RNA–Protein interactions for RNA: ENST00000496528.5

TMCO4-208, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 5

Gene TMCO4, Length 804 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-208ENST00000496528 HSPA1LP34931 641 aa23.28■■□□□ 1.32
TMCO4-208ENST00000496528 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
TMCO4-208ENST00000496528 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
TMCO4-208ENST00000496528 NCOA1Q15788 1441 aa23.25■■□□□ 1.31
TMCO4-208ENST00000496528 ZNF335Q9H4Z2 1342 aaPredicted RBP23.23■■□□□ 1.31
TMCO4-208ENST00000496528 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
TMCO4-208ENST00000496528 ATP10AO60312 1499 aa23.21■■□□□ 1.31
TMCO4-208ENST00000496528 CFAP74Q9C0B2 1584 aa23.2■■□□□ 1.3
TMCO4-208ENST00000496528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
TMCO4-208ENST00000496528 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
TMCO4-208ENST00000496528 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
TMCO4-208ENST00000496528 C9orf84Q5VXU9 1444 aa23.17■■□□□ 1.3
TMCO4-208ENST00000496528 C3P01024 1663 aa23.14■■□□□ 1.29
TMCO4-208ENST00000496528 P3H3Q8IVL6 736 aa23.14■■□□□ 1.29
TMCO4-208ENST00000496528 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
TMCO4-208ENST00000496528 TRAPPC8Q9Y2L5 1435 aa23.11■■□□□ 1.29
TMCO4-208ENST00000496528 PIP4K2BP78356 416 aa23.11■■□□□ 1.29
TMCO4-208ENST00000496528 NCKAP5LQ9HCH0 1330 aa23.09■■□□□ 1.29
TMCO4-208ENST00000496528 CAMSAP1Q5T5Y3 1602 aa23.09■■□□□ 1.29
TMCO4-208ENST00000496528 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.29
TMCO4-208ENST00000496528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.29
TMCO4-208ENST00000496528 RAPGEF6Q8TEU7 1601 aa23.08■■□□□ 1.29
TMCO4-208ENST00000496528 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
TMCO4-208ENST00000496528 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
TMCO4-208ENST00000496528 TOM1O60784 492 aa23.01■■□□□ 1.27
TMCO4-208ENST00000496528 RGS17Q9UGC6 210 aaPredicted RBP23■■□□□ 1.27
TMCO4-208ENST00000496528 PKD2Q13563 968 aa22.95■■□□□ 1.26
TMCO4-208ENST00000496528 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
TMCO4-208ENST00000496528 PLCH2O75038 1416 aa22.92■■□□□ 1.26
TMCO4-208ENST00000496528 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
TMCO4-208ENST00000496528 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
TMCO4-208ENST00000496528 TCOF1Q13428 1488 aaKnown RBP22.89■■□□□ 1.25
TMCO4-208ENST00000496528 REREQ9P2R6 1566 aa22.89■■□□□ 1.25
TMCO4-208ENST00000496528 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
TMCO4-208ENST00000496528 NPATQ14207 1427 aa22.88■■□□□ 1.25
TMCO4-208ENST00000496528 DIP2CQ9Y2E4 1556 aa22.88■■□□□ 1.25
TMCO4-208ENST00000496528 AGLP35573 1532 aa22.87■■□□□ 1.25
TMCO4-208ENST00000496528 AFAP1Q8N556 730 aa22.86■■□□□ 1.25
TMCO4-208ENST00000496528 ALKQ9UM73 1620 aa22.85■■□□□ 1.25
TMCO4-208ENST00000496528 ZNF518AQ6AHZ1 1483 aa22.85■■□□□ 1.25
TMCO4-208ENST00000496528 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
TMCO4-208ENST00000496528 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
TMCO4-208ENST00000496528 KDM5CP41229 1560 aa22.84■■□□□ 1.25
TMCO4-208ENST00000496528 EFCAB2Q5VUJ9 269 aa22.83■■□□□ 1.25
TMCO4-208ENST00000496528 CPS1P31327 1500 aa22.82■■□□□ 1.24
TMCO4-208ENST00000496528 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
TMCO4-208ENST00000496528 SUPT6HQ7KZ85 1726 aaKnown RBP22.8■■□□□ 1.24
TMCO4-208ENST00000496528 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
TMCO4-208ENST00000496528 ZNF142P52746 1687 aaPredicted RBP22.79■■□□□ 1.24
TMCO4-208ENST00000496528 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
TMCO4-208ENST00000496528 PTPRKQ15262 1439 aa22.79■■□□□ 1.24
TMCO4-208ENST00000496528 POTEAQ6S8J7 498 aa22.78■■□□□ 1.24
TMCO4-208ENST00000496528 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
TMCO4-208ENST00000496528 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
TMCO4-208ENST00000496528 MROH2AA6NES4 1674 aa22.76■■□□□ 1.23
TMCO4-208ENST00000496528 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
TMCO4-208ENST00000496528 CEP170BQ9Y4F5 1589 aaPredicted RBP22.74■■□□□ 1.23
TMCO4-208ENST00000496528 MLH3Q9UHC1 1453 aa22.73■■□□□ 1.23
TMCO4-208ENST00000496528 MYO5CQ9NQX4 1742 aa22.72■■□□□ 1.23
TMCO4-208ENST00000496528 SETD1AO15047 1707 aaKnown RBP22.66■■□□□ 1.22
TMCO4-208ENST00000496528 CDK13Q14004 1512 aaKnown RBP22.66■■□□□ 1.22
TMCO4-208ENST00000496528 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
TMCO4-208ENST00000496528 NEURL4Q96JN8 1562 aa22.63■■□□□ 1.21
TMCO4-208ENST00000496528 SRCAPQ6ZRS2 3230 aa22.61■■□□□ 1.21
TMCO4-208ENST00000496528 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
TMCO4-208ENST00000496528 DNMT1P26358 1616 aaKnown RBP22.6■■□□□ 1.21
TMCO4-208ENST00000496528 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
TMCO4-208ENST00000496528 CLTCQ00610 1675 aaKnown RBP22.59■■□□□ 1.21
TMCO4-208ENST00000496528 KIDINS220Q9ULH0 1771 aa22.59■■□□□ 1.21
TMCO4-208ENST00000496528 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
TMCO4-208ENST00000496528 A2ML1A8K2U0 1454 aa22.57■■□□□ 1.2
TMCO4-208ENST00000496528 UPF1Q92900 1129 aaKnown RBP eCLIP22.56■■□□□ 1.2
TMCO4-208ENST00000496528 KIF14Q15058 1648 aa22.55■■□□□ 1.2
TMCO4-208ENST00000496528 LRRC7Q96NW7 1537 aa22.51■■□□□ 1.19
TMCO4-208ENST00000496528 RNF17Q9BXT8 1623 aaKnown RBP22.5■■□□□ 1.19
TMCO4-208ENST00000496528 STRCP1A6NGW2 1772 aa22.49■■□□□ 1.19
TMCO4-208ENST00000496528 CDC42BPBQ9Y5S2 1711 aa22.48■■□□□ 1.19
TMCO4-208ENST00000496528 ABCC1P33527 1531 aa22.47■■□□□ 1.19
TMCO4-208ENST00000496528 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
TMCO4-208ENST00000496528 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
TMCO4-208ENST00000496528 MED14O60244 1454 aa22.42■■□□□ 1.18
TMCO4-208ENST00000496528 NPHP4O75161 1426 aaPredicted RBP22.42■■□□□ 1.18
TMCO4-208ENST00000496528 CDK11AQ9UQ88 783 aaPredicted RBP22.42■■□□□ 1.18
TMCO4-208ENST00000496528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.4■■□□□ 1.18
TMCO4-208ENST00000496528 GGT6Q6P531 493 aa22.4■■□□□ 1.18
TMCO4-208ENST00000496528 TROQ12816 1431 aaPredicted RBP22.39■■□□□ 1.17
TMCO4-208ENST00000496528 SYNMO15061 1565 aa22.38■■□□□ 1.17
TMCO4-208ENST00000496528 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
TMCO4-208ENST00000496528 DEPDC5O75140 1603 aa22.36■■□□□ 1.17
TMCO4-208ENST00000496528 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
TMCO4-208ENST00000496528 PLXNC1O60486 1568 aa22.35■■□□□ 1.17
TMCO4-208ENST00000496528 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
TMCO4-208ENST00000496528 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
TMCO4-208ENST00000496528 PREX2Q70Z35 1606 aa22.34■■□□□ 1.17
TMCO4-208ENST00000496528 FBXO31Q5XUX0 539 aaPredicted RBP22.33■■□□□ 1.17
TMCO4-208ENST00000496528 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
TMCO4-208ENST00000496528 TNRQ92752 1358 aa22.33■■□□□ 1.17
TMCO4-208ENST00000496528 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
TMCO4-208ENST00000496528 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
TMCO4-208ENST00000496528 CLIP1P30622 1438 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms