RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
UBP1-213ENST00000496310 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
UBP1-213ENST00000496310 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
UBP1-213ENST00000496310 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
UBP1-213ENST00000496310 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
UBP1-213ENST00000496310 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
UBP1-213ENST00000496310 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
UBP1-213ENST00000496310 SOCS7O14512 581 aa12.1□□□□□ -0.47
UBP1-213ENST00000496310 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
UBP1-213ENST00000496310 EHMT2Q96KQ7 1210 aa12.1□□□□□ -0.47
UBP1-213ENST00000496310 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
UBP1-213ENST00000496310 MYO5CQ9NQX4 1742 aa12.07□□□□□ -0.48
UBP1-213ENST00000496310 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
UBP1-213ENST00000496310 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
UBP1-213ENST00000496310 SPATA31D1Q6ZQQ2 1576 aa12.06□□□□□ -0.48
UBP1-213ENST00000496310 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
UBP1-213ENST00000496310 ATP10AO60312 1499 aa12.05□□□□□ -0.48
UBP1-213ENST00000496310 C3P01024 1663 aa12.05□□□□□ -0.48
UBP1-213ENST00000496310 KIF14Q15058 1648 aa12.04□□□□□ -0.48
UBP1-213ENST00000496310 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
UBP1-213ENST00000496310 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
UBP1-213ENST00000496310 PLCH2O75038 1416 aa12.03□□□□□ -0.48
UBP1-213ENST00000496310 AFAP1Q8N556 730 aa12.02□□□□□ -0.49
UBP1-213ENST00000496310 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
UBP1-213ENST00000496310 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
UBP1-213ENST00000496310 CDC42BPBQ9Y5S2 1711 aa12□□□□□ -0.49
UBP1-213ENST00000496310 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
UBP1-213ENST00000496310 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
UBP1-213ENST00000496310 LTBP4Q8N2S1 1624 aa11.98□□□□□ -0.49
UBP1-213ENST00000496310 DIP2CQ9Y2E4 1556 aa11.98□□□□□ -0.49
UBP1-213ENST00000496310 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
UBP1-213ENST00000496310 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
UBP1-213ENST00000496310 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
UBP1-213ENST00000496310 KDM5CP41229 1560 aa11.94□□□□□ -0.5
UBP1-213ENST00000496310 PTPRTO14522 1441 aa11.94□□□□□ -0.5
UBP1-213ENST00000496310 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
UBP1-213ENST00000496310 ZNF518AQ6AHZ1 1483 aa11.93□□□□□ -0.5
UBP1-213ENST00000496310 ITSN2Q9NZM3 1697 aa11.93□□□□□ -0.5
UBP1-213ENST00000496310 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
UBP1-213ENST00000496310 ESF1Q9H501 851 aaKnown RBP11.92□□□□□ -0.5
UBP1-213ENST00000496310 CAMSAP1Q5T5Y3 1602 aa11.92□□□□□ -0.5
UBP1-213ENST00000496310 TRAPPC8Q9Y2L5 1435 aa11.92□□□□□ -0.5
UBP1-213ENST00000496310 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
UBP1-213ENST00000496310 ZNF335Q9H4Z2 1342 aaPredicted RBP11.9□□□□□ -0.5
UBP1-213ENST00000496310 NCOA1Q15788 1441 aa11.9□□□□□ -0.5
UBP1-213ENST00000496310 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
UBP1-213ENST00000496310 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
UBP1-213ENST00000496310 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
UBP1-213ENST00000496310 UBAP1LF5GYI3 381 aa11.89□□□□□ -0.51
UBP1-213ENST00000496310 CLTCQ00610 1675 aaKnown RBP11.89□□□□□ -0.51
UBP1-213ENST00000496310 REREQ9P2R6 1566 aa11.88□□□□□ -0.51
UBP1-213ENST00000496310 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
UBP1-213ENST00000496310 EEA1Q15075 1411 aa11.87□□□□□ -0.51
UBP1-213ENST00000496310 ABCC1P33527 1531 aa11.87□□□□□ -0.51
UBP1-213ENST00000496310 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
UBP1-213ENST00000496310 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
UBP1-213ENST00000496310 MLH3Q9UHC1 1453 aa11.86□□□□□ -0.51
UBP1-213ENST00000496310 AGLP35573 1532 aa11.86□□□□□ -0.51
UBP1-213ENST00000496310 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
UBP1-213ENST00000496310 CLIP1P30622 1438 aa11.85□□□□□ -0.51
UBP1-213ENST00000496310 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
UBP1-213ENST00000496310 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
UBP1-213ENST00000496310 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.52
UBP1-213ENST00000496310 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
UBP1-213ENST00000496310 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
UBP1-213ENST00000496310 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
UBP1-213ENST00000496310 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
UBP1-213ENST00000496310 HSPA1LP34931 641 aa11.81□□□□□ -0.52
UBP1-213ENST00000496310 HNRNPMP52272 730 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■■□ 26.3
UBP1-213ENST00000496310 ZNF142P52746 1687 aaPredicted RBP11.81□□□□□ -0.52
UBP1-213ENST00000496310 CNTLNQ9NXG0 1405 aa11.8□□□□□ -0.52
UBP1-213ENST00000496310 SYCP2Q9BX26 1530 aa11.8□□□□□ -0.52
UBP1-213ENST00000496310 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
UBP1-213ENST00000496310 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
UBP1-213ENST00000496310 GGT6Q6P531 493 aa11.79□□□□□ -0.52
UBP1-213ENST00000496310 NPATQ14207 1427 aa11.77□□□□□ -0.52
UBP1-213ENST00000496310 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
UBP1-213ENST00000496310 POLR1AO95602 1720 aaPredicted RBP11.77□□□□□ -0.53
UBP1-213ENST00000496310 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
UBP1-213ENST00000496310 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
UBP1-213ENST00000496310 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
UBP1-213ENST00000496310 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
UBP1-213ENST00000496310 PKD2Q13563 968 aa11.75□□□□□ -0.53
UBP1-213ENST00000496310 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
UBP1-213ENST00000496310 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
UBP1-213ENST00000496310 A2MP01023 1474 aa11.74□□□□□ -0.53
UBP1-213ENST00000496310 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
UBP1-213ENST00000496310 PLA2R1Q13018 1463 aa11.73□□□□□ -0.53
UBP1-213ENST00000496310 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
UBP1-213ENST00000496310 INO80Q9ULG1 1556 aaPredicted RBP11.73□□□□□ -0.53
UBP1-213ENST00000496310 ADGBQ8N7X0 1667 aa11.72□□□□□ -0.53
UBP1-213ENST00000496310 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
UBP1-213ENST00000496310 FBXO31Q5XUX0 539 aaPredicted RBP11.72□□□□□ -0.53
UBP1-213ENST00000496310 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
UBP1-213ENST00000496310 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.53
UBP1-213ENST00000496310 CCDC18Q5T9S5 1454 aa11.71□□□□□ -0.53
UBP1-213ENST00000496310 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
UBP1-213ENST00000496310 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
UBP1-213ENST00000496310 ALKQ9UM73 1620 aa11.69□□□□□ -0.54
UBP1-213ENST00000496310 TOM1O60784 492 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms