RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 HECW1Q76N89 1606 aa19.51■□□□□ 0.71
HLA-DOA-206ENST00000495532 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
HLA-DOA-206ENST00000495532 MLECQ14165 292 aa19.46■□□□□ 0.71
HLA-DOA-206ENST00000495532 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
HLA-DOA-206ENST00000495532 ATP10AO60312 1499 aa19.4■□□□□ 0.7
HLA-DOA-206ENST00000495532 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
HLA-DOA-206ENST00000495532 C9orf84Q5VXU9 1444 aa19.39■□□□□ 0.69
HLA-DOA-206ENST00000495532 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.69
HLA-DOA-206ENST00000495532 CEBPAP49715 358 aaPredicted RBP19.38■□□□□ 0.69
HLA-DOA-206ENST00000495532 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
HLA-DOA-206ENST00000495532 UHRF1BP1Q6BDS2 1440 aa19.36■□□□□ 0.69
HLA-DOA-206ENST00000495532 LTBP4Q8N2S1 1624 aa19.35■□□□□ 0.69
HLA-DOA-206ENST00000495532 PLCH2O75038 1416 aa19.34■□□□□ 0.69
HLA-DOA-206ENST00000495532 PTPRTO14522 1441 aa19.34■□□□□ 0.69
HLA-DOA-206ENST00000495532 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
HLA-DOA-206ENST00000495532 C3P01024 1663 aa19.31■□□□□ 0.68
HLA-DOA-206ENST00000495532 MYO5CQ9NQX4 1742 aa19.31■□□□□ 0.68
HLA-DOA-206ENST00000495532 IQSEC2Q5JU85 1478 aa19.3■□□□□ 0.68
HLA-DOA-206ENST00000495532 KDM5CP41229 1560 aa19.28■□□□□ 0.68
HLA-DOA-206ENST00000495532 RANGAP1P46060 587 aaPredicted RBP19.27■□□□□ 0.68
HLA-DOA-206ENST00000495532 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
HLA-DOA-206ENST00000495532 REREQ9P2R6 1566 aa19.26■□□□□ 0.67
HLA-DOA-206ENST00000495532 DIP2CQ9Y2E4 1556 aa19.26■□□□□ 0.67
HLA-DOA-206ENST00000495532 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
HLA-DOA-206ENST00000495532 ABCA6Q8N139 1617 aa19.22■□□□□ 0.67
HLA-DOA-206ENST00000495532 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
HLA-DOA-206ENST00000495532 KIF14Q15058 1648 aa19.22■□□□□ 0.67
HLA-DOA-206ENST00000495532 EFCAB2Q5VUJ9 269 aa19.21■□□□□ 0.67
HLA-DOA-206ENST00000495532 TRAPPC8Q9Y2L5 1435 aa19.18■□□□□ 0.66
HLA-DOA-206ENST00000495532 AGLP35573 1532 aa19.17■□□□□ 0.66
HLA-DOA-206ENST00000495532 AFAP1Q8N556 730 aa19.17■□□□□ 0.66
HLA-DOA-206ENST00000495532 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
HLA-DOA-206ENST00000495532 MLH3Q9UHC1 1453 aa19.15■□□□□ 0.66
HLA-DOA-206ENST00000495532 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.66
HLA-DOA-206ENST00000495532 CDC42BPBQ9Y5S2 1711 aa19.13■□□□□ 0.65
HLA-DOA-206ENST00000495532 MROH2AA6NES4 1674 aa19.11■□□□□ 0.65
HLA-DOA-206ENST00000495532 EEA1Q15075 1411 aa19.1■□□□□ 0.65
HLA-DOA-206ENST00000495532 CNTLNQ9NXG0 1405 aa19.09■□□□□ 0.65
HLA-DOA-206ENST00000495532 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
HLA-DOA-206ENST00000495532 ITSN2Q9NZM3 1697 aa19.09■□□□□ 0.65
HLA-DOA-206ENST00000495532 ABCC1P33527 1531 aa19.09■□□□□ 0.65
HLA-DOA-206ENST00000495532 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
HLA-DOA-206ENST00000495532 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.65
HLA-DOA-206ENST00000495532 ZNF335Q9H4Z2 1342 aaPredicted RBP19.08■□□□□ 0.65
HLA-DOA-206ENST00000495532 MYT1LQ9UL68 1186 aa19.08■□□□□ 0.64
HLA-DOA-206ENST00000495532 NPATQ14207 1427 aa19.08■□□□□ 0.64
HLA-DOA-206ENST00000495532 UBAP1LF5GYI3 381 aa19.07■□□□□ 0.64
HLA-DOA-206ENST00000495532 ESF1Q9H501 851 aaKnown RBP19.07■□□□□ 0.64
HLA-DOA-206ENST00000495532 ZNF142P52746 1687 aaPredicted RBP19.07■□□□□ 0.64
HLA-DOA-206ENST00000495532 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
HLA-DOA-206ENST00000495532 FMN1Q68DA7 1419 aa19.06■□□□□ 0.64
HLA-DOA-206ENST00000495532 MED1Q15648 1581 aaPredicted RBP19.04■□□□□ 0.64
HLA-DOA-206ENST00000495532 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
HLA-DOA-206ENST00000495532 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
HLA-DOA-206ENST00000495532 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
HLA-DOA-206ENST00000495532 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
HLA-DOA-206ENST00000495532 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
HLA-DOA-206ENST00000495532 CLIP1P30622 1438 aa19.02■□□□□ 0.64
HLA-DOA-206ENST00000495532 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
HLA-DOA-206ENST00000495532 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
HLA-DOA-206ENST00000495532 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
HLA-DOA-206ENST00000495532 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
HLA-DOA-206ENST00000495532 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
HLA-DOA-206ENST00000495532 CLTCQ00610 1675 aaKnown RBP18.98■□□□□ 0.63
HLA-DOA-206ENST00000495532 CDC42BPAQ5VT25 1732 aa18.97■□□□□ 0.63
HLA-DOA-206ENST00000495532 SAMD9LQ8IVG5 1584 aa18.97■□□□□ 0.63
HLA-DOA-206ENST00000495532 PKD2Q13563 968 aa18.96■□□□□ 0.63
HLA-DOA-206ENST00000495532 HSPA1LP34931 641 aa18.93■□□□□ 0.62
HLA-DOA-206ENST00000495532 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
HLA-DOA-206ENST00000495532 PTPRKQ15262 1439 aa18.92■□□□□ 0.62
HLA-DOA-206ENST00000495532 PPP6R1Q9UPN7 881 aa18.89■□□□□ 0.61
HLA-DOA-206ENST00000495532 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.61
HLA-DOA-206ENST00000495532 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
HLA-DOA-206ENST00000495532 INO80Q9ULG1 1556 aaPredicted RBP18.88■□□□□ 0.61
HLA-DOA-206ENST00000495532 DNMT1P26358 1616 aaKnown RBP18.88■□□□□ 0.61
HLA-DOA-206ENST00000495532 CPS1P31327 1500 aa18.87■□□□□ 0.61
HLA-DOA-206ENST00000495532 ATP7AQ04656 1500 aa18.87■□□□□ 0.61
HLA-DOA-206ENST00000495532 NEURL4Q96JN8 1562 aa18.87■□□□□ 0.61
HLA-DOA-206ENST00000495532 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
HLA-DOA-206ENST00000495532 CCDC18Q5T9S5 1454 aa18.85■□□□□ 0.61
HLA-DOA-206ENST00000495532 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
HLA-DOA-206ENST00000495532 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
HLA-DOA-206ENST00000495532 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
HLA-DOA-206ENST00000495532 A2MP01023 1474 aa18.84■□□□□ 0.61
HLA-DOA-206ENST00000495532 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.61
HLA-DOA-206ENST00000495532 TOM1O60784 492 aa18.82■□□□□ 0.6
HLA-DOA-206ENST00000495532 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
HLA-DOA-206ENST00000495532 SHANK2Q9UPX8 1470 aa18.82■□□□□ 0.6
HLA-DOA-206ENST00000495532 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
HLA-DOA-206ENST00000495532 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
HLA-DOA-206ENST00000495532 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
HLA-DOA-206ENST00000495532 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
HLA-DOA-206ENST00000495532 VWDEQ8N2E2 1590 aa18.79■□□□□ 0.6
HLA-DOA-206ENST00000495532 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
HLA-DOA-206ENST00000495532 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
HLA-DOA-206ENST00000495532 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.6
HLA-DOA-206ENST00000495532 GGT6Q6P531 493 aa18.77■□□□□ 0.6
HLA-DOA-206ENST00000495532 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
HLA-DOA-206ENST00000495532 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
HLA-DOA-206ENST00000495532 STRCP1A6NGW2 1772 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms