RNA–Protein interactions for RNA: ENST00000495612.1

CLCN1-204, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 278 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-204ENST00000495612 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
CLCN1-204ENST00000495612 CFAP74Q9C0B2 1584 aa17.73■□□□□ 0.43
CLCN1-204ENST00000495612 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
CLCN1-204ENST00000495612 P3H3Q8IVL6 736 aa17.7■□□□□ 0.42
CLCN1-204ENST00000495612 ATP10AO60312 1499 aa17.69■□□□□ 0.42
CLCN1-204ENST00000495612 HECW1Q76N89 1606 aa17.68■□□□□ 0.42
CLCN1-204ENST00000495612 C9orf84Q5VXU9 1444 aa17.66■□□□□ 0.42
CLCN1-204ENST00000495612 RAPGEF6Q8TEU7 1601 aa17.66■□□□□ 0.42
CLCN1-204ENST00000495612 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
CLCN1-204ENST00000495612 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
CLCN1-204ENST00000495612 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
CLCN1-204ENST00000495612 UBAP1LF5GYI3 381 aa17.64■□□□□ 0.41
CLCN1-204ENST00000495612 SCAPERQ9BY12 1400 aa17.63■□□□□ 0.41
CLCN1-204ENST00000495612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLCN1-204ENST00000495612 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
CLCN1-204ENST00000495612 TRAPPC8Q9Y2L5 1435 aa17.59■□□□□ 0.41
CLCN1-204ENST00000495612 SAMD9Q5K651 1589 aa17.58■□□□□ 0.41
CLCN1-204ENST00000495612 PLCH2O75038 1416 aa17.57■□□□□ 0.4
CLCN1-204ENST00000495612 MED1Q15648 1581 aaPredicted RBP17.53■□□□□ 0.4
CLCN1-204ENST00000495612 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
CLCN1-204ENST00000495612 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
CLCN1-204ENST00000495612 ESF1Q9H501 851 aaKnown RBP17.52■□□□□ 0.4
CLCN1-204ENST00000495612 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
CLCN1-204ENST00000495612 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
CLCN1-204ENST00000495612 HSPA1LP34931 641 aa17.49■□□□□ 0.39
CLCN1-204ENST00000495612 C3P01024 1663 aa17.48■□□□□ 0.39
CLCN1-204ENST00000495612 PKD2Q13563 968 aa17.47■□□□□ 0.39
CLCN1-204ENST00000495612 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
CLCN1-204ENST00000495612 AGLP35573 1532 aa17.47■□□□□ 0.39
CLCN1-204ENST00000495612 CNTLNQ9NXG0 1405 aa17.47■□□□□ 0.39
CLCN1-204ENST00000495612 NPATQ14207 1427 aa17.46■□□□□ 0.39
CLCN1-204ENST00000495612 AFAP1Q8N556 730 aa17.45■□□□□ 0.38
CLCN1-204ENST00000495612 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CLCN1-204ENST00000495612 NCKAP5LQ9HCH0 1330 aa17.45■□□□□ 0.38
CLCN1-204ENST00000495612 KDM5CP41229 1560 aa17.45■□□□□ 0.38
CLCN1-204ENST00000495612 TOM1O60784 492 aa17.43■□□□□ 0.38
CLCN1-204ENST00000495612 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
CLCN1-204ENST00000495612 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
CLCN1-204ENST00000495612 DIP2CQ9Y2E4 1556 aa17.41■□□□□ 0.38
CLCN1-204ENST00000495612 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
CLCN1-204ENST00000495612 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
CLCN1-204ENST00000495612 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
CLCN1-204ENST00000495612 TCOF1Q13428 1488 aaKnown RBP17.38■□□□□ 0.37
CLCN1-204ENST00000495612 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
CLCN1-204ENST00000495612 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
CLCN1-204ENST00000495612 CDK13Q14004 1512 aaKnown RBP17.34■□□□□ 0.37
CLCN1-204ENST00000495612 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
CLCN1-204ENST00000495612 MYO5CQ9NQX4 1742 aa17.33■□□□□ 0.37
CLCN1-204ENST00000495612 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
CLCN1-204ENST00000495612 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
CLCN1-204ENST00000495612 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
CLCN1-204ENST00000495612 CPS1P31327 1500 aa17.31■□□□□ 0.36
CLCN1-204ENST00000495612 ARHGAP5Q13017 1502 aa17.31■□□□□ 0.36
CLCN1-204ENST00000495612 MROH2AA6NES4 1674 aa17.3■□□□□ 0.36
CLCN1-204ENST00000495612 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
CLCN1-204ENST00000495612 ZNF142P52746 1687 aaPredicted RBP17.28■□□□□ 0.36
CLCN1-204ENST00000495612 CEP170BQ9Y4F5 1589 aaPredicted RBP17.27■□□□□ 0.35
CLCN1-204ENST00000495612 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
CLCN1-204ENST00000495612 KIF14Q15058 1648 aa17.24■□□□□ 0.35
CLCN1-204ENST00000495612 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
CLCN1-204ENST00000495612 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
CLCN1-204ENST00000495612 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
CLCN1-204ENST00000495612 CLIP1P30622 1438 aa17.21■□□□□ 0.35
CLCN1-204ENST00000495612 ABCC1P33527 1531 aa17.2■□□□□ 0.34
CLCN1-204ENST00000495612 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
CLCN1-204ENST00000495612 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
CLCN1-204ENST00000495612 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
CLCN1-204ENST00000495612 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
CLCN1-204ENST00000495612 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
CLCN1-204ENST00000495612 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
CLCN1-204ENST00000495612 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
CLCN1-204ENST00000495612 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
CLCN1-204ENST00000495612 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
CLCN1-204ENST00000495612 CLTCQ00610 1675 aaKnown RBP17.13■□□□□ 0.33
CLCN1-204ENST00000495612 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
CLCN1-204ENST00000495612 VWDEQ8N2E2 1590 aa17.12■□□□□ 0.33
CLCN1-204ENST00000495612 ANKLE2Q86XL3 938 aa17.12■□□□□ 0.33
CLCN1-204ENST00000495612 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
CLCN1-204ENST00000495612 EEA1Q15075 1411 aa17.12■□□□□ 0.33
CLCN1-204ENST00000495612 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
CLCN1-204ENST00000495612 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
CLCN1-204ENST00000495612 GGT6Q6P531 493 aa17.1■□□□□ 0.33
CLCN1-204ENST00000495612 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
CLCN1-204ENST00000495612 PLXNC1O60486 1568 aa17.09■□□□□ 0.33
CLCN1-204ENST00000495612 MED14O60244 1454 aa17.08■□□□□ 0.32
CLCN1-204ENST00000495612 A2MP01023 1474 aa17.08■□□□□ 0.32
CLCN1-204ENST00000495612 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
CLCN1-204ENST00000495612 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
CLCN1-204ENST00000495612 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
CLCN1-204ENST00000495612 LRRC7Q96NW7 1537 aa17.05■□□□□ 0.32
CLCN1-204ENST00000495612 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
CLCN1-204ENST00000495612 TNRQ92752 1358 aa17.04■□□□□ 0.32
CLCN1-204ENST00000495612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLCN1-204ENST00000495612 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
CLCN1-204ENST00000495612 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
CLCN1-204ENST00000495612 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.31
CLCN1-204ENST00000495612 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
CLCN1-204ENST00000495612 HNRNPMP52272 730 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLCN1-204ENST00000495612 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
CLCN1-204ENST00000495612 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms