RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 ARHGEF12Q9NZN5 1544 aa18.92■□□□□ 0.62
LRP8-211ENST00000496580 PREX1Q8TCU6 1659 aa18.92■□□□□ 0.62
LRP8-211ENST00000496580 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
LRP8-211ENST00000496580 ILDR2Q71H61 639 aa18.89■□□□□ 0.61
LRP8-211ENST00000496580 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
LRP8-211ENST00000496580 PLCH2O75038 1416 aa18.87■□□□□ 0.61
LRP8-211ENST00000496580 CEBPAP49715 358 aaPredicted RBP18.87■□□□□ 0.61
LRP8-211ENST00000496580 ATP10AO60312 1499 aa18.86■□□□□ 0.61
LRP8-211ENST00000496580 C9orf84Q5VXU9 1444 aa18.86■□□□□ 0.61
LRP8-211ENST00000496580 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
LRP8-211ENST00000496580 MYO5CQ9NQX4 1742 aa18.83■□□□□ 0.6
LRP8-211ENST00000496580 KIF14Q15058 1648 aa18.81■□□□□ 0.6
LRP8-211ENST00000496580 EEA1Q15075 1411 aa18.79■□□□□ 0.6
LRP8-211ENST00000496580 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
LRP8-211ENST00000496580 KDM5CP41229 1560 aa18.76■□□□□ 0.59
LRP8-211ENST00000496580 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
LRP8-211ENST00000496580 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
LRP8-211ENST00000496580 SOCS7O14512 581 aa18.76■□□□□ 0.59
LRP8-211ENST00000496580 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
LRP8-211ENST00000496580 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
LRP8-211ENST00000496580 C3P01024 1663 aa18.75■□□□□ 0.59
LRP8-211ENST00000496580 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
LRP8-211ENST00000496580 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
LRP8-211ENST00000496580 AFAP1Q8N556 730 aa18.73■□□□□ 0.59
LRP8-211ENST00000496580 ATP1B4Q9UN42 357 aaPredicted RBP18.73■□□□□ 0.59
LRP8-211ENST00000496580 DMRT2Q9Y5R5 561 aa18.72■□□□□ 0.59
LRP8-211ENST00000496580 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
LRP8-211ENST00000496580 PTPRTO14522 1441 aa18.7■□□□□ 0.58
LRP8-211ENST00000496580 LTBP4Q8N2S1 1624 aa18.7■□□□□ 0.58
LRP8-211ENST00000496580 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
LRP8-211ENST00000496580 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
LRP8-211ENST00000496580 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
LRP8-211ENST00000496580 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
LRP8-211ENST00000496580 MYT1LQ9UL68 1186 aa18.68■□□□□ 0.58
LRP8-211ENST00000496580 ARHGAP35Q9NRY4 1499 aa18.68■□□□□ 0.58
LRP8-211ENST00000496580 CDC42BPBQ9Y5S2 1711 aa18.68■□□□□ 0.58
LRP8-211ENST00000496580 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
LRP8-211ENST00000496580 MLH3Q9UHC1 1453 aa18.65■□□□□ 0.58
LRP8-211ENST00000496580 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
LRP8-211ENST00000496580 ABCC1P33527 1531 aa18.64■□□□□ 0.57
LRP8-211ENST00000496580 AGLP35573 1532 aa18.64■□□□□ 0.57
LRP8-211ENST00000496580 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
LRP8-211ENST00000496580 NCOA1Q15788 1441 aa18.63■□□□□ 0.57
LRP8-211ENST00000496580 CDK11AQ9UQ88 783 aaPredicted RBP18.62■□□□□ 0.57
LRP8-211ENST00000496580 PREX2Q70Z35 1606 aa18.62■□□□□ 0.57
LRP8-211ENST00000496580 KIDINS220Q9ULH0 1771 aa18.61■□□□□ 0.57
LRP8-211ENST00000496580 CLIP1P30622 1438 aa18.61■□□□□ 0.57
LRP8-211ENST00000496580 IQSEC2Q5JU85 1478 aa18.59■□□□□ 0.57
LRP8-211ENST00000496580 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
LRP8-211ENST00000496580 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
LRP8-211ENST00000496580 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
LRP8-211ENST00000496580 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
LRP8-211ENST00000496580 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
LRP8-211ENST00000496580 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
LRP8-211ENST00000496580 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
LRP8-211ENST00000496580 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
LRP8-211ENST00000496580 NCKAP5LQ9HCH0 1330 aa18.51■□□□□ 0.55
LRP8-211ENST00000496580 NPATQ14207 1427 aa18.5■□□□□ 0.55
LRP8-211ENST00000496580 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
LRP8-211ENST00000496580 SUPT6HQ7KZ85 1726 aaKnown RBP18.5■□□□□ 0.55
LRP8-211ENST00000496580 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
LRP8-211ENST00000496580 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
LRP8-211ENST00000496580 SYCP2Q9BX26 1530 aa18.49■□□□□ 0.55
LRP8-211ENST00000496580 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
LRP8-211ENST00000496580 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
LRP8-211ENST00000496580 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.55
LRP8-211ENST00000496580 CEP170BQ9Y4F5 1589 aaPredicted RBP18.45■□□□□ 0.54
LRP8-211ENST00000496580 CASKIN1Q8WXD9 1431 aa18.44■□□□□ 0.54
LRP8-211ENST00000496580 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
LRP8-211ENST00000496580 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
LRP8-211ENST00000496580 TCOF1Q13428 1488 aaKnown RBP18.44■□□□□ 0.54
LRP8-211ENST00000496580 PLXNC1O60486 1568 aa18.43■□□□□ 0.54
LRP8-211ENST00000496580 ATP7AQ04656 1500 aa18.43■□□□□ 0.54
LRP8-211ENST00000496580 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
LRP8-211ENST00000496580 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
LRP8-211ENST00000496580 PTPRKQ15262 1439 aa18.41■□□□□ 0.54
LRP8-211ENST00000496580 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
LRP8-211ENST00000496580 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.54
LRP8-211ENST00000496580 PKD2Q13563 968 aa18.39■□□□□ 0.53
LRP8-211ENST00000496580 A2MP01023 1474 aa18.39■□□□□ 0.53
LRP8-211ENST00000496580 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
LRP8-211ENST00000496580 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
LRP8-211ENST00000496580 GGT6Q6P531 493 aa18.35■□□□□ 0.53
LRP8-211ENST00000496580 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
LRP8-211ENST00000496580 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
LRP8-211ENST00000496580 HSPA1LP34931 641 aa18.33■□□□□ 0.52
LRP8-211ENST00000496580 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
LRP8-211ENST00000496580 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
LRP8-211ENST00000496580 NEURL4Q96JN8 1562 aa18.32■□□□□ 0.52
LRP8-211ENST00000496580 A2ML1A8K2U0 1454 aa18.32■□□□□ 0.52
LRP8-211ENST00000496580 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
LRP8-211ENST00000496580 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
LRP8-211ENST00000496580 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
LRP8-211ENST00000496580 PLEKHH2Q8IVE3 1493 aa18.3■□□□□ 0.52
LRP8-211ENST00000496580 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
LRP8-211ENST00000496580 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.51
LRP8-211ENST00000496580 CPS1P31327 1500 aa18.26■□□□□ 0.51
LRP8-211ENST00000496580 ALKQ9UM73 1620 aa18.25■□□□□ 0.51
LRP8-211ENST00000496580 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
LRP8-211ENST00000496580 SHANK2Q9UPX8 1470 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms