RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
PCBP4-218ENST00000498822 NBPF8Q3BBV2 869 aa22.31■■□□□ 1.16
PCBP4-218ENST00000498822 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
PCBP4-218ENST00000498822 FBLN2P98095 1184 aa22.31■■□□□ 1.16
PCBP4-218ENST00000498822 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
PCBP4-218ENST00000498822 IFT140Q96RY7 1462 aa22.3■■□□□ 1.16
PCBP4-218ENST00000498822 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
PCBP4-218ENST00000498822 RAPGEF6Q8TEU7 1601 aa22.3■■□□□ 1.16
PCBP4-218ENST00000498822 EIF4G2P78344 907 aaKnown RBP eCLIP22.29■■□□□ 1.16
PCBP4-218ENST00000498822 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
PCBP4-218ENST00000498822 ZNF777Q9ULD5 760 aaPredicted RBP22.29■■□□□ 1.16
PCBP4-218ENST00000498822 DNMT1P26358 1616 aaKnown RBP22.29■■□□□ 1.16
PCBP4-218ENST00000498822 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
PCBP4-218ENST00000498822 NEFLP07196 543 aa22.28■■□□□ 1.16
PCBP4-218ENST00000498822 PLB1Q6P1J6 1458 aa22.27■■□□□ 1.16
PCBP4-218ENST00000498822 SLC4A1APQ9BWU0 796 aaKnown RBP22.27■■□□□ 1.16
PCBP4-218ENST00000498822 CNGB1Q14028 1251 aaPredicted RBP22.25■■□□□ 1.15
PCBP4-218ENST00000498822 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
PCBP4-218ENST00000498822 KIF14Q15058 1648 aa22.24■■□□□ 1.15
PCBP4-218ENST00000498822 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
PCBP4-218ENST00000498822 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
PCBP4-218ENST00000498822 RPRD2Q5VT52 1461 aaKnown RBP22.21■■□□□ 1.15
PCBP4-218ENST00000498822 CAMSAP2Q08AD1 1489 aa22.2■■□□□ 1.14
PCBP4-218ENST00000498822 ZNF326Q5BKZ1 582 aaKnown RBP22.19■■□□□ 1.14
PCBP4-218ENST00000498822 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
PCBP4-218ENST00000498822 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
PCBP4-218ENST00000498822 CNTLNQ9NXG0 1405 aa22.19■■□□□ 1.14
PCBP4-218ENST00000498822 ROCK1Q13464 1354 aa22.18■■□□□ 1.14
PCBP4-218ENST00000498822 CCDC7Q96M83 1385 aa22.18■■□□□ 1.14
PCBP4-218ENST00000498822 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
PCBP4-218ENST00000498822 FAM9BQ8IZU0 186 aa22.16■■□□□ 1.14
PCBP4-218ENST00000498822 NCOA1Q15788 1441 aa22.16■■□□□ 1.14
PCBP4-218ENST00000498822 PZPP20742 1482 aa22.15■■□□□ 1.14
PCBP4-218ENST00000498822 CDK11AQ9UQ88 783 aaPredicted RBP22.15■■□□□ 1.14
PCBP4-218ENST00000498822 TROQ12816 1431 aaPredicted RBP22.14■■□□□ 1.14
PCBP4-218ENST00000498822 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
PCBP4-218ENST00000498822 KIF7Q2M1P5 1343 aa22.13■■□□□ 1.13
PCBP4-218ENST00000498822 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
PCBP4-218ENST00000498822 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
PCBP4-218ENST00000498822 PRKRIP1Q9H875 184 aaPredicted RBP22.12■■□□□ 1.13
PCBP4-218ENST00000498822 MRS2Q9HD23 443 aa22.09■■□□□ 1.13
PCBP4-218ENST00000498822 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
PCBP4-218ENST00000498822 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
PCBP4-218ENST00000498822 PKD2Q13563 968 aa22.07■■□□□ 1.12
PCBP4-218ENST00000498822 SPATA31E1Q6ZUB1 1445 aa22.07■■□□□ 1.12
PCBP4-218ENST00000498822 JPH4Q96JJ6 628 aa22.06■■□□□ 1.12
PCBP4-218ENST00000498822 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
PCBP4-218ENST00000498822 CROCC2H7BZ55 1655 aa22.05■■□□□ 1.12
PCBP4-218ENST00000498822 RBM19Q9Y4C8 960 aaKnown RBP22.05■■□□□ 1.12
PCBP4-218ENST00000498822 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
PCBP4-218ENST00000498822 BCORL1Q5H9F3 1711 aa22.02■■□□□ 1.12
PCBP4-218ENST00000498822 CDC42BPAQ5VT25 1732 aa22.01■■□□□ 1.11
PCBP4-218ENST00000498822 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
PCBP4-218ENST00000498822 POLR1AO95602 1720 aaPredicted RBP22■■□□□ 1.11
PCBP4-218ENST00000498822 KIAA1107Q9UPP5 1409 aa21.99■■□□□ 1.11
PCBP4-218ENST00000498822 MBD5Q9P267 1494 aa21.98■■□□□ 1.11
PCBP4-218ENST00000498822 ANKRD50Q9ULJ7 1429 aa21.98■■□□□ 1.11
PCBP4-218ENST00000498822 USP47Q96K76 1375 aa21.97■■□□□ 1.11
PCBP4-218ENST00000498822 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
PCBP4-218ENST00000498822 ANKRD30AQ9BXX3 1397 aa21.96■■□□□ 1.11
PCBP4-218ENST00000498822 HNRNPMP52272 730 aaKnown RBP eCLIP21.95■■□□□ 1.1
PCBP4-218ENST00000498822 ADGRL2O95490 1459 aa21.95■■□□□ 1.1
PCBP4-218ENST00000498822 NUP155O75694 1391 aa21.95■■□□□ 1.1
PCBP4-218ENST00000498822 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
PCBP4-218ENST00000498822 NUP160Q12769 1436 aa21.94■■□□□ 1.1
PCBP4-218ENST00000498822 PLEKHD1A6NEE1 506 aa21.94■■□□□ 1.1
PCBP4-218ENST00000498822 ATP10BO94823 1461 aa21.94■■□□□ 1.1
PCBP4-218ENST00000498822 C9orf84Q5VXU9 1444 aa21.92■■□□□ 1.1
PCBP4-218ENST00000498822 ANP32EQ9BTT0 268 aa21.91■■□□□ 1.1
PCBP4-218ENST00000498822 DHX29Q7Z478 1369 aaKnown RBP21.91■■□□□ 1.1
PCBP4-218ENST00000498822 ABCC10Q5T3U5 1492 aa21.91■■□□□ 1.1
PCBP4-218ENST00000498822 ABCA8O94911 1581 aa21.91■■□□□ 1.1
PCBP4-218ENST00000498822 KDM5CP41229 1560 aa21.89■■□□□ 1.09
PCBP4-218ENST00000498822 ZBED9Q6R2W3 1325 aa21.87■■□□□ 1.09
PCBP4-218ENST00000498822 B4GALNT3Q6L9W6 998 aa21.86■■□□□ 1.09
PCBP4-218ENST00000498822 CARD11Q9BXL7 1154 aa21.84■■□□□ 1.09
PCBP4-218ENST00000498822 KIF15Q9NS87 1388 aa21.84■■□□□ 1.09
PCBP4-218ENST00000498822 DCAF11Q8TEB1 546 aa21.83■■□□□ 1.09
PCBP4-218ENST00000498822 TSPY4P0CV99 314 aa21.82■■□□□ 1.08
PCBP4-218ENST00000498822 TSPY10P0CW01 314 aa21.82■■□□□ 1.08
PCBP4-218ENST00000498822 MSH5O43196 834 aa21.81■■□□□ 1.08
PCBP4-218ENST00000498822 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
PCBP4-218ENST00000498822 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
PCBP4-218ENST00000498822 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
PCBP4-218ENST00000498822 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.08
PCBP4-218ENST00000498822 SHANK2Q9UPX8 1470 aa21.77■■□□□ 1.08
PCBP4-218ENST00000498822 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
PCBP4-218ENST00000498822 PPP4R2Q9NY27 417 aa21.76■■□□□ 1.07
PCBP4-218ENST00000498822 PTPRGP23470 1445 aa21.75■■□□□ 1.07
PCBP4-218ENST00000498822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
PCBP4-218ENST00000498822 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
PCBP4-218ENST00000498822 SYCP2Q9BX26 1530 aa21.71■■□□□ 1.07
PCBP4-218ENST00000498822 FAM135AQ9P2D6 1515 aa21.71■■□□□ 1.07
PCBP4-218ENST00000498822 TTC37Q6PGP7 1564 aa21.7■■□□□ 1.06
PCBP4-218ENST00000498822 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
PCBP4-218ENST00000498822 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
PCBP4-218ENST00000498822 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
PCBP4-218ENST00000498822 CCDC141Q6ZP82 1450 aa21.69■■□□□ 1.06
PCBP4-218ENST00000498822 CHD1O14646 1710 aa21.69■■□□□ 1.06
PCBP4-218ENST00000498822 NBPF1Q3BBV0 1214 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms