RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 ZNF335Q9H4Z2 1342 aaPredicted RBP25.34■■□□□ 1.65
RNF220-218ENST00000497469 SCAF1Q9H7N4 1312 aaKnown RBP25.34■■□□□ 1.65
RNF220-218ENST00000497469 HECW1Q76N89 1606 aa25.3■■□□□ 1.64
RNF220-218ENST00000497469 NCOA1Q15788 1441 aa25.29■■□□□ 1.64
RNF220-218ENST00000497469 CTTNBP2Q8WZ74 1663 aa25.28■■□□□ 1.64
RNF220-218ENST00000497469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.26■■□□□ 1.63
RNF220-218ENST00000497469 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
RNF220-218ENST00000497469 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
RNF220-218ENST00000497469 MAGI2Q86UL8 1455 aa25.25■■□□□ 1.63
RNF220-218ENST00000497469 P3H3Q8IVL6 736 aa25.23■■□□□ 1.63
RNF220-218ENST00000497469 CFAP74Q9C0B2 1584 aa25.21■■□□□ 1.63
RNF220-218ENST00000497469 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.62
RNF220-218ENST00000497469 SETD1BQ9UPS6 1966 aaKnown RBP25.19■■□□□ 1.62
RNF220-218ENST00000497469 ATP10AO60312 1499 aa25.19■■□□□ 1.62
RNF220-218ENST00000497469 C3P01024 1663 aa25.17■■□□□ 1.62
RNF220-218ENST00000497469 NCKAP5LQ9HCH0 1330 aa25.16■■□□□ 1.62
RNF220-218ENST00000497469 CAMSAP1Q5T5Y3 1602 aa25.15■■□□□ 1.62
RNF220-218ENST00000497469 RAPGEF6Q8TEU7 1601 aa25.09■■□□□ 1.61
RNF220-218ENST00000497469 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
RNF220-218ENST00000497469 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
RNF220-218ENST00000497469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.08■■□□□ 1.61
RNF220-218ENST00000497469 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
RNF220-218ENST00000497469 TRAPPC8Q9Y2L5 1435 aa25.08■■□□□ 1.61
RNF220-218ENST00000497469 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
RNF220-218ENST00000497469 RGS17Q9UGC6 210 aaPredicted RBP25.01■■□□□ 1.59
RNF220-218ENST00000497469 TOM1O60784 492 aa25■■□□□ 1.59
RNF220-218ENST00000497469 PLEKHD1A6NEE1 506 aa24.96■■□□□ 1.59
RNF220-218ENST00000497469 ESF1Q9H501 851 aaKnown RBP24.96■■□□□ 1.59
RNF220-218ENST00000497469 MYT1LQ9UL68 1186 aa24.91■■□□□ 1.58
RNF220-218ENST00000497469 PPP6R1Q9UPN7 881 aa24.91■■□□□ 1.58
RNF220-218ENST00000497469 DIP2CQ9Y2E4 1556 aa24.9■■□□□ 1.58
RNF220-218ENST00000497469 PKD2Q13563 968 aa24.87■■□□□ 1.57
RNF220-218ENST00000497469 ALKQ9UM73 1620 aa24.86■■□□□ 1.57
RNF220-218ENST00000497469 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
RNF220-218ENST00000497469 PLA2R1Q13018 1463 aa24.84■■□□□ 1.57
RNF220-218ENST00000497469 AFAP1Q8N556 730 aa24.84■■□□□ 1.57
RNF220-218ENST00000497469 PLCH2O75038 1416 aa24.84■■□□□ 1.57
RNF220-218ENST00000497469 SAMD9Q5K651 1589 aa24.84■■□□□ 1.57
RNF220-218ENST00000497469 SETD1AO15047 1707 aaKnown RBP24.83■■□□□ 1.57
RNF220-218ENST00000497469 POTEAQ6S8J7 498 aa24.83■■□□□ 1.57
RNF220-218ENST00000497469 ABCA6Q8N139 1617 aa24.83■■□□□ 1.56
RNF220-218ENST00000497469 SUPT6HQ7KZ85 1726 aaKnown RBP24.81■■□□□ 1.56
RNF220-218ENST00000497469 ZNF518AQ6AHZ1 1483 aa24.81■■□□□ 1.56
RNF220-218ENST00000497469 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
RNF220-218ENST00000497469 NPATQ14207 1427 aa24.8■■□□□ 1.56
RNF220-218ENST00000497469 CPS1P31327 1500 aa24.8■■□□□ 1.56
RNF220-218ENST00000497469 MYO3AQ8NEV4 1616 aa24.79■■□□□ 1.56
RNF220-218ENST00000497469 AGLP35573 1532 aa24.79■■□□□ 1.56
RNF220-218ENST00000497469 KDM5CP41229 1560 aa24.79■■□□□ 1.56
RNF220-218ENST00000497469 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
RNF220-218ENST00000497469 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
RNF220-218ENST00000497469 CEP170BQ9Y4F5 1589 aaPredicted RBP24.76■■□□□ 1.55
RNF220-218ENST00000497469 PTPRKQ15262 1439 aa24.76■■□□□ 1.55
RNF220-218ENST00000497469 SHANK2Q9UPX8 1470 aa24.75■■□□□ 1.55
RNF220-218ENST00000497469 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
RNF220-218ENST00000497469 PRXQ9BXM0 1461 aa24.73■■□□□ 1.55
RNF220-218ENST00000497469 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
RNF220-218ENST00000497469 ZMYM3Q14202 1370 aa24.71■■□□□ 1.55
RNF220-218ENST00000497469 CDK13Q14004 1512 aaKnown RBP24.71■■□□□ 1.55
RNF220-218ENST00000497469 MYO5CQ9NQX4 1742 aa24.69■■□□□ 1.54
RNF220-218ENST00000497469 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
RNF220-218ENST00000497469 NEURL4Q96JN8 1562 aa24.63■■□□□ 1.53
RNF220-218ENST00000497469 MLH3Q9UHC1 1453 aa24.63■■□□□ 1.53
RNF220-218ENST00000497469 ARHGAP5Q13017 1502 aa24.62■■□□□ 1.53
RNF220-218ENST00000497469 VWDEQ8N2E2 1590 aa24.61■■□□□ 1.53
RNF220-218ENST00000497469 CLTCQ00610 1675 aaKnown RBP24.59■■□□□ 1.53
RNF220-218ENST00000497469 POLR1AO95602 1720 aaPredicted RBP24.58■■□□□ 1.53
RNF220-218ENST00000497469 DNMT1P26358 1616 aaKnown RBP24.56■■□□□ 1.52
RNF220-218ENST00000497469 KIF14Q15058 1648 aa24.56■■□□□ 1.52
RNF220-218ENST00000497469 SRCAPQ6ZRS2 3230 aa24.55■■□□□ 1.52
RNF220-218ENST00000497469 UPF1Q92900 1129 aaKnown RBP eCLIP24.55■■□□□ 1.52
RNF220-218ENST00000497469 A2ML1A8K2U0 1454 aa24.52■■□□□ 1.52
RNF220-218ENST00000497469 RNF17Q9BXT8 1623 aaKnown RBP24.52■■□□□ 1.52
RNF220-218ENST00000497469 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
RNF220-218ENST00000497469 LRRC7Q96NW7 1537 aa24.48■■□□□ 1.51
RNF220-218ENST00000497469 STRCP1A6NGW2 1772 aa24.45■■□□□ 1.5
RNF220-218ENST00000497469 ABCC1P33527 1531 aa24.44■■□□□ 1.5
RNF220-218ENST00000497469 ITSN2Q9NZM3 1697 aa24.43■■□□□ 1.5
RNF220-218ENST00000497469 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
RNF220-218ENST00000497469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
RNF220-218ENST00000497469 CDC42BPBQ9Y5S2 1711 aa24.39■■□□□ 1.5
RNF220-218ENST00000497469 NPHP4O75161 1426 aaPredicted RBP24.39■■□□□ 1.5
RNF220-218ENST00000497469 GGT6Q6P531 493 aa24.38■■□□□ 1.49
RNF220-218ENST00000497469 ANKLE2Q86XL3 938 aa24.37■■□□□ 1.49
RNF220-218ENST00000497469 TRIM52Q96A61 297 aa24.37■■□□□ 1.49
RNF220-218ENST00000497469 SYNMO15061 1565 aa24.37■■□□□ 1.49
RNF220-218ENST00000497469 SAMD9LQ8IVG5 1584 aa24.32■■□□□ 1.48
RNF220-218ENST00000497469 IQGAP1P46940 1657 aa24.3■■□□□ 1.48
RNF220-218ENST00000497469 TNRQ92752 1358 aa24.29■■□□□ 1.48
RNF220-218ENST00000497469 TROQ12816 1431 aaPredicted RBP24.29■■□□□ 1.48
RNF220-218ENST00000497469 FBXO31Q5XUX0 539 aaPredicted RBP24.29■■□□□ 1.48
RNF220-218ENST00000497469 MED14O60244 1454 aa24.29■■□□□ 1.48
RNF220-218ENST00000497469 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
RNF220-218ENST00000497469 PLXNC1O60486 1568 aa24.28■■□□□ 1.48
RNF220-218ENST00000497469 DEPDC5O75140 1603 aa24.26■■□□□ 1.47
RNF220-218ENST00000497469 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
RNF220-218ENST00000497469 SPAG9O60271 1321 aaKnown RBP24.24■■□□□ 1.47
RNF220-218ENST00000497469 CLIP1P30622 1438 aa24.24■■□□□ 1.47
RNF220-218ENST00000497469 FAM135BQ49AJ0 1406 aa24.23■■□□□ 1.47
RNF220-218ENST00000497469 A2MP01023 1474 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms