RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 SPOCK2Q92563 424 aa10.19□□□□□ -0.78
NF1-217ENST00000498569 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
NF1-217ENST00000498569 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
NF1-217ENST00000498569 PDS5BQ9NTI5 1447 aa10.16□□□□□ -0.78
NF1-217ENST00000498569 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
NF1-217ENST00000498569 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
NF1-217ENST00000498569 HS3ST6Q96QI5 342 aa10.13□□□□□ -0.79
NF1-217ENST00000498569 MRC2Q9UBG0 1479 aa10.11□□□□□ -0.79
NF1-217ENST00000498569 FAM205CA6NFA0 338 aa10.11□□□□□ -0.79
NF1-217ENST00000498569 WDR62O43379 1518 aa10.11□□□□□ -0.79
NF1-217ENST00000498569 MROH2BQ7Z745 1585 aa10.09□□□□□ -0.79
NF1-217ENST00000498569 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
NF1-217ENST00000498569 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
NF1-217ENST00000498569 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
NF1-217ENST00000498569 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
NF1-217ENST00000498569 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
NF1-217ENST00000498569 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
NF1-217ENST00000498569 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
NF1-217ENST00000498569 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
NF1-217ENST00000498569 HOXB3P14651 431 aaPredicted RBP10.04□□□□□ -0.8
NF1-217ENST00000498569 WIZO95785 1651 aa10.03□□□□□ -0.8
NF1-217ENST00000498569 POTEB3A0JP26 581 aa10.03□□□□□ -0.8
NF1-217ENST00000498569 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
NF1-217ENST00000498569 POTEBQ6S5H4 581 aa10.03□□□□□ -0.8
NF1-217ENST00000498569 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
NF1-217ENST00000498569 PRDM2Q13029 1718 aa10.02□□□□□ -0.81
NF1-217ENST00000498569 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
NF1-217ENST00000498569 ERBB3P21860 1342 aa9.98□□□□□ -0.81
NF1-217ENST00000498569 FANCD2Q9BXW9 1451 aa9.98□□□□□ -0.81
NF1-217ENST00000498569 RIMBP3CA6NJZ7 1639 aa9.97□□□□□ -0.81
NF1-217ENST00000498569 RIMBP3BA6NNM3 1639 aa9.97□□□□□ -0.81
NF1-217ENST00000498569 RIMBP3Q9UFD9 1639 aa9.97□□□□□ -0.81
NF1-217ENST00000498569 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
NF1-217ENST00000498569 SOX12O15370 315 aa9.93□□□□□ -0.82
NF1-217ENST00000498569 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
NF1-217ENST00000498569 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
NF1-217ENST00000498569 URB2Q14146 1524 aaKnown RBP9.9□□□□□ -0.82
NF1-217ENST00000498569 CFTRP13569 1480 aa9.9□□□□□ -0.83
NF1-217ENST00000498569 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
NF1-217ENST00000498569 VGFO15240 615 aaPredicted RBP9.88□□□□□ -0.83
NF1-217ENST00000498569 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
NF1-217ENST00000498569 CHD1O14646 1710 aa9.87□□□□□ -0.83
NF1-217ENST00000498569 ARHGEF11O15085 1522 aa9.87□□□□□ -0.83
NF1-217ENST00000498569 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
NF1-217ENST00000498569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.85□□□□□ -0.83
NF1-217ENST00000498569 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
NF1-217ENST00000498569 ZFP91Q96JP5 570 aaPredicted RBP9.85□□□□□ -0.83
NF1-217ENST00000498569 EIF4G3O43432 1585 aaKnown RBP9.84□□□□□ -0.83
NF1-217ENST00000498569 PTGER2P43116 358 aa9.84□□□□□ -0.83
NF1-217ENST00000498569 ZNF687Q8N1G0 1237 aa9.84□□□□□ -0.83
NF1-217ENST00000498569 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
NF1-217ENST00000498569 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
NF1-217ENST00000498569 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
NF1-217ENST00000498569 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
NF1-217ENST00000498569 RNF25Q96BH1 459 aaPredicted RBP9.82□□□□□ -0.84
NF1-217ENST00000498569 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
NF1-217ENST00000498569 IFT140Q96RY7 1462 aa9.82□□□□□ -0.84
NF1-217ENST00000498569 ZNF608Q9ULD9 1512 aaPredicted RBP9.81□□□□□ -0.84
NF1-217ENST00000498569 NLRP6P59044 892 aa9.8□□□□□ -0.84
NF1-217ENST00000498569 TOPBP1Q92547 1522 aa9.77□□□□□ -0.85
NF1-217ENST00000498569 RSF1Q96T23 1441 aaPredicted RBP9.76□□□□□ -0.85
NF1-217ENST00000498569 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
NF1-217ENST00000498569 ARSIQ5FYB1 569 aa9.75□□□□□ -0.85
NF1-217ENST00000498569 CYB5RLQ6IPT4 315 aa9.75□□□□□ -0.85
NF1-217ENST00000498569 ABCC8Q09428 1581 aa9.74□□□□□ -0.85
NF1-217ENST00000498569 TARBP1Q13395 1621 aaKnown RBP9.74□□□□□ -0.85
NF1-217ENST00000498569 ARAP1Q96P48 1450 aa9.73□□□□□ -0.85
NF1-217ENST00000498569 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
NF1-217ENST00000498569 BCL11BQ9C0K0 894 aaPredicted RBP9.73□□□□□ -0.85
NF1-217ENST00000498569 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.86
NF1-217ENST00000498569 STK24Q9Y6E0 443 aa9.7□□□□□ -0.86
NF1-217ENST00000498569 CCDC88BA6NC98 1476 aa9.7□□□□□ -0.86
NF1-217ENST00000498569 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
NF1-217ENST00000498569 AQRO60306 1485 aaKnown RBP eCLIP9.68□□□□□ -0.86
NF1-217ENST00000498569 PBX2P40425 430 aa9.68□□□□□ -0.86
NF1-217ENST00000498569 LSM11P83369 360 aaKnown RBP eCLIP9.67□□□□□ -0.86
NF1-217ENST00000498569 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.86
NF1-217ENST00000498569 MFRPQ9BY79 579 aa9.66□□□□□ -0.86
NF1-217ENST00000498569 SYNJ1O43426 1573 aa9.66□□□□□ -0.86
NF1-217ENST00000498569 WDR97A6NE52 1622 aa9.65□□□□□ -0.86
NF1-217ENST00000498569 STK25O00506 426 aa9.65□□□□□ -0.86
NF1-217ENST00000498569 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.87
NF1-217ENST00000498569 KIF3CO14782 793 aa9.64□□□□□ -0.87
NF1-217ENST00000498569 CLASP1Q7Z460 1538 aa9.64□□□□□ -0.87
NF1-217ENST00000498569 C2orf72A6NCS6 295 aa9.63□□□□□ -0.87
NF1-217ENST00000498569 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
NF1-217ENST00000498569 SNAPC4Q5SXM2 1469 aa9.62□□□□□ -0.87
NF1-217ENST00000498569 NUDT7P0C024 238 aa9.62□□□□□ -0.87
NF1-217ENST00000498569 SLC34A2O95436 690 aa9.61□□□□□ -0.87
NF1-217ENST00000498569 TMC2Q8TDI7 906 aa9.61□□□□□ -0.87
NF1-217ENST00000498569 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
NF1-217ENST00000498569 ECM2O94769 699 aaPredicted RBP9.59□□□□□ -0.87
NF1-217ENST00000498569 PCDHGA4Q9Y5G9 962 aa9.59□□□□□ -0.87
NF1-217ENST00000498569 MAGI1Q96QZ7 1491 aaPredicted RBP9.59□□□□□ -0.87
NF1-217ENST00000498569 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
NF1-217ENST00000498569 SOGA1O94964 1423 aa9.57□□□□□ -0.88
NF1-217ENST00000498569 LHX6Q9UPM6 363 aa9.57□□□□□ -0.88
NF1-217ENST00000498569 TDRD9Q8NDG6 1382 aaKnown RBP9.57□□□□□ -0.88
NF1-217ENST00000498569 FGD5Q6ZNL6 1462 aa9.57□□□□□ -0.88
NF1-217ENST00000498569 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms