RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 EEA1Q15075 1411 aa21.51■■□□□ 1.03
PHGDH-207ENST00000496756 SCAPERQ9BY12 1400 aa21.51■■□□□ 1.03
PHGDH-207ENST00000496756 PLCH2O75038 1416 aa21.5■■□□□ 1.03
PHGDH-207ENST00000496756 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
PHGDH-207ENST00000496756 ATP10AO60312 1499 aa21.49■■□□□ 1.03
PHGDH-207ENST00000496756 PREX1Q8TCU6 1659 aa21.48■■□□□ 1.03
PHGDH-207ENST00000496756 ARHGEF12Q9NZN5 1544 aa21.48■■□□□ 1.03
PHGDH-207ENST00000496756 C9orf84Q5VXU9 1444 aa21.47■■□□□ 1.03
PHGDH-207ENST00000496756 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
PHGDH-207ENST00000496756 DISP3Q9P2K9 1392 aa21.43■■□□□ 1.02
PHGDH-207ENST00000496756 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
PHGDH-207ENST00000496756 SETD1BQ9UPS6 1966 aaKnown RBP21.4■■□□□ 1.02
PHGDH-207ENST00000496756 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-207ENST00000496756 UHRF1BP1Q6BDS2 1440 aa21.39■■□□□ 1.02
PHGDH-207ENST00000496756 MYO5CQ9NQX4 1742 aa21.39■■□□□ 1.01
PHGDH-207ENST00000496756 CDK11AQ9UQ88 783 aaPredicted RBP21.39■■□□□ 1.01
PHGDH-207ENST00000496756 ZNF518AQ6AHZ1 1483 aa21.39■■□□□ 1.01
PHGDH-207ENST00000496756 SOCS7O14512 581 aa21.38■■□□□ 1.01
PHGDH-207ENST00000496756 STRCQ7RTU9 1775 aa21.37■■□□□ 1.01
PHGDH-207ENST00000496756 ILDR2Q71H61 639 aa21.35■■□□□ 1.01
PHGDH-207ENST00000496756 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
PHGDH-207ENST00000496756 FMN1Q68DA7 1419 aa21.33■■□□□ 1.01
PHGDH-207ENST00000496756 KDM5CP41229 1560 aa21.32■■□□□ 1
PHGDH-207ENST00000496756 MYT1LQ9UL68 1186 aa21.32■■□□□ 1
PHGDH-207ENST00000496756 PTPRTO14522 1441 aa21.31■■□□□ 1
PHGDH-207ENST00000496756 AFAP1Q8N556 730 aa21.31■■□□□ 1
PHGDH-207ENST00000496756 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
PHGDH-207ENST00000496756 KIF14Q15058 1648 aa21.3■■□□□ 1
PHGDH-207ENST00000496756 REREQ9P2R6 1566 aa21.29■■□□□ 1
PHGDH-207ENST00000496756 ESF1Q9H501 851 aaKnown RBP21.29■■□□□ 1
PHGDH-207ENST00000496756 CLIP1P30622 1438 aa21.27■■□□□ 1
PHGDH-207ENST00000496756 TROQ12816 1431 aaPredicted RBP21.27■■□□□ 1
PHGDH-207ENST00000496756 DIP2CQ9Y2E4 1556 aa21.27■□□□□ 0.99
PHGDH-207ENST00000496756 MLH3Q9UHC1 1453 aa21.25■□□□□ 0.99
PHGDH-207ENST00000496756 SPATA31D1Q6ZQQ2 1576 aa21.24■□□□□ 0.99
PHGDH-207ENST00000496756 TRAPPC8Q9Y2L5 1435 aa21.24■□□□□ 0.99
PHGDH-207ENST00000496756 C3P01024 1663 aa21.24■□□□□ 0.99
PHGDH-207ENST00000496756 IQSEC2Q5JU85 1478 aa21.23■□□□□ 0.99
PHGDH-207ENST00000496756 AGLP35573 1532 aa21.23■□□□□ 0.99
PHGDH-207ENST00000496756 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
PHGDH-207ENST00000496756 ABCA6Q8N139 1617 aa21.2■□□□□ 0.98
PHGDH-207ENST00000496756 CNTLNQ9NXG0 1405 aa21.2■□□□□ 0.98
PHGDH-207ENST00000496756 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
PHGDH-207ENST00000496756 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
PHGDH-207ENST00000496756 NCOA1Q15788 1441 aa21.17■□□□□ 0.98
PHGDH-207ENST00000496756 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
PHGDH-207ENST00000496756 ABCC1P33527 1531 aa21.14■□□□□ 0.98
PHGDH-207ENST00000496756 PREX2Q70Z35 1606 aa21.13■□□□□ 0.97
PHGDH-207ENST00000496756 NPATQ14207 1427 aa21.12■□□□□ 0.97
PHGDH-207ENST00000496756 ITSN2Q9NZM3 1697 aa21.11■□□□□ 0.97
PHGDH-207ENST00000496756 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
PHGDH-207ENST00000496756 KIDINS220Q9ULH0 1771 aa21.1■□□□□ 0.97
PHGDH-207ENST00000496756 CAMSAP1Q5T5Y3 1602 aa21.09■□□□□ 0.97
PHGDH-207ENST00000496756 LRRIQ1Q96JM4 1722 aa21.09■□□□□ 0.97
PHGDH-207ENST00000496756 MROH2AA6NES4 1674 aa21.09■□□□□ 0.97
PHGDH-207ENST00000496756 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
PHGDH-207ENST00000496756 ZMYM3Q14202 1370 aa21.06■□□□□ 0.96
PHGDH-207ENST00000496756 UBAP1LF5GYI3 381 aa21.04■□□□□ 0.96
PHGDH-207ENST00000496756 PKD2Q13563 968 aa21.03■□□□□ 0.96
PHGDH-207ENST00000496756 SAMD9LQ8IVG5 1584 aa21.02■□□□□ 0.96
PHGDH-207ENST00000496756 CDC42BPAQ5VT25 1732 aa21.02■□□□□ 0.96
PHGDH-207ENST00000496756 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
PHGDH-207ENST00000496756 ZNF335Q9H4Z2 1342 aaPredicted RBP21.02■□□□□ 0.95
PHGDH-207ENST00000496756 NCKAP5LQ9HCH0 1330 aa21.02■□□□□ 0.95
PHGDH-207ENST00000496756 SPAG9O60271 1321 aaKnown RBP21.01■□□□□ 0.95
PHGDH-207ENST00000496756 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
PHGDH-207ENST00000496756 LOC105371045A0A1W2PR82 267 aa21■□□□□ 0.95
PHGDH-207ENST00000496756 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-207ENST00000496756 ZNF142P52746 1687 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-207ENST00000496756 SUPT6HQ7KZ85 1726 aaKnown RBP20.97■□□□□ 0.95
PHGDH-207ENST00000496756 MYO3AQ8NEV4 1616 aa20.96■□□□□ 0.95
PHGDH-207ENST00000496756 TCOF1Q13428 1488 aaKnown RBP20.95■□□□□ 0.94
PHGDH-207ENST00000496756 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
PHGDH-207ENST00000496756 CEP170BQ9Y4F5 1589 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-207ENST00000496756 CLTCQ00610 1675 aaKnown RBP20.95■□□□□ 0.94
PHGDH-207ENST00000496756 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
PHGDH-207ENST00000496756 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
PHGDH-207ENST00000496756 PTPRKQ15262 1439 aa20.94■□□□□ 0.94
PHGDH-207ENST00000496756 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
PHGDH-207ENST00000496756 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.944e-8■■■□□ 17.4
PHGDH-207ENST00000496756 A2MP01023 1474 aa20.93■□□□□ 0.94
PHGDH-207ENST00000496756 PLEKHH2Q8IVE3 1493 aa20.93■□□□□ 0.94
PHGDH-207ENST00000496756 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
PHGDH-207ENST00000496756 GPATCH8Q9UKJ3 1502 aaKnown RBP20.92■□□□□ 0.94
PHGDH-207ENST00000496756 GGT6Q6P531 493 aa20.91■□□□□ 0.94
PHGDH-207ENST00000496756 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
PHGDH-207ENST00000496756 INO80Q9ULG1 1556 aaPredicted RBP20.89■□□□□ 0.94
PHGDH-207ENST00000496756 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-207ENST00000496756 A2ML1A8K2U0 1454 aa20.86■□□□□ 0.93
PHGDH-207ENST00000496756 TOM1O60784 492 aa20.85■□□□□ 0.93
PHGDH-207ENST00000496756 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
PHGDH-207ENST00000496756 ADGBQ8N7X0 1667 aa20.83■□□□□ 0.93
PHGDH-207ENST00000496756 SCAF1Q9H7N4 1312 aaKnown RBP20.83■□□□□ 0.93
PHGDH-207ENST00000496756 CPS1P31327 1500 aa20.83■□□□□ 0.92
PHGDH-207ENST00000496756 HSPA1LP34931 641 aa20.82■□□□□ 0.92
PHGDH-207ENST00000496756 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
PHGDH-207ENST00000496756 PIP4K2BP78356 416 aa20.8■□□□□ 0.92
PHGDH-207ENST00000496756 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-207ENST00000496756 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-207ENST00000496756 SHANK2Q9UPX8 1470 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms