P0CV99 314 aa18.27■□□□□ 0.52
MATR3-233ENST00000504203 TSPY10P0CW01 314 aa18.27■□□□□ 0.52
MATR3-233ENST00000504203 PKD2Q13563 968 aa18.27■□□□□ 0.52
MATR3-233ENST00000504203 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.52
MATR3-233ENST00000504203 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
MATR3-233ENST00000504203 HNRNPMP52272 730 aaKnown RBP eCLIP18.26■□□□□ 0.514e-9■■■■■ 28.9
MATR3-233ENST00000504203 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
MATR3-233ENST00000504203 CCDC141Q6ZP82 1450 aa18.25■□□□□ 0.51
MATR3-233ENST00000504203 KIF15Q9NS87 1388 aa18.24■□□□□ 0.51
MATR3-233ENST00000504203 NUP155O75694 1391 aa18.24■□□□□ 0.51
MATR3-233ENST00000504203 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
MATR3-233ENST00000504203 C11orf95C9JLR9 678 aaPredicted RBP18.23■□□□□ 0.51
MATR3-233ENST00000504203 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
MATR3-233ENST00000504203 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
MATR3-233ENST00000504203 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
MATR3-233ENST00000504203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.22■□□□□ 0.512e-7■□□□□ 10.6
MATR3-233ENST00000504203 POLR1AO95602 1720 aaPredicted RBP18.21■□□□□ 0.51
MATR3-233ENST00000504203 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
MATR3-233ENST00000504203 MAST1Q9Y2H9 1570 aa18.19■□□□□ 0.5
MATR3-233ENST00000504203 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
MATR3-233ENST00000504203 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
MATR3-233ENST00000504203 UHRF1BP1Q6BDS2 1440 aa18.17■□□□□ 0.5
MATR3-233ENST00000504203 MYO5CQ9NQX4 1742 aa18.15■□□□□ 0.5
MATR3-233ENST00000504203 ARHGEF12Q9NZN5 1544 aa18.15■□□□□ 0.5
MATR3-233ENST00000504203 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
MATR3-233ENST00000504203 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.5
MATR3-233ENST00000504203 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
MATR3-233ENST00000504203 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
MATR3-233ENST00000504203 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
MATR3-233ENST00000504203 PLXNC1O60486 1568 aa18.11■□□□□ 0.49
MATR3-233ENST00000504203 KDM5CP41229 1560 aa18.11■□□□□ 0.49
MATR3-233ENST00000504203 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
MATR3-233ENST00000504203 UNC13BO14795 1591 aa18.11■□□□□ 0.49
MATR3-233ENST00000504203 USP47Q96K76 1375 aa18.1■□□□□ 0.49
MATR3-233ENST00000504203 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
MATR3-233ENST00000504203 BCORL1Q5H9F3 1711 aa18.09■□□□□ 0.49
MATR3-233ENST00000504203 PLCH2O75038 1416 aa18.09■□□□□ 0.49
MATR3-233ENST00000504203 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
MATR3-233ENST00000504203 CCDC184Q52MB2 194 aa18.04■□□□□ 0.48
MATR3-233ENST00000504203 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
MATR3-233ENST00000504203 IQGAP3Q86VI3 1631 aa18.03■□□□□ 0.48
MATR3-233ENST00000504203 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
MATR3-233ENST00000504203 ABCC1P33527 1531 aa18.02■□□□□ 0.48
MATR3-233ENST00000504203 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
MATR3-233ENST00000504203 PLA2R1Q13018 1463 aa18.02■□□□□ 0.48
MATR3-233ENST00000504203 MAGI2Q86UL8 1455 aa18.02■□□□□ 0.48
MATR3-233ENST00000504203 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.48
MATR3-233ENST00000504203 FKBP8Q14318 412 aa18.02■□□□□ 0.47
MATR3-233ENST00000504203 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms