RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
SH3D21-204ENST00000496636 SIGLEC1Q9BZZ2 1709 aa16.42■□□□□ 0.22
SH3D21-204ENST00000496636 MLECQ14165 292 aa16.41■□□□□ 0.22
SH3D21-204ENST00000496636 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
SH3D21-204ENST00000496636 ATP10AO60312 1499 aa16.4■□□□□ 0.22
SH3D21-204ENST00000496636 SCAPERQ9BY12 1400 aa16.39■□□□□ 0.21
SH3D21-204ENST00000496636 PLCH2O75038 1416 aa16.38■□□□□ 0.21
SH3D21-204ENST00000496636 UHRF1BP1Q6BDS2 1440 aa16.38■□□□□ 0.21
SH3D21-204ENST00000496636 EEA1Q15075 1411 aa16.36■□□□□ 0.21
SH3D21-204ENST00000496636 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
SH3D21-204ENST00000496636 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
SH3D21-204ENST00000496636 ZNF518AQ6AHZ1 1483 aa16.34■□□□□ 0.21
SH3D21-204ENST00000496636 PTPRTO14522 1441 aa16.33■□□□□ 0.2
SH3D21-204ENST00000496636 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
SH3D21-204ENST00000496636 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
SH3D21-204ENST00000496636 IQSEC2Q5JU85 1478 aa16.31■□□□□ 0.2
SH3D21-204ENST00000496636 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
SH3D21-204ENST00000496636 REREQ9P2R6 1566 aa16.3■□□□□ 0.2
SH3D21-204ENST00000496636 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
SH3D21-204ENST00000496636 KDM5CP41229 1560 aa16.29■□□□□ 0.2
SH3D21-204ENST00000496636 CEBPAP49715 358 aaPredicted RBP16.28■□□□□ 0.2
SH3D21-204ENST00000496636 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
SH3D21-204ENST00000496636 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
SH3D21-204ENST00000496636 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
SH3D21-204ENST00000496636 KIF14Q15058 1648 aa16.25■□□□□ 0.19
SH3D21-204ENST00000496636 FMN1Q68DA7 1419 aa16.25■□□□□ 0.19
SH3D21-204ENST00000496636 DIP2CQ9Y2E4 1556 aa16.25■□□□□ 0.19
SH3D21-204ENST00000496636 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
SH3D21-204ENST00000496636 AGLP35573 1532 aa16.23■□□□□ 0.19
SH3D21-204ENST00000496636 LTBP4Q8N2S1 1624 aa16.23■□□□□ 0.19
SH3D21-204ENST00000496636 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
SH3D21-204ENST00000496636 CLIP1P30622 1438 aa16.22■□□□□ 0.19
SH3D21-204ENST00000496636 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
SH3D21-204ENST00000496636 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
SH3D21-204ENST00000496636 ESF1Q9H501 851 aaKnown RBP16.22■□□□□ 0.19
SH3D21-204ENST00000496636 TROQ12816 1431 aaPredicted RBP16.21■□□□□ 0.19
SH3D21-204ENST00000496636 NCOA1Q15788 1441 aa16.21■□□□□ 0.19
SH3D21-204ENST00000496636 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
SH3D21-204ENST00000496636 C3P01024 1663 aa16.2■□□□□ 0.18
SH3D21-204ENST00000496636 MYT1LQ9UL68 1186 aa16.19■□□□□ 0.18
SH3D21-204ENST00000496636 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
SH3D21-204ENST00000496636 NPATQ14207 1427 aa16.17■□□□□ 0.18
SH3D21-204ENST00000496636 ABCC1P33527 1531 aa16.15■□□□□ 0.18
SH3D21-204ENST00000496636 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
SH3D21-204ENST00000496636 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
SH3D21-204ENST00000496636 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
SH3D21-204ENST00000496636 PREX2Q70Z35 1606 aa16.11■□□□□ 0.17
SH3D21-204ENST00000496636 MROH2AA6NES4 1674 aa16.1■□□□□ 0.17
SH3D21-204ENST00000496636 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
SH3D21-204ENST00000496636 ITSN2Q9NZM3 1697 aa16.08■□□□□ 0.17
SH3D21-204ENST00000496636 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
SH3D21-204ENST00000496636 CCDC18Q5T9S5 1454 aa16.07■□□□□ 0.16
SH3D21-204ENST00000496636 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
SH3D21-204ENST00000496636 KIDINS220Q9ULH0 1771 aa16.06■□□□□ 0.16
SH3D21-204ENST00000496636 PKD2Q13563 968 aa16.06■□□□□ 0.16
SH3D21-204ENST00000496636 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
SH3D21-204ENST00000496636 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
SH3D21-204ENST00000496636 ZNF142P52746 1687 aaPredicted RBP16.05■□□□□ 0.16
SH3D21-204ENST00000496636 TCOF1Q13428 1488 aaKnown RBP16.04■□□□□ 0.16
SH3D21-204ENST00000496636 ZMYM3Q14202 1370 aa16.04■□□□□ 0.16
SH3D21-204ENST00000496636 MYO3AQ8NEV4 1616 aa16.02■□□□□ 0.16
SH3D21-204ENST00000496636 SAMD9LQ8IVG5 1584 aa16.02■□□□□ 0.16
SH3D21-204ENST00000496636 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.16
SH3D21-204ENST00000496636 NCKAP5LQ9HCH0 1330 aa16.01■□□□□ 0.15
SH3D21-204ENST00000496636 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
SH3D21-204ENST00000496636 PLXNC1O60486 1568 aa16■□□□□ 0.15
SH3D21-204ENST00000496636 SPAG9O60271 1321 aaKnown RBP15.99■□□□□ 0.15
SH3D21-204ENST00000496636 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
SH3D21-204ENST00000496636 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
SH3D21-204ENST00000496636 LRRIQ1Q96JM4 1722 aa15.98■□□□□ 0.15
SH3D21-204ENST00000496636 ATP7AQ04656 1500 aa15.98■□□□□ 0.15
SH3D21-204ENST00000496636 SYCP2Q9BX26 1530 aa15.98■□□□□ 0.15
SH3D21-204ENST00000496636 PLEKHH2Q8IVE3 1493 aa15.97■□□□□ 0.15
SH3D21-204ENST00000496636 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
SH3D21-204ENST00000496636 MED1Q15648 1581 aaPredicted RBP15.96■□□□□ 0.15
SH3D21-204ENST00000496636 KIAA1107Q9UPP5 1409 aa15.96■□□□□ 0.15
SH3D21-204ENST00000496636 A2MP01023 1474 aa15.96■□□□□ 0.14
SH3D21-204ENST00000496636 CPS1P31327 1500 aa15.95■□□□□ 0.14
SH3D21-204ENST00000496636 INO80Q9ULG1 1556 aaPredicted RBP15.95■□□□□ 0.14
SH3D21-204ENST00000496636 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
SH3D21-204ENST00000496636 A2ML1A8K2U0 1454 aa15.94■□□□□ 0.14
SH3D21-204ENST00000496636 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
SH3D21-204ENST00000496636 SUPT6HQ7KZ85 1726 aaKnown RBP15.92■□□□□ 0.14
SH3D21-204ENST00000496636 TOM1O60784 492 aa15.92■□□□□ 0.14
SH3D21-204ENST00000496636 ZNF777Q9ULD5 760 aaPredicted RBP15.92■□□□□ 0.14
SH3D21-204ENST00000496636 GPATCH8Q9UKJ3 1502 aaKnown RBP15.92■□□□□ 0.14
SH3D21-204ENST00000496636 HSPA1LP34931 641 aa15.91■□□□□ 0.14
SH3D21-204ENST00000496636 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
SH3D21-204ENST00000496636 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
SH3D21-204ENST00000496636 FAM135AQ9P2D6 1515 aa15.89■□□□□ 0.13
SH3D21-204ENST00000496636 GGT6Q6P531 493 aa15.88■□□□□ 0.13
SH3D21-204ENST00000496636 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
SH3D21-204ENST00000496636 DNMT1P26358 1616 aaKnown RBP15.87■□□□□ 0.13
SH3D21-204ENST00000496636 HNRNPMP52272 730 aaKnown RBP eCLIP15.87■□□□□ 0.13
SH3D21-204ENST00000496636 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
SH3D21-204ENST00000496636 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
SH3D21-204ENST00000496636 PIP4K2BP78356 416 aa15.86■□□□□ 0.13
SH3D21-204ENST00000496636 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
SH3D21-204ENST00000496636 NEURL4Q96JN8 1562 aa15.85■□□□□ 0.13
SH3D21-204ENST00000496636 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms