RNA–Protein interactions for RNA: ENST00000497138.5

PPP4R1L-209, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 4,680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-209ENST00000497138 LAS1LQ9Y4W2 734 aaKnown RBP8.7□□□□□ -1.02
PPP4R1L-209ENST00000497138 FAM9BQ8IZU0 186 aa8.7□□□□□ -1.02
PPP4R1L-209ENST00000497138 UPF2Q9HAU5 1272 aaKnown RBP8.69□□□□□ -1.02
PPP4R1L-209ENST00000497138 STK26Q9P289 416 aa8.69□□□□□ -1.02
PPP4R1L-209ENST00000497138 SNAPC4Q5SXM2 1469 aa8.69□□□□□ -1.02
PPP4R1L-209ENST00000497138 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1L-209ENST00000497138 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
PPP4R1L-209ENST00000497138 TNNT2P45379 298 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1L-209ENST00000497138 CLSTN1O94985 981 aa8.68□□□□□ -1.02
PPP4R1L-209ENST00000497138 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
PPP4R1L-209ENST00000497138 GTF2E1P29083 439 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1L-209ENST00000497138 KANK1Q14678 1352 aa8.67□□□□□ -1.02
PPP4R1L-209ENST00000497138 TARBP1Q13395 1621 aaKnown RBP8.67□□□□□ -1.02
PPP4R1L-209ENST00000497138 RAPGEF2Q9Y4G8 1499 aa8.67□□□□□ -1.02
PPP4R1L-209ENST00000497138 MAPK8IP3Q9UPT6 1336 aa8.66□□□□□ -1.02
PPP4R1L-209ENST00000497138 CDCA8Q53HL2 280 aa8.66□□□□□ -1.02
PPP4R1L-209ENST00000497138 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
PPP4R1L-209ENST00000497138 EIF4G3O43432 1585 aaKnown RBP8.65□□□□□ -1.02
PPP4R1L-209ENST00000497138 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
PPP4R1L-209ENST00000497138 NUDCQ9Y266 331 aa8.65□□□□□ -1.02
PPP4R1L-209ENST00000497138 OS9Q13438 667 aaPredicted RBP8.65□□□□□ -1.03
PPP4R1L-209ENST00000497138 JPH4Q96JJ6 628 aa8.65□□□□□ -1.03
PPP4R1L-209ENST00000497138 U2SURPO15042 1029 aaKnown RBP8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 SF3B2Q13435 895 aaKnown RBP8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 RTN4Q9NQC3 1192 aaKnown RBP8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 FOXD1Q16676 465 aa8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 KNSTRNQ9Y448 316 aa8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 SUPT16HQ9Y5B9 1047 aaKnown RBP8.64□□□□□ -1.03
PPP4R1L-209ENST00000497138 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
PPP4R1L-209ENST00000497138 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
PPP4R1L-209ENST00000497138 SYNJ2O15056 1496 aa8.63□□□□□ -1.03
PPP4R1L-209ENST00000497138 DEKP35659 375 aaKnown RBP8.62□□□□□ -1.03
PPP4R1L-209ENST00000497138 EVA1CP58658 441 aa8.62□□□□□ -1.03
PPP4R1L-209ENST00000497138 EFCAB2Q5VUJ9 269 aa8.62□□□□□ -1.03
PPP4R1L-209ENST00000497138 NGDNQ8NEJ9 315 aaKnown RBP8.62□□□□□ -1.03
PPP4R1L-209ENST00000497138 HNRNPUQ00839 825 aaKnown RBP eCLIP8.6□□□□□ -1.03
PPP4R1L-209ENST00000497138 ANP32BQ92688 251 aaKnown RBP8.6□□□□□ -1.03
PPP4R1L-209ENST00000497138 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
PPP4R1L-209ENST00000497138 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
PPP4R1L-209ENST00000497138 FGD1P98174 961 aa8.6□□□□□ -1.03
PPP4R1L-209ENST00000497138 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
PPP4R1L-209ENST00000497138 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
PPP4R1L-209ENST00000497138 GRIN2AQ12879 1464 aa8.59□□□□□ -1.03
PPP4R1L-209ENST00000497138 PRXQ9BXM0 1461 aa8.59□□□□□ -1.03
PPP4R1L-209ENST00000497138 ABCA5Q8WWZ7 1642 aa8.59□□□□□ -1.03
PPP4R1L-209ENST00000497138 RTF1Q92541 710 aaKnown RBP8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 MRS2Q9HD23 443 aa8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 TNIKQ9UKE5 1360 aa8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 CARD11Q9BXL7 1154 aa8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 KIF3BO15066 747 aa8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 CCNB3Q8WWL7 1395 aa8.58□□□□□ -1.04
PPP4R1L-209ENST00000497138 CLIP1P30622 1438 aa8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 CARMIL2Q6F5E8 1435 aa8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 CUL7Q14999 1698 aa8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 WASHC2CQ9Y4E1 1318 aa8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 WDR97A6NE52 1622 aa8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 PBRM1Q86U86 1689 aa8.57□□□□□ -1.04
PPP4R1L-209ENST00000497138 LTV1Q96GA3 475 aaPredicted RBP8.56□□□□□ -1.04
PPP4R1L-209ENST00000497138 SYTL4Q96C24 671 aaPredicted RBP8.56□□□□□ -1.04
PPP4R1L-209ENST00000497138 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
PPP4R1L-209ENST00000497138 FRAT2O75474 233 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 KCNJ4P48050 445 aa8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 ZRSR1Q15695 479 aaKnown RBP8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 HIRIP3Q9BW71 556 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 ERICH6BQ5W0A0 696 aa8.55□□□□□ -1.04
PPP4R1L-209ENST00000497138 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
PPP4R1L-209ENST00000497138 ADAMTS12P58397 1594 aa8.54□□□□□ -1.04
PPP4R1L-209ENST00000497138 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
PPP4R1L-209ENST00000497138 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
PPP4R1L-209ENST00000497138 FTSJ3Q8IY81 847 aaKnown RBP8.54□□□□□ -1.04
PPP4R1L-209ENST00000497138 KIAA0586Q9BVV6 1533 aa8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 TAF7LQ5H9L4 462 aa8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 CCDC136Q96JN2 1154 aa8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 PIP4K2BP78356 416 aa8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 PRG4Q92954 1404 aaPredicted RBP8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 IRX6P78412 446 aaPredicted RBP8.53□□□□□ -1.04
PPP4R1L-209ENST00000497138 KIF21BO75037 1637 aa8.52□□□□□ -1.05
PPP4R1L-209ENST00000497138 CHMP3Q9Y3E7 222 aa8.52□□□□□ -1.05
PPP4R1L-209ENST00000497138 ATF3P18847 181 aa8.51□□□□□ -1.05
PPP4R1L-209ENST00000497138 TPRNQ4KMQ1 711 aa8.51□□□□□ -1.05
PPP4R1L-209ENST00000497138 CWC22Q9HCG8 908 aaKnown RBP8.51□□□□□ -1.05
PPP4R1L-209ENST00000497138 PTPRGP23470 1445 aa8.51□□□□□ -1.05
PPP4R1L-209ENST00000497138 DCAF11Q8TEB1 546 aa8.51□□□□□ -1.05
PPP4R1L-209ENST00000497138 AMPHP49418 695 aa8.5□□□□□ -1.05
PPP4R1L-209ENST00000497138 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
PPP4R1L-209ENST00000497138 GORABQ5T7V8 394 aa8.5□□□□□ -1.05
PPP4R1L-209ENST00000497138 PNNQ9H307 717 aaKnown RBP8.5□□□□□ -1.05
PPP4R1L-209ENST00000497138 CHD1O14646 1710 aa8.49□□□□□ -1.05
PPP4R1L-209ENST00000497138 FHOD3Q2V2M9 1422 aa8.49□□□□□ -1.05
PPP4R1L-209ENST00000497138 NUTM2BA6NNL0 878 aaPredicted RBP8.49□□□□□ -1.05
PPP4R1L-209ENST00000497138 NUTM2EB1AL46 878 aaPredicted RBP8.49□□□□□ -1.05
PPP4R1L-209ENST00000497138 NUTM2AQ8IVF1 878 aaPredicted RBP8.49□□□□□ -1.05
PPP4R1L-209ENST00000497138 NUP160Q12769 1436 aa8.49□□□□□ -1.05
PPP4R1L-209ENST00000497138 SPAG9O60271 1321 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms