RNA–Protein interactions for RNA: ENST00000497530.5

ELL3-207, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-207ENST00000497530 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
ELL3-207ENST00000497530 PTPRTO14522 1441 aa25.01■■□□□ 1.59
ELL3-207ENST00000497530 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
ELL3-207ENST00000497530 SAMD9Q5K651 1589 aa25.01■■□□□ 1.59
ELL3-207ENST00000497530 HECW1Q76N89 1606 aa25■■□□□ 1.59
ELL3-207ENST00000497530 UHRF1BP1Q6BDS2 1440 aa24.98■■□□□ 1.59
ELL3-207ENST00000497530 SETD1BQ9UPS6 1966 aaKnown RBP24.98■■□□□ 1.59
ELL3-207ENST00000497530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.97■■□□□ 1.59
ELL3-207ENST00000497530 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
ELL3-207ENST00000497530 PLEKHD1A6NEE1 506 aa24.95■■□□□ 1.58
ELL3-207ENST00000497530 CEBPAP49715 358 aaPredicted RBP24.95■■□□□ 1.58
ELL3-207ENST00000497530 ATP10AO60312 1499 aa24.94■■□□□ 1.58
ELL3-207ENST00000497530 C9orf84Q5VXU9 1444 aa24.94■■□□□ 1.58
ELL3-207ENST00000497530 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
ELL3-207ENST00000497530 PLCH2O75038 1416 aa24.81■■□□□ 1.56
ELL3-207ENST00000497530 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
ELL3-207ENST00000497530 C3P01024 1663 aa24.76■■□□□ 1.55
ELL3-207ENST00000497530 TRAPPC8Q9Y2L5 1435 aa24.73■■□□□ 1.55
ELL3-207ENST00000497530 REREQ9P2R6 1566 aa24.71■■□□□ 1.55
ELL3-207ENST00000497530 ZNF518AQ6AHZ1 1483 aa24.71■■□□□ 1.55
ELL3-207ENST00000497530 UBAP1LF5GYI3 381 aa24.7■■□□□ 1.54
ELL3-207ENST00000497530 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.54
ELL3-207ENST00000497530 KDM5CP41229 1560 aa24.7■■□□□ 1.54
ELL3-207ENST00000497530 DIP2CQ9Y2E4 1556 aa24.67■■□□□ 1.54
ELL3-207ENST00000497530 MYO5CQ9NQX4 1742 aa24.65■■□□□ 1.54
ELL3-207ENST00000497530 AGLP35573 1532 aa24.65■■□□□ 1.54
ELL3-207ENST00000497530 CDK13Q14004 1512 aaKnown RBP24.64■■□□□ 1.53
ELL3-207ENST00000497530 CAMSAP1Q5T5Y3 1602 aa24.63■■□□□ 1.53
ELL3-207ENST00000497530 AFAP1Q8N556 730 aa24.62■■□□□ 1.53
ELL3-207ENST00000497530 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
ELL3-207ENST00000497530 MED1Q15648 1581 aaPredicted RBP24.62■■□□□ 1.53
ELL3-207ENST00000497530 ZNF335Q9H4Z2 1342 aaPredicted RBP24.61■■□□□ 1.53
ELL3-207ENST00000497530 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
ELL3-207ENST00000497530 ABCA6Q8N139 1617 aa24.58■■□□□ 1.53
ELL3-207ENST00000497530 RANGAP1P46060 587 aaPredicted RBP24.58■■□□□ 1.53
ELL3-207ENST00000497530 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
ELL3-207ENST00000497530 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.52
ELL3-207ENST00000497530 NPATQ14207 1427 aa24.57■■□□□ 1.52
ELL3-207ENST00000497530 MYT1LQ9UL68 1186 aa24.56■■□□□ 1.52
ELL3-207ENST00000497530 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
ELL3-207ENST00000497530 ARHGAP5Q13017 1502 aa24.52■■□□□ 1.52
ELL3-207ENST00000497530 PLA2R1Q13018 1463 aa24.51■■□□□ 1.51
ELL3-207ENST00000497530 PKD2Q13563 968 aa24.51■■□□□ 1.51
ELL3-207ENST00000497530 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
ELL3-207ENST00000497530 HSPA1LP34931 641 aa24.5■■□□□ 1.51
ELL3-207ENST00000497530 KIF14Q15058 1648 aa24.49■■□□□ 1.51
ELL3-207ENST00000497530 TCOF1Q13428 1488 aaKnown RBP24.47■■□□□ 1.51
ELL3-207ENST00000497530 CDK11AQ9UQ88 783 aaPredicted RBP24.47■■□□□ 1.51
ELL3-207ENST00000497530 ZNF142P52746 1687 aaPredicted RBP24.46■■□□□ 1.51
ELL3-207ENST00000497530 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
ELL3-207ENST00000497530 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
ELL3-207ENST00000497530 SCAF1Q9H7N4 1312 aaKnown RBP24.4■■□□□ 1.5
ELL3-207ENST00000497530 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
ELL3-207ENST00000497530 KIDINS220Q9ULH0 1771 aa24.4■■□□□ 1.5
ELL3-207ENST00000497530 TOM1O60784 492 aa24.4■■□□□ 1.5
ELL3-207ENST00000497530 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
ELL3-207ENST00000497530 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
ELL3-207ENST00000497530 CDC42BPBQ9Y5S2 1711 aa24.4■■□□□ 1.5
ELL3-207ENST00000497530 ABCC1P33527 1531 aa24.4■■□□□ 1.5
ELL3-207ENST00000497530 CEP170BQ9Y4F5 1589 aaPredicted RBP24.39■■□□□ 1.5
ELL3-207ENST00000497530 PIP4K2BP78356 416 aa24.39■■□□□ 1.49
ELL3-207ENST00000497530 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
ELL3-207ENST00000497530 CLIP1P30622 1438 aa24.37■■□□□ 1.49
ELL3-207ENST00000497530 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
ELL3-207ENST00000497530 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
ELL3-207ENST00000497530 CPS1P31327 1500 aa24.35■■□□□ 1.49
ELL3-207ENST00000497530 EEA1Q15075 1411 aa24.35■■□□□ 1.49
ELL3-207ENST00000497530 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
ELL3-207ENST00000497530 PTPRKQ15262 1439 aa24.33■■□□□ 1.49
ELL3-207ENST00000497530 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
ELL3-207ENST00000497530 CLTCQ00610 1675 aaKnown RBP24.29■■□□□ 1.48
ELL3-207ENST00000497530 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
ELL3-207ENST00000497530 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
ELL3-207ENST00000497530 A2ML1A8K2U0 1454 aa24.24■■□□□ 1.47
ELL3-207ENST00000497530 DNMT1P26358 1616 aaKnown RBP24.22■■□□□ 1.47
ELL3-207ENST00000497530 ALKQ9UM73 1620 aa24.22■■□□□ 1.47
ELL3-207ENST00000497530 PLXNC1O60486 1568 aa24.21■■□□□ 1.47
ELL3-207ENST00000497530 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
ELL3-207ENST00000497530 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.47
ELL3-207ENST00000497530 LRRIQ1Q96JM4 1722 aa24.19■■□□□ 1.46
ELL3-207ENST00000497530 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
ELL3-207ENST00000497530 SPAG9O60271 1321 aaKnown RBP24.17■■□□□ 1.46
ELL3-207ENST00000497530 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
ELL3-207ENST00000497530 A2MP01023 1474 aa24.15■■□□□ 1.46
ELL3-207ENST00000497530 VWDEQ8N2E2 1590 aa24.15■■□□□ 1.46
ELL3-207ENST00000497530 ATP7AQ04656 1500 aa24.14■■□□□ 1.45
ELL3-207ENST00000497530 RGS17Q9UGC6 210 aaPredicted RBP24.13■■□□□ 1.45
ELL3-207ENST00000497530 SYCP2Q9BX26 1530 aa24.12■■□□□ 1.45
ELL3-207ENST00000497530 GGT6Q6P531 493 aa24.12■■□□□ 1.45
ELL3-207ENST00000497530 INO80Q9ULG1 1556 aaPredicted RBP24.11■■□□□ 1.45
ELL3-207ENST00000497530 CCDC18Q5T9S5 1454 aa24.07■■□□□ 1.44
ELL3-207ENST00000497530 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
ELL3-207ENST00000497530 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
ELL3-207ENST00000497530 MED14O60244 1454 aa24.06■■□□□ 1.44
ELL3-207ENST00000497530 KIAA1107Q9UPP5 1409 aa24.05■■□□□ 1.44
ELL3-207ENST00000497530 HNRNPMP52272 730 aaKnown RBP eCLIP24.05■■□□□ 1.44
ELL3-207ENST00000497530 TNRQ92752 1358 aa24.04■■□□□ 1.44
ELL3-207ENST00000497530 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
ELL3-207ENST00000497530 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
ELL3-207ENST00000497530 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms