RNA–Protein interactions for RNA: ENST00000495571.5

VWA3B-220, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-220ENST00000495571 FAM43AQ8N2R8 423 aa11.52□□□□□ -0.56
VWA3B-220ENST00000495571 IGF1RP08069 1367 aa11.52□□□□□ -0.57
VWA3B-220ENST00000495571 GRIN2AQ12879 1464 aa11.51□□□□□ -0.57
VWA3B-220ENST00000495571 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
VWA3B-220ENST00000495571 MRS2Q9HD23 443 aa11.5□□□□□ -0.57
VWA3B-220ENST00000495571 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
VWA3B-220ENST00000495571 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
VWA3B-220ENST00000495571 ARAP1Q96P48 1450 aa11.49□□□□□ -0.57
VWA3B-220ENST00000495571 ZBED9Q6R2W3 1325 aa11.49□□□□□ -0.57
VWA3B-220ENST00000495571 NUP160Q12769 1436 aa11.49□□□□□ -0.57
VWA3B-220ENST00000495571 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
VWA3B-220ENST00000495571 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
VWA3B-220ENST00000495571 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
VWA3B-220ENST00000495571 SETD5Q9C0A6 1442 aa11.47□□□□□ -0.57
VWA3B-220ENST00000495571 GLIPR1L2Q4G1C9 344 aa11.46□□□□□ -0.57
VWA3B-220ENST00000495571 ARXQ96QS3 562 aa11.46□□□□□ -0.57
VWA3B-220ENST00000495571 EXOC6Q8TAG9 804 aa11.46□□□□□ -0.58
VWA3B-220ENST00000495571 CARMIL1Q5VZK9 1371 aa11.45□□□□□ -0.58
VWA3B-220ENST00000495571 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
VWA3B-220ENST00000495571 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
VWA3B-220ENST00000495571 CTTNBP2Q8WZ74 1663 aa11.45□□□□□ -0.58
VWA3B-220ENST00000495571 RBM10P98175 930 aaKnown RBP11.44□□□□□ -0.58
VWA3B-220ENST00000495571 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
VWA3B-220ENST00000495571 NAP1L5Q96NT1 182 aaPredicted RBP11.44□□□□□ -0.58
VWA3B-220ENST00000495571 HSPA5P11021 654 aaKnown RBP11.44□□□□□ -0.58
VWA3B-220ENST00000495571 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
VWA3B-220ENST00000495571 CEP170Q5SW79 1584 aa11.44□□□□□ -0.58
VWA3B-220ENST00000495571 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
VWA3B-220ENST00000495571 POGKQ9P215 609 aa11.43□□□□□ -0.58
VWA3B-220ENST00000495571 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
VWA3B-220ENST00000495571 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
VWA3B-220ENST00000495571 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
VWA3B-220ENST00000495571 P3H3Q8IVL6 736 aa11.41□□□□□ -0.58
VWA3B-220ENST00000495571 KIAA0586Q9BVV6 1533 aa11.41□□□□□ -0.58
VWA3B-220ENST00000495571 NUDCQ9Y266 331 aa11.4□□□□□ -0.58
VWA3B-220ENST00000495571 TONSLQ96HA7 1378 aa11.39□□□□□ -0.59
VWA3B-220ENST00000495571 SMG6Q86US8 1419 aaKnown RBP11.39□□□□□ -0.59
VWA3B-220ENST00000495571 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
VWA3B-220ENST00000495571 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
VWA3B-220ENST00000495571 AAMPQ13685 434 aa11.37□□□□□ -0.59
VWA3B-220ENST00000495571 PHLDB1Q86UU1 1377 aa11.36□□□□□ -0.59
VWA3B-220ENST00000495571 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
VWA3B-220ENST00000495571 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
VWA3B-220ENST00000495571 RGS3P49796 1198 aa11.35□□□□□ -0.59
VWA3B-220ENST00000495571 PANK2Q9BZ23 570 aa11.35□□□□□ -0.59
VWA3B-220ENST00000495571 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
VWA3B-220ENST00000495571 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
VWA3B-220ENST00000495571 CNTLNQ9NXG0 1405 aa11.34□□□□□ -0.59
VWA3B-220ENST00000495571 KDM5BQ9UGL1 1544 aa11.34□□□□□ -0.59
VWA3B-220ENST00000495571 PLIN1O60240 522 aa11.33□□□□□ -0.6
VWA3B-220ENST00000495571 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
VWA3B-220ENST00000495571 PRDM4Q9UKN5 801 aa11.33□□□□□ -0.6
VWA3B-220ENST00000495571 FGD1P98174 961 aa11.31□□□□□ -0.6
VWA3B-220ENST00000495571 PNNQ9H307 717 aaKnown RBP11.31□□□□□ -0.6
VWA3B-220ENST00000495571 EFCAB5A4FU69 1503 aa11.31□□□□□ -0.6
VWA3B-220ENST00000495571 RIMBP3CA6NJZ7 1639 aa11.3□□□□□ -0.6
VWA3B-220ENST00000495571 RIMBP3BA6NNM3 1639 aa11.3□□□□□ -0.6
VWA3B-220ENST00000495571 RIMBP3Q9UFD9 1639 aa11.3□□□□□ -0.6
VWA3B-220ENST00000495571 RRP1P56182 461 aaKnown RBP11.29□□□□□ -0.6
VWA3B-220ENST00000495571 FBLN2P98095 1184 aa11.29□□□□□ -0.6
VWA3B-220ENST00000495571 SAMD9Q5K651 1589 aa11.29□□□□□ -0.6
VWA3B-220ENST00000495571 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
VWA3B-220ENST00000495571 ARHGEF11O15085 1522 aa11.29□□□□□ -0.6
VWA3B-220ENST00000495571 XRCC6P12956 609 aaKnown RBP eCLIP11.28□□□□□ -0.6
VWA3B-220ENST00000495571 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
VWA3B-220ENST00000495571 ERBB4Q15303 1308 aa11.27□□□□□ -0.6
VWA3B-220ENST00000495571 MS4A1P11836 297 aa11.27□□□□□ -0.61
VWA3B-220ENST00000495571 CARMIL2Q6F5E8 1435 aa11.27□□□□□ -0.61
VWA3B-220ENST00000495571 KIAA0556O60303 1618 aa11.27□□□□□ -0.61
VWA3B-220ENST00000495571 CCDC7Q96M83 1385 aa11.26□□□□□ -0.61
VWA3B-220ENST00000495571 EIF4G2P78344 907 aaKnown RBP eCLIP11.25□□□□□ -0.61
VWA3B-220ENST00000495571 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
VWA3B-220ENST00000495571 ARHGAP35Q9NRY4 1499 aa11.25□□□□□ -0.61
VWA3B-220ENST00000495571 CLCN1P35523 988 aa11.24□□□□□ -0.61
VWA3B-220ENST00000495571 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
VWA3B-220ENST00000495571 BCL11BQ9C0K0 894 aaPredicted RBP11.24□□□□□ -0.61
VWA3B-220ENST00000495571 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
VWA3B-220ENST00000495571 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
VWA3B-220ENST00000495571 DISP1Q96F81 1524 aa11.23□□□□□ -0.61
VWA3B-220ENST00000495571 PDE4CQ08493 712 aa11.23□□□□□ -0.61
VWA3B-220ENST00000495571 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
VWA3B-220ENST00000495571 CDCA7LQ96GN5 454 aa11.23□□□□□ -0.61
VWA3B-220ENST00000495571 KIF7Q2M1P5 1343 aa11.23□□□□□ -0.61
VWA3B-220ENST00000495571 PRG4Q92954 1404 aaPredicted RBP11.23□□□□□ -0.61
VWA3B-220ENST00000495571 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
VWA3B-220ENST00000495571 ARID3AQ99856 593 aa11.22□□□□□ -0.61
VWA3B-220ENST00000495571 CRBNQ96SW2 442 aa11.22□□□□□ -0.61
VWA3B-220ENST00000495571 FOXD1Q16676 465 aa11.22□□□□□ -0.61
VWA3B-220ENST00000495571 RCAN3Q9UKA8 241 aa11.22□□□□□ -0.61
VWA3B-220ENST00000495571 NCOA1Q15788 1441 aa11.21□□□□□ -0.62
VWA3B-220ENST00000495571 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
VWA3B-220ENST00000495571 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
VWA3B-220ENST00000495571 NBPF8Q3BBV2 869 aa11.19□□□□□ -0.62
VWA3B-220ENST00000495571 PTPRKQ15262 1439 aa11.19□□□□□ -0.62
VWA3B-220ENST00000495571 SEC24BO95487 1268 aa11.18□□□□□ -0.62
VWA3B-220ENST00000495571 ERCC6L2Q5T890 1561 aa11.18□□□□□ -0.62
VWA3B-220ENST00000495571 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
VWA3B-220ENST00000495571 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
VWA3B-220ENST00000495571 LRRC9Q6ZRR7 1453 aa11.17□□□□□ -0.62
VWA3B-220ENST00000495571 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms