RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 CTTNBP2Q8WZ74 1663 aa12.76□□□□□ -0.37
RTCB-206ENST00000498434 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
RTCB-206ENST00000498434 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
RTCB-206ENST00000498434 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
RTCB-206ENST00000498434 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
RTCB-206ENST00000498434 FMN1Q68DA7 1419 aa12.71□□□□□ -0.38
RTCB-206ENST00000498434 PPARGC1BQ86YN6 1023 aaKnown RBP12.7□□□□□ -0.38
RTCB-206ENST00000498434 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
RTCB-206ENST00000498434 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
RTCB-206ENST00000498434 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
RTCB-206ENST00000498434 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
RTCB-206ENST00000498434 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
RTCB-206ENST00000498434 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
RTCB-206ENST00000498434 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
RTCB-206ENST00000498434 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
RTCB-206ENST00000498434 IQGAP2Q13576 1575 aa12.63□□□□□ -0.39
RTCB-206ENST00000498434 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
RTCB-206ENST00000498434 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
RTCB-206ENST00000498434 SAMD9Q5K651 1589 aa12.61□□□□□ -0.39
RTCB-206ENST00000498434 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
RTCB-206ENST00000498434 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
RTCB-206ENST00000498434 KIAA0586Q9BVV6 1533 aa12.61□□□□□ -0.39
RTCB-206ENST00000498434 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
RTCB-206ENST00000498434 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
RTCB-206ENST00000498434 CHMP7Q8WUX9 453 aaPredicted RBP12.6□□□□□ -0.39
RTCB-206ENST00000498434 TIAM1Q13009 1591 aa12.6□□□□□ -0.39
RTCB-206ENST00000498434 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
RTCB-206ENST00000498434 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
RTCB-206ENST00000498434 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
RTCB-206ENST00000498434 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
RTCB-206ENST00000498434 UGGT2Q9NYU1 1516 aa12.57□□□□□ -0.4
RTCB-206ENST00000498434 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
RTCB-206ENST00000498434 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
RTCB-206ENST00000498434 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
RTCB-206ENST00000498434 CFAP43Q8NDM7 1665 aa12.55□□□□□ -0.4
RTCB-206ENST00000498434 LRRC9Q6ZRR7 1453 aa12.55□□□□□ -0.4
RTCB-206ENST00000498434 ATP1B4Q9UN42 357 aaPredicted RBP12.55□□□□□ -0.4
RTCB-206ENST00000498434 PCF11O94913 1555 aaKnown RBP12.55□□□□□ -0.4
RTCB-206ENST00000498434 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
RTCB-206ENST00000498434 CCER1Q8TC90 406 aaPredicted RBP12.53□□□□□ -0.4
RTCB-206ENST00000498434 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
RTCB-206ENST00000498434 RRBP1Q9P2E9 1410 aaKnown RBP12.53□□□□□ -0.4
RTCB-206ENST00000498434 KANK4Q5T7N3 995 aaPredicted RBP12.52□□□□□ -0.41
RTCB-206ENST00000498434 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
RTCB-206ENST00000498434 TIE1P35590 1138 aa12.5□□□□□ -0.41
RTCB-206ENST00000498434 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
RTCB-206ENST00000498434 HECW1Q76N89 1606 aa12.5□□□□□ -0.41
RTCB-206ENST00000498434 NUP160Q12769 1436 aa12.49□□□□□ -0.41
RTCB-206ENST00000498434 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
RTCB-206ENST00000498434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
RTCB-206ENST00000498434 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
RTCB-206ENST00000498434 KIAA0556O60303 1618 aa12.45□□□□□ -0.42
RTCB-206ENST00000498434 PROM2Q8N271 834 aa12.45□□□□□ -0.42
RTCB-206ENST00000498434 EHBP1L1Q8N3D4 1523 aa12.45□□□□□ -0.42
RTCB-206ENST00000498434 MAP3K13O43283 966 aa12.44□□□□□ -0.42
RTCB-206ENST00000498434 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
RTCB-206ENST00000498434 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
RTCB-206ENST00000498434 JPH4Q96JJ6 628 aa12.43□□□□□ -0.42
RTCB-206ENST00000498434 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
RTCB-206ENST00000498434 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
RTCB-206ENST00000498434 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
RTCB-206ENST00000498434 SUPT6HQ7KZ85 1726 aaKnown RBP12.42□□□□□ -0.42
RTCB-206ENST00000498434 TTLL13PA6NNM8 815 aa12.4□□□□□ -0.42
RTCB-206ENST00000498434 EPRSP07814 1512 aaKnown RBP12.39□□□□□ -0.43
RTCB-206ENST00000498434 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
RTCB-206ENST00000498434 SEC24BO95487 1268 aa12.38□□□□□ -0.43
RTCB-206ENST00000498434 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
RTCB-206ENST00000498434 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
RTCB-206ENST00000498434 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
RTCB-206ENST00000498434 IER5LQ5T953 404 aa12.36□□□□□ -0.43
RTCB-206ENST00000498434 MYOM3Q5VTT5 1437 aa12.36□□□□□ -0.43
RTCB-206ENST00000498434 FGD6Q6ZV73 1430 aa12.36□□□□□ -0.43
RTCB-206ENST00000498434 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
RTCB-206ENST00000498434 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
RTCB-206ENST00000498434 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
RTCB-206ENST00000498434 CHD1O14646 1710 aa12.32□□□□□ -0.44
RTCB-206ENST00000498434 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
RTCB-206ENST00000498434 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
RTCB-206ENST00000498434 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
RTCB-206ENST00000498434 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
RTCB-206ENST00000498434 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
RTCB-206ENST00000498434 PTPRGP23470 1445 aa12.3□□□□□ -0.44
RTCB-206ENST00000498434 SETD5Q9C0A6 1442 aa12.3□□□□□ -0.44
RTCB-206ENST00000498434 ST18O60284 1047 aa12.3□□□□□ -0.44
RTCB-206ENST00000498434 ITGAEP38570 1179 aa12.29□□□□□ -0.44
RTCB-206ENST00000498434 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
RTCB-206ENST00000498434 PLEKHD1A6NEE1 506 aa12.28□□□□□ -0.44
RTCB-206ENST00000498434 SHROOM2Q13796 1616 aa12.28□□□□□ -0.44
RTCB-206ENST00000498434 TROQ12816 1431 aaPredicted RBP12.28□□□□□ -0.44
RTCB-206ENST00000498434 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.44
RTCB-206ENST00000498434 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
RTCB-206ENST00000498434 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
RTCB-206ENST00000498434 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
RTCB-206ENST00000498434 ABCA8O94911 1581 aa12.26□□□□□ -0.45
RTCB-206ENST00000498434 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
RTCB-206ENST00000498434 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
RTCB-206ENST00000498434 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
RTCB-206ENST00000498434 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
RTCB-206ENST00000498434 PLB1Q6P1J6 1458 aa12.25□□□□□ -0.45
RTCB-206ENST00000498434 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms