RNA–Protein interactions for RNA: ENST00000502372.1

CNBP-206, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 5

Gene CNBP, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-206ENST00000502372 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
CNBP-206ENST00000502372 FER1L4A9Z1Z3 1794 aa17.61■□□□□ 0.41
CNBP-206ENST00000502372 PREX1Q8TCU6 1659 aa17.61■□□□□ 0.41
CNBP-206ENST00000502372 SAMD9Q5K651 1589 aa17.6■□□□□ 0.41
CNBP-206ENST00000502372 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
CNBP-206ENST00000502372 CFAP74Q9C0B2 1584 aa17.58■□□□□ 0.41
CNBP-206ENST00000502372 HECW1Q76N89 1606 aa17.58■□□□□ 0.4
CNBP-206ENST00000502372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.44e-8■■□□□ 14.5
CNBP-206ENST00000502372 PTPRTO14522 1441 aa17.56■□□□□ 0.4
CNBP-206ENST00000502372 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
CNBP-206ENST00000502372 LTBP4Q8N2S1 1624 aa17.55■□□□□ 0.4
CNBP-206ENST00000502372 ATP10AO60312 1499 aa17.54■□□□□ 0.4
CNBP-206ENST00000502372 IQSEC2Q5JU85 1478 aa17.53■□□□□ 0.4
CNBP-206ENST00000502372 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
CNBP-206ENST00000502372 C9orf84Q5VXU9 1444 aa17.52■□□□□ 0.4
CNBP-206ENST00000502372 SCAPERQ9BY12 1400 aa17.52■□□□□ 0.4
CNBP-206ENST00000502372 PLCH2O75038 1416 aa17.48■□□□□ 0.39
CNBP-206ENST00000502372 FOXD1Q16676 465 aa17.46■□□□□ 0.39
CNBP-206ENST00000502372 SETD1BQ9UPS6 1966 aaKnown RBP17.45■□□□□ 0.38
CNBP-206ENST00000502372 NCOA1Q15788 1441 aa17.41■□□□□ 0.38
CNBP-206ENST00000502372 TRAPPC8Q9Y2L5 1435 aa17.39■□□□□ 0.38
CNBP-206ENST00000502372 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
CNBP-206ENST00000502372 C3P01024 1663 aa17.37■□□□□ 0.37
CNBP-206ENST00000502372 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
CNBP-206ENST00000502372 KDM5CP41229 1560 aa17.36■□□□□ 0.37
CNBP-206ENST00000502372 REREQ9P2R6 1566 aa17.36■□□□□ 0.37
CNBP-206ENST00000502372 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
CNBP-206ENST00000502372 UBAP1LF5GYI3 381 aa17.35■□□□□ 0.37
CNBP-206ENST00000502372 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
CNBP-206ENST00000502372 CDK13Q14004 1512 aaKnown RBP17.35■□□□□ 0.37
CNBP-206ENST00000502372 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
CNBP-206ENST00000502372 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
CNBP-206ENST00000502372 ZNF335Q9H4Z2 1342 aaPredicted RBP17.32■□□□□ 0.36
CNBP-206ENST00000502372 AGLP35573 1532 aa17.31■□□□□ 0.36
CNBP-206ENST00000502372 CAMSAP1Q5T5Y3 1602 aa17.3■□□□□ 0.36
CNBP-206ENST00000502372 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
CNBP-206ENST00000502372 MYO5CQ9NQX4 1742 aa17.28■□□□□ 0.36
CNBP-206ENST00000502372 ABCA6Q8N139 1617 aa17.28■□□□□ 0.36
CNBP-206ENST00000502372 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
CNBP-206ENST00000502372 ESF1Q9H501 851 aaKnown RBP17.27■□□□□ 0.36
CNBP-206ENST00000502372 NPATQ14207 1427 aa17.27■□□□□ 0.35
CNBP-206ENST00000502372 CNTLNQ9NXG0 1405 aa17.27■□□□□ 0.35
CNBP-206ENST00000502372 MED1Q15648 1581 aaPredicted RBP17.26■□□□□ 0.35
CNBP-206ENST00000502372 HSPA1LP34931 641 aa17.24■□□□□ 0.35
CNBP-206ENST00000502372 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
CNBP-206ENST00000502372 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
CNBP-206ENST00000502372 ARHGAP5Q13017 1502 aa17.23■□□□□ 0.35
CNBP-206ENST00000502372 KIF14Q15058 1648 aa17.23■□□□□ 0.35
CNBP-206ENST00000502372 ADRA2BP18089 450 aa17.23■□□□□ 0.35
CNBP-206ENST00000502372 PKD2Q13563 968 aa17.22■□□□□ 0.35
CNBP-206ENST00000502372 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
CNBP-206ENST00000502372 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
CNBP-206ENST00000502372 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
CNBP-206ENST00000502372 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
CNBP-206ENST00000502372 TROQ12816 1431 aaPredicted RBP17.19■□□□□ 0.34
CNBP-206ENST00000502372 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
CNBP-206ENST00000502372 ABCC1P33527 1531 aa17.16■□□□□ 0.34
CNBP-206ENST00000502372 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
CNBP-206ENST00000502372 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
CNBP-206ENST00000502372 CDC42BPBQ9Y5S2 1711 aa17.14■□□□□ 0.33
CNBP-206ENST00000502372 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
CNBP-206ENST00000502372 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
CNBP-206ENST00000502372 TOM1O60784 492 aa17.13■□□□□ 0.33
CNBP-206ENST00000502372 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
CNBP-206ENST00000502372 CEP170BQ9Y4F5 1589 aaPredicted RBP17.13■□□□□ 0.33
CNBP-206ENST00000502372 EEA1Q15075 1411 aa17.13■□□□□ 0.33
CNBP-206ENST00000502372 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
CNBP-206ENST00000502372 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
CNBP-206ENST00000502372 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
CNBP-206ENST00000502372 CLIP1P30622 1438 aa17.11■□□□□ 0.33
CNBP-206ENST00000502372 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
CNBP-206ENST00000502372 PREX2Q70Z35 1606 aa17.08■□□□□ 0.32
CNBP-206ENST00000502372 CPS1P31327 1500 aa17.08■□□□□ 0.32
CNBP-206ENST00000502372 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
CNBP-206ENST00000502372 ALKQ9UM73 1620 aa17.06■□□□□ 0.32
CNBP-206ENST00000502372 ARHGAP35Q9NRY4 1499 aa17.05■□□□□ 0.32
CNBP-206ENST00000502372 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
CNBP-206ENST00000502372 CLTCQ00610 1675 aaKnown RBP17.04■□□□□ 0.32
CNBP-206ENST00000502372 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
CNBP-206ENST00000502372 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
CNBP-206ENST00000502372 PLXNC1O60486 1568 aa17.03■□□□□ 0.32
CNBP-206ENST00000502372 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
CNBP-206ENST00000502372 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.31
CNBP-206ENST00000502372 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
CNBP-206ENST00000502372 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
CNBP-206ENST00000502372 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
CNBP-206ENST00000502372 A2MP01023 1474 aa16.99■□□□□ 0.31
CNBP-206ENST00000502372 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
CNBP-206ENST00000502372 GGT6Q6P531 493 aa16.98■□□□□ 0.31
CNBP-206ENST00000502372 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
CNBP-206ENST00000502372 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
CNBP-206ENST00000502372 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.31
CNBP-206ENST00000502372 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
CNBP-206ENST00000502372 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
CNBP-206ENST00000502372 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
CNBP-206ENST00000502372 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
CNBP-206ENST00000502372 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
CNBP-206ENST00000502372 GPATCH8Q9UKJ3 1502 aaKnown RBP16.92■□□□□ 0.3
CNBP-206ENST00000502372 ANKLE2Q86XL3 938 aa16.92■□□□□ 0.3
CNBP-206ENST00000502372 MED14O60244 1454 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms