RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 ABCC5O15440 1437 aa21.24■□□□□ 0.99
UBXN11-216ENST00000496466 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
UBXN11-216ENST00000496466 KIF14Q15058 1648 aa21.23■□□□□ 0.99
UBXN11-216ENST00000496466 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
UBXN11-216ENST00000496466 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
UBXN11-216ENST00000496466 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
UBXN11-216ENST00000496466 CHD1O14646 1710 aa21.21■□□□□ 0.99
UBXN11-216ENST00000496466 CFDP1Q9UEE9 299 aaPredicted RBP21.21■□□□□ 0.99
UBXN11-216ENST00000496466 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
UBXN11-216ENST00000496466 ATP10BO94823 1461 aa21.2■□□□□ 0.98
UBXN11-216ENST00000496466 ADCY10Q96PN6 1610 aa21.19■□□□□ 0.98
UBXN11-216ENST00000496466 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
UBXN11-216ENST00000496466 ROCK1Q13464 1354 aa21.18■□□□□ 0.98
UBXN11-216ENST00000496466 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
UBXN11-216ENST00000496466 CAMSAP2Q08AD1 1489 aa21.17■□□□□ 0.98
UBXN11-216ENST00000496466 PLEKHD1A6NEE1 506 aa21.17■□□□□ 0.98
UBXN11-216ENST00000496466 PTPRGP23470 1445 aa21.17■□□□□ 0.98
UBXN11-216ENST00000496466 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
UBXN11-216ENST00000496466 ITSN2Q9NZM3 1697 aa21.16■□□□□ 0.98
UBXN11-216ENST00000496466 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.97
UBXN11-216ENST00000496466 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
UBXN11-216ENST00000496466 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
UBXN11-216ENST00000496466 FOXD1Q16676 465 aa21.09■□□□□ 0.97
UBXN11-216ENST00000496466 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
UBXN11-216ENST00000496466 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
UBXN11-216ENST00000496466 ANP32CO43423 234 aa21.06■□□□□ 0.96
UBXN11-216ENST00000496466 CDC42BPAQ5VT25 1732 aa21.06■□□□□ 0.96
UBXN11-216ENST00000496466 NCOA1Q15788 1441 aa21.05■□□□□ 0.96
UBXN11-216ENST00000496466 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
UBXN11-216ENST00000496466 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
UBXN11-216ENST00000496466 ADGBQ8N7X0 1667 aa21.02■□□□□ 0.96
UBXN11-216ENST00000496466 ADGRL2O95490 1459 aa21.01■□□□□ 0.95
UBXN11-216ENST00000496466 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
UBXN11-216ENST00000496466 ANKRD30BQ9BXX2 1392 aa20.99■□□□□ 0.95
UBXN11-216ENST00000496466 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
UBXN11-216ENST00000496466 HSPA5P11021 654 aaKnown RBP20.96■□□□□ 0.95
UBXN11-216ENST00000496466 L3MBTL2Q969R5 705 aa20.95■□□□□ 0.94
UBXN11-216ENST00000496466 PZPP20742 1482 aa20.95■□□□□ 0.94
UBXN11-216ENST00000496466 HNRNPMP52272 730 aaKnown RBP eCLIP20.94■□□□□ 0.94
UBXN11-216ENST00000496466 C9orf84Q5VXU9 1444 aa20.94■□□□□ 0.94
UBXN11-216ENST00000496466 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
UBXN11-216ENST00000496466 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
UBXN11-216ENST00000496466 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
UBXN11-216ENST00000496466 ANKRD50Q9ULJ7 1429 aa20.92■□□□□ 0.94
UBXN11-216ENST00000496466 ABCC2Q92887 1545 aa20.92■□□□□ 0.94
UBXN11-216ENST00000496466 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
UBXN11-216ENST00000496466 EIF4G2P78344 907 aaKnown RBP eCLIP20.91■□□□□ 0.94
UBXN11-216ENST00000496466 TSPY4P0CV99 314 aa20.9■□□□□ 0.94
UBXN11-216ENST00000496466 TSPY10P0CW01 314 aa20.9■□□□□ 0.94
UBXN11-216ENST00000496466 CDC42BPBQ9Y5S2 1711 aa20.89■□□□□ 0.94
UBXN11-216ENST00000496466 MBD5Q9P267 1494 aa20.89■□□□□ 0.93
UBXN11-216ENST00000496466 PREX2Q70Z35 1606 aa20.89■□□□□ 0.93
UBXN11-216ENST00000496466 SAMD9LQ8IVG5 1584 aa20.88■□□□□ 0.93
UBXN11-216ENST00000496466 TEX14Q8IWB6 1497 aa20.87■□□□□ 0.93
UBXN11-216ENST00000496466 ARHGEF5Q12774 1597 aa20.87■□□□□ 0.93
UBXN11-216ENST00000496466 TTC37Q6PGP7 1564 aa20.86■□□□□ 0.93
UBXN11-216ENST00000496466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.86■□□□□ 0.93
UBXN11-216ENST00000496466 PKD2Q13563 968 aa20.84■□□□□ 0.93
UBXN11-216ENST00000496466 NBPF8Q3BBV2 869 aa20.84■□□□□ 0.93
UBXN11-216ENST00000496466 KIAA1107Q9UPP5 1409 aa20.84■□□□□ 0.93
UBXN11-216ENST00000496466 KIF15Q9NS87 1388 aa20.83■□□□□ 0.92
UBXN11-216ENST00000496466 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
UBXN11-216ENST00000496466 ARHGAP5Q13017 1502 aa20.82■□□□□ 0.92
UBXN11-216ENST00000496466 NUP155O75694 1391 aa20.81■□□□□ 0.92
UBXN11-216ENST00000496466 CNTLNQ9NXG0 1405 aa20.79■□□□□ 0.92
UBXN11-216ENST00000496466 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
UBXN11-216ENST00000496466 C11orf95C9JLR9 678 aaPredicted RBP20.78■□□□□ 0.92
UBXN11-216ENST00000496466 FKBP8Q14318 412 aa20.78■□□□□ 0.92
UBXN11-216ENST00000496466 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
UBXN11-216ENST00000496466 ZCCHC11Q5TAX3 1644 aaKnown RBP20.78■□□□□ 0.92
UBXN11-216ENST00000496466 CCDC7Q96M83 1385 aa20.78■□□□□ 0.92
UBXN11-216ENST00000496466 UHRF1BP1LA0JNW5 1464 aa20.78■□□□□ 0.92
UBXN11-216ENST00000496466 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
UBXN11-216ENST00000496466 SPATA31E1Q6ZUB1 1445 aa20.75■□□□□ 0.91
UBXN11-216ENST00000496466 KDM5DQ9BY66 1539 aa20.74■□□□□ 0.91
UBXN11-216ENST00000496466 BCANQ96GW7 911 aa20.72■□□□□ 0.91
UBXN11-216ENST00000496466 NEFLP07196 543 aa20.7■□□□□ 0.9
UBXN11-216ENST00000496466 PLCH2O75038 1416 aa20.7■□□□□ 0.9
UBXN11-216ENST00000496466 ARHGEF12Q9NZN5 1544 aa20.7■□□□□ 0.9
UBXN11-216ENST00000496466 POLR1AO95602 1720 aaPredicted RBP20.69■□□□□ 0.9
UBXN11-216ENST00000496466 MAST1Q9Y2H9 1570 aa20.69■□□□□ 0.9
UBXN11-216ENST00000496466 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
UBXN11-216ENST00000496466 HNRNPUQ00839 825 aaKnown RBP eCLIP20.68■□□□□ 0.9
UBXN11-216ENST00000496466 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
UBXN11-216ENST00000496466 KIF7Q2M1P5 1343 aa20.67■□□□□ 0.9
UBXN11-216ENST00000496466 EFCAB2Q5VUJ9 269 aa20.66■□□□□ 0.9
UBXN11-216ENST00000496466 PRKRIP1Q9H875 184 aaPredicted RBP20.66■□□□□ 0.9
UBXN11-216ENST00000496466 ZNF326Q5BKZ1 582 aaKnown RBP20.65■□□□□ 0.9
UBXN11-216ENST00000496466 FAM135AQ9P2D6 1515 aa20.65■□□□□ 0.9
UBXN11-216ENST00000496466 CCDC184Q52MB2 194 aa20.64■□□□□ 0.89
UBXN11-216ENST00000496466 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
UBXN11-216ENST00000496466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.894e-6■■■■□ 19.8
UBXN11-216ENST00000496466 ABCC1P33527 1531 aa20.6■□□□□ 0.89
UBXN11-216ENST00000496466 TRAPPC8Q9Y2L5 1435 aa20.59■□□□□ 0.89
UBXN11-216ENST00000496466 UNC13BO14795 1591 aa20.59■□□□□ 0.89
UBXN11-216ENST00000496466 USP47Q96K76 1375 aa20.58■□□□□ 0.88
UBXN11-216ENST00000496466 UHRF1BP1Q6BDS2 1440 aa20.57■□□□□ 0.88
UBXN11-216ENST00000496466 WDR7Q9Y4E6 1490 aa20.57■□□□□ 0.88
UBXN11-216ENST00000496466 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
UBXN11-216ENST00000496466 BCORL1Q5H9F3 1711 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms