RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CSRNP3Q8WYN3 585 aa26.86■■□□□ 1.89
PDLIM7-210ENST00000503827 SOCS7O14512 581 aa26.85■■□□□ 1.89
PDLIM7-210ENST00000503827 ILDR2Q71H61 639 aa26.85■■□□□ 1.89
PDLIM7-210ENST00000503827 ARHGEF12Q9NZN5 1544 aa26.82■■□□□ 1.88
PDLIM7-210ENST00000503827 DMRT2Q9Y5R5 561 aa26.82■■□□□ 1.88
PDLIM7-210ENST00000503827 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
PDLIM7-210ENST00000503827 STRCQ7RTU9 1775 aa26.79■■□□□ 1.88
PDLIM7-210ENST00000503827 ATP10AO60312 1499 aa26.79■■□□□ 1.88
PDLIM7-210ENST00000503827 C9orf84Q5VXU9 1444 aa26.77■■□□□ 1.88
PDLIM7-210ENST00000503827 PLCH2O75038 1416 aa26.75■■□□□ 1.87
PDLIM7-210ENST00000503827 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
PDLIM7-210ENST00000503827 CEBPAP49715 358 aaPredicted RBP26.74■■□□□ 1.87
PDLIM7-210ENST00000503827 UHRF1BP1Q6BDS2 1440 aa26.71■■□□□ 1.87
PDLIM7-210ENST00000503827 MYO5CQ9NQX4 1742 aa26.7■■□□□ 1.87
PDLIM7-210ENST00000503827 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
PDLIM7-210ENST00000503827 SPATA31D1Q6ZQQ2 1576 aa26.7■■□□□ 1.86
PDLIM7-210ENST00000503827 EFCAB2Q5VUJ9 269 aa26.67■■□□□ 1.86
PDLIM7-210ENST00000503827 EEA1Q15075 1411 aa26.64■■□□□ 1.85
PDLIM7-210ENST00000503827 PTPRTO14522 1441 aa26.63■■□□□ 1.85
PDLIM7-210ENST00000503827 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
PDLIM7-210ENST00000503827 MYT1LQ9UL68 1186 aa26.59■■□□□ 1.85
PDLIM7-210ENST00000503827 C3P01024 1663 aa26.59■■□□□ 1.85
PDLIM7-210ENST00000503827 KDM5CP41229 1560 aa26.58■■□□□ 1.85
PDLIM7-210ENST00000503827 AFAP1Q8N556 730 aa26.55■■□□□ 1.84
PDLIM7-210ENST00000503827 ATP1B4Q9UN42 357 aaPredicted RBP26.55■■□□□ 1.84
PDLIM7-210ENST00000503827 CDK11AQ9UQ88 783 aaPredicted RBP26.55■■□□□ 1.84
PDLIM7-210ENST00000503827 REREQ9P2R6 1566 aa26.54■■□□□ 1.84
PDLIM7-210ENST00000503827 DIP2CQ9Y2E4 1556 aa26.54■■□□□ 1.84
PDLIM7-210ENST00000503827 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
PDLIM7-210ENST00000503827 ARHGAP5Q13017 1502 aa26.54■■□□□ 1.84
PDLIM7-210ENST00000503827 ESF1Q9H501 851 aaKnown RBP26.53■■□□□ 1.84
PDLIM7-210ENST00000503827 KIF14Q15058 1648 aa26.53■■□□□ 1.84
PDLIM7-210ENST00000503827 LTBP4Q8N2S1 1624 aa26.53■■□□□ 1.84
PDLIM7-210ENST00000503827 ABCA6Q8N139 1617 aa26.49■■□□□ 1.83
PDLIM7-210ENST00000503827 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
PDLIM7-210ENST00000503827 TRAPPC8Q9Y2L5 1435 aa26.48■■□□□ 1.83
PDLIM7-210ENST00000503827 MLH3Q9UHC1 1453 aa26.46■■□□□ 1.83
PDLIM7-210ENST00000503827 AGLP35573 1532 aa26.45■■□□□ 1.83
PDLIM7-210ENST00000503827 TROQ12816 1431 aaPredicted RBP26.45■■□□□ 1.82
PDLIM7-210ENST00000503827 CLIP1P30622 1438 aa26.44■■□□□ 1.82
PDLIM7-210ENST00000503827 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
PDLIM7-210ENST00000503827 CDC42BPBQ9Y5S2 1711 aa26.44■■□□□ 1.82
PDLIM7-210ENST00000503827 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
PDLIM7-210ENST00000503827 CAMSAP1Q5T5Y3 1602 aa26.37■■□□□ 1.81
PDLIM7-210ENST00000503827 ITSN2Q9NZM3 1697 aa26.36■■□□□ 1.81
PDLIM7-210ENST00000503827 LRRIQ1Q96JM4 1722 aa26.35■■□□□ 1.81
PDLIM7-210ENST00000503827 PREX2Q70Z35 1606 aa26.35■■□□□ 1.81
PDLIM7-210ENST00000503827 MROH2AA6NES4 1674 aa26.34■■□□□ 1.81
PDLIM7-210ENST00000503827 ABCC1P33527 1531 aa26.34■■□□□ 1.81
PDLIM7-210ENST00000503827 KIDINS220Q9ULH0 1771 aa26.34■■□□□ 1.81
PDLIM7-210ENST00000503827 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
PDLIM7-210ENST00000503827 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
PDLIM7-210ENST00000503827 NPATQ14207 1427 aa26.31■■□□□ 1.8
PDLIM7-210ENST00000503827 UBAP1LF5GYI3 381 aa26.31■■□□□ 1.8
PDLIM7-210ENST00000503827 SUPT6HQ7KZ85 1726 aaKnown RBP26.28■■□□□ 1.8
PDLIM7-210ENST00000503827 ZNF335Q9H4Z2 1342 aaPredicted RBP26.27■■□□□ 1.8
PDLIM7-210ENST00000503827 NCKAP5LQ9HCH0 1330 aa26.27■■□□□ 1.8
PDLIM7-210ENST00000503827 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
PDLIM7-210ENST00000503827 ZMYM3Q14202 1370 aa26.25■■□□□ 1.79
PDLIM7-210ENST00000503827 CDC42BPAQ5VT25 1732 aa26.23■■□□□ 1.79
PDLIM7-210ENST00000503827 ZNF142P52746 1687 aaPredicted RBP26.22■■□□□ 1.79
PDLIM7-210ENST00000503827 PKD2Q13563 968 aa26.21■■□□□ 1.79
PDLIM7-210ENST00000503827 PLA2R1Q13018 1463 aa26.21■■□□□ 1.79
PDLIM7-210ENST00000503827 MYO3AQ8NEV4 1616 aa26.21■■□□□ 1.79
PDLIM7-210ENST00000503827 CLTCQ00610 1675 aaKnown RBP26.2■■□□□ 1.78
PDLIM7-210ENST00000503827 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
PDLIM7-210ENST00000503827 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
PDLIM7-210ENST00000503827 CEP170BQ9Y4F5 1589 aaPredicted RBP26.16■■□□□ 1.78
PDLIM7-210ENST00000503827 TCOF1Q13428 1488 aaKnown RBP26.15■■□□□ 1.78
PDLIM7-210ENST00000503827 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.78
PDLIM7-210ENST00000503827 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
PDLIM7-210ENST00000503827 PPP6R1Q9UPN7 881 aa26.12■■□□□ 1.77
PDLIM7-210ENST00000503827 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
PDLIM7-210ENST00000503827 PTPRKQ15262 1439 aa26.1■■□□□ 1.77
PDLIM7-210ENST00000503827 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
PDLIM7-210ENST00000503827 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
PDLIM7-210ENST00000503827 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
PDLIM7-210ENST00000503827 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
PDLIM7-210ENST00000503827 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
PDLIM7-210ENST00000503827 A2MP01023 1474 aa26.07■■□□□ 1.76
PDLIM7-210ENST00000503827 HNRNPMP52272 730 aaKnown RBP eCLIP26.06■■□□□ 1.764e-8■■■■■ 27.6
PDLIM7-210ENST00000503827 GGT6Q6P531 493 aa26.06■■□□□ 1.76
PDLIM7-210ENST00000503827 HSPA1LP34931 641 aa26.05■■□□□ 1.76
PDLIM7-210ENST00000503827 INO80Q9ULG1 1556 aaPredicted RBP26.04■■□□□ 1.76
PDLIM7-210ENST00000503827 TOM1O60784 492 aa26.03■■□□□ 1.76
PDLIM7-210ENST00000503827 PIP4K2BP78356 416 aa26.03■■□□□ 1.76
PDLIM7-210ENST00000503827 GPATCH8Q9UKJ3 1502 aaKnown RBP26.02■■□□□ 1.76
PDLIM7-210ENST00000503827 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
PDLIM7-210ENST00000503827 A2ML1A8K2U0 1454 aa26.01■■□□□ 1.75
PDLIM7-210ENST00000503827 DNMT1P26358 1616 aaKnown RBP26.01■■□□□ 1.75
PDLIM7-210ENST00000503827 PLEKHH2Q8IVE3 1493 aa26.01■■□□□ 1.75
PDLIM7-210ENST00000503827 ADGBQ8N7X0 1667 aa26■■□□□ 1.75
PDLIM7-210ENST00000503827 CPS1P31327 1500 aa26■■□□□ 1.75
PDLIM7-210ENST00000503827 KIAA1107Q9UPP5 1409 aa26■■□□□ 1.75
PDLIM7-210ENST00000503827 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
PDLIM7-210ENST00000503827 CFDP1Q9UEE9 299 aaPredicted RBP25.95■■□□□ 1.74
PDLIM7-210ENST00000503827 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
PDLIM7-210ENST00000503827 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
PDLIM7-210ENST00000503827 NEURL4Q96JN8 1562 aa25.92■■□□□ 1.74
PDLIM7-210ENST00000503827 CCNB3Q8WWL7 1395 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms