RNA–Protein interactions for RNA: ENST00000496675.1

PCNX2-216, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-216ENST00000496675 CFAP74Q9C0B2 1584 aa30■■■□□ 2.39
PCNX2-216ENST00000496675 ARHGEF12Q9NZN5 1544 aa29.99■■■□□ 2.39
PCNX2-216ENST00000496675 LTBP4Q8N2S1 1624 aa29.97■■■□□ 2.39
PCNX2-216ENST00000496675 SETD1BQ9UPS6 1966 aaKnown RBP29.96■■■□□ 2.39
PCNX2-216ENST00000496675 RAPGEF6Q8TEU7 1601 aa29.95■■■□□ 2.38
PCNX2-216ENST00000496675 PLEKHD1A6NEE1 506 aa29.94■■■□□ 2.38
PCNX2-216ENST00000496675 HECW1Q76N89 1606 aa29.93■■■□□ 2.38
PCNX2-216ENST00000496675 ATP10AO60312 1499 aa29.9■■■□□ 2.38
PCNX2-216ENST00000496675 UBAP1LF5GYI3 381 aa29.89■■■□□ 2.38
PCNX2-216ENST00000496675 C9orf84Q5VXU9 1444 aa29.86■■■□□ 2.37
PCNX2-216ENST00000496675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.83■■■□□ 2.37
PCNX2-216ENST00000496675 NUP153P49790 1475 aaKnown RBP29.83■■■□□ 2.37
PCNX2-216ENST00000496675 SCAPERQ9BY12 1400 aa29.83■■■□□ 2.37
PCNX2-216ENST00000496675 PRXQ9BXM0 1461 aa29.79■■■□□ 2.36
PCNX2-216ENST00000496675 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
PCNX2-216ENST00000496675 NCOA1Q15788 1441 aa29.73■■■□□ 2.35
PCNX2-216ENST00000496675 ESF1Q9H501 851 aaKnown RBP29.71■■■□□ 2.35
PCNX2-216ENST00000496675 TRAPPC8Q9Y2L5 1435 aa29.69■■■□□ 2.34
PCNX2-216ENST00000496675 MED1Q15648 1581 aaPredicted RBP29.68■■■□□ 2.34
PCNX2-216ENST00000496675 ZNF335Q9H4Z2 1342 aaPredicted RBP29.68■■■□□ 2.34
PCNX2-216ENST00000496675 C3P01024 1663 aa29.66■■■□□ 2.34
PCNX2-216ENST00000496675 PLCH2O75038 1416 aa29.66■■■□□ 2.34
PCNX2-216ENST00000496675 MYT1LQ9UL68 1186 aa29.66■■■□□ 2.34
PCNX2-216ENST00000496675 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
PCNX2-216ENST00000496675 HSPA1LP34931 641 aa29.61■■■□□ 2.33
PCNX2-216ENST00000496675 PHF23Q9BUL5 403 aaPredicted RBP29.61■■■□□ 2.33
PCNX2-216ENST00000496675 SCAF1Q9H7N4 1312 aaKnown RBP29.61■■■□□ 2.33
PCNX2-216ENST00000496675 CAMSAP1Q5T5Y3 1602 aa29.59■■■□□ 2.33
PCNX2-216ENST00000496675 RANGAP1P46060 587 aaPredicted RBP29.58■■■□□ 2.33
PCNX2-216ENST00000496675 NCKAP5LQ9HCH0 1330 aa29.58■■■□□ 2.33
PCNX2-216ENST00000496675 ZNF518AQ6AHZ1 1483 aa29.55■■■□□ 2.32
PCNX2-216ENST00000496675 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
PCNX2-216ENST00000496675 PIP4K2BP78356 416 aa29.53■■■□□ 2.32
PCNX2-216ENST00000496675 REREQ9P2R6 1566 aa29.48■■■□□ 2.31
PCNX2-216ENST00000496675 DIP2CQ9Y2E4 1556 aa29.48■■■□□ 2.31
PCNX2-216ENST00000496675 CNTLNQ9NXG0 1405 aa29.47■■■□□ 2.31
PCNX2-216ENST00000496675 TOM1O60784 492 aa29.47■■■□□ 2.31
PCNX2-216ENST00000496675 PKD2Q13563 968 aa29.47■■■□□ 2.31
PCNX2-216ENST00000496675 KDM5CP41229 1560 aa29.46■■■□□ 2.31
PCNX2-216ENST00000496675 AGLP35573 1532 aa29.45■■■□□ 2.31
PCNX2-216ENST00000496675 MYO5CQ9NQX4 1742 aa29.44■■■□□ 2.3
PCNX2-216ENST00000496675 CDK13Q14004 1512 aaKnown RBP29.42■■■□□ 2.3
PCNX2-216ENST00000496675 NPATQ14207 1427 aa29.42■■■□□ 2.3
PCNX2-216ENST00000496675 PPP6R1Q9UPN7 881 aa29.39■■■□□ 2.3
PCNX2-216ENST00000496675 ABCA6Q8N139 1617 aa29.38■■■□□ 2.29
PCNX2-216ENST00000496675 PLA2R1Q13018 1463 aa29.36■■■□□ 2.29
PCNX2-216ENST00000496675 MLH3Q9UHC1 1453 aa29.36■■■□□ 2.29
PCNX2-216ENST00000496675 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
PCNX2-216ENST00000496675 ZMYM3Q14202 1370 aa29.33■■■□□ 2.29
PCNX2-216ENST00000496675 TCOF1Q13428 1488 aaKnown RBP29.31■■■□□ 2.28
PCNX2-216ENST00000496675 CSRNP3Q8WYN3 585 aa29.31■■■□□ 2.28
PCNX2-216ENST00000496675 CDK11AQ9UQ88 783 aaPredicted RBP29.3■■■□□ 2.28
PCNX2-216ENST00000496675 SUPT6HQ7KZ85 1726 aaKnown RBP29.29■■■□□ 2.28
PCNX2-216ENST00000496675 ATP1B4Q9UN42 357 aaPredicted RBP29.29■■■□□ 2.28
PCNX2-216ENST00000496675 MROH2AA6NES4 1674 aa29.28■■■□□ 2.28
PCNX2-216ENST00000496675 ZNF142P52746 1687 aaPredicted RBP29.24■■■□□ 2.27
PCNX2-216ENST00000496675 CPS1P31327 1500 aa29.23■■■□□ 2.27
PCNX2-216ENST00000496675 KIF14Q15058 1648 aa29.22■■■□□ 2.27
PCNX2-216ENST00000496675 MYO3AQ8NEV4 1616 aa29.22■■■□□ 2.27
PCNX2-216ENST00000496675 CEP170BQ9Y4F5 1589 aaPredicted RBP29.22■■■□□ 2.27
PCNX2-216ENST00000496675 PTPRKQ15262 1439 aa29.2■■■□□ 2.26
PCNX2-216ENST00000496675 SENP3Q9H4L4 574 aaPredicted RBP29.17■■■□□ 2.26
PCNX2-216ENST00000496675 SHANK2Q9UPX8 1470 aa29.16■■■□□ 2.26
PCNX2-216ENST00000496675 KIDINS220Q9ULH0 1771 aa29.14■■■□□ 2.26
PCNX2-216ENST00000496675 CLIP1P30622 1438 aa29.12■■■□□ 2.25
PCNX2-216ENST00000496675 TROQ12816 1431 aaPredicted RBP29.12■■■□□ 2.25
PCNX2-216ENST00000496675 RGS17Q9UGC6 210 aaPredicted RBP29.12■■■□□ 2.25
PCNX2-216ENST00000496675 CLTCQ00610 1675 aaKnown RBP29.11■■■□□ 2.25
PCNX2-216ENST00000496675 CDC42BPBQ9Y5S2 1711 aa29.1■■■□□ 2.25
PCNX2-216ENST00000496675 ABCC1P33527 1531 aa29.1■■■□□ 2.25
PCNX2-216ENST00000496675 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
PCNX2-216ENST00000496675 A2ML1A8K2U0 1454 aa29.04■■■□□ 2.24
PCNX2-216ENST00000496675 ALKQ9UM73 1620 aa29.03■■■□□ 2.24
PCNX2-216ENST00000496675 FMN1Q68DA7 1419 aa29.03■■■□□ 2.24
PCNX2-216ENST00000496675 DNMT1P26358 1616 aaKnown RBP29.02■■■□□ 2.24
PCNX2-216ENST00000496675 GGT6Q6P531 493 aa29.02■■■□□ 2.24
PCNX2-216ENST00000496675 POLR1AO95602 1720 aaPredicted RBP29■■■□□ 2.23
PCNX2-216ENST00000496675 PREX2Q70Z35 1606 aa28.98■■■□□ 2.23
PCNX2-216ENST00000496675 SPAG9O60271 1321 aaKnown RBP28.98■■■□□ 2.23
PCNX2-216ENST00000496675 NEURL4Q96JN8 1562 aa28.97■■■□□ 2.23
PCNX2-216ENST00000496675 ANKLE2Q86XL3 938 aa28.96■■■□□ 2.23
PCNX2-216ENST00000496675 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
PCNX2-216ENST00000496675 VWDEQ8N2E2 1590 aa28.94■■■□□ 2.22
PCNX2-216ENST00000496675 POTEAQ6S8J7 498 aa28.92■■■□□ 2.22
PCNX2-216ENST00000496675 ZNF777Q9ULD5 760 aaPredicted RBP28.91■■■□□ 2.22
PCNX2-216ENST00000496675 A2MP01023 1474 aa28.89■■■□□ 2.22
PCNX2-216ENST00000496675 EEA1Q15075 1411 aa28.87■■■□□ 2.21
PCNX2-216ENST00000496675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.86■■■□□ 2.21
PCNX2-216ENST00000496675 PLXNC1O60486 1568 aa28.85■■■□□ 2.21
PCNX2-216ENST00000496675 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.21
PCNX2-216ENST00000496675 NPHP4O75161 1426 aaPredicted RBP28.85■■■□□ 2.21
PCNX2-216ENST00000496675 THEMISQ8N1K5 641 aaPredicted RBP28.84■■■□□ 2.21
PCNX2-216ENST00000496675 TNRQ92752 1358 aa28.84■■■□□ 2.21
PCNX2-216ENST00000496675 ATP7AQ04656 1500 aa28.84■■■□□ 2.21
PCNX2-216ENST00000496675 LRRC7Q96NW7 1537 aa28.82■■■□□ 2.2
PCNX2-216ENST00000496675 RNF17Q9BXT8 1623 aaKnown RBP28.82■■■□□ 2.2
PCNX2-216ENST00000496675 SYCP2Q9BX26 1530 aa28.8■■■□□ 2.2
PCNX2-216ENST00000496675 FBXO31Q5XUX0 539 aaPredicted RBP28.8■■■□□ 2.2
PCNX2-216ENST00000496675 CDC42BPAQ5VT25 1732 aa28.8■■■□□ 2.2
PCNX2-216ENST00000496675 MED14O60244 1454 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms