RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
RPSA-209ENST00000495394 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
RPSA-209ENST00000495394 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
RPSA-209ENST00000495394 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
RPSA-209ENST00000495394 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■□□ 17
RPSA-209ENST00000495394 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
RPSA-209ENST00000495394 CWC22Q9HCG8 908 aaKnown RBP12.85□□□□□ -0.35
RPSA-209ENST00000495394 PRDM16Q9HAZ2 1276 aa12.84□□□□□ -0.35
RPSA-209ENST00000495394 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
RPSA-209ENST00000495394 WWC1Q8IX03 1113 aa12.84□□□□□ -0.35
RPSA-209ENST00000495394 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
RPSA-209ENST00000495394 CYB5RLQ6IPT4 315 aa12.82□□□□□ -0.36
RPSA-209ENST00000495394 PTMSP20962 102 aa12.82□□□□□ -0.36
RPSA-209ENST00000495394 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
RPSA-209ENST00000495394 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
RPSA-209ENST00000495394 SETQ01105 290 aaPredicted RBP12.81□□□□□ -0.36
RPSA-209ENST00000495394 NBR1Q14596 966 aa12.8□□□□□ -0.36
RPSA-209ENST00000495394 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
RPSA-209ENST00000495394 MCCP23508 829 aa12.79□□□□□ -0.36
RPSA-209ENST00000495394 KCNG1Q9UIX4 513 aa12.79□□□□□ -0.36
RPSA-209ENST00000495394 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
RPSA-209ENST00000495394 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
RPSA-209ENST00000495394 ARID4BQ4LE39 1312 aaPredicted RBP12.77□□□□□ -0.37
RPSA-209ENST00000495394 SNAPC4Q5SXM2 1469 aa12.76□□□□□ -0.37
RPSA-209ENST00000495394 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
RPSA-209ENST00000495394 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
RPSA-209ENST00000495394 CHD1O14646 1710 aa12.74□□□□□ -0.37
RPSA-209ENST00000495394 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
RPSA-209ENST00000495394 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
RPSA-209ENST00000495394 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
RPSA-209ENST00000495394 CUL7Q14999 1698 aa12.74□□□□□ -0.37
RPSA-209ENST00000495394 NEFMP07197 916 aa12.73□□□□□ -0.37
RPSA-209ENST00000495394 FAM43BQ6ZT52 329 aaPredicted RBP12.73□□□□□ -0.37
RPSA-209ENST00000495394 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
RPSA-209ENST00000495394 ZNF428Q96B54 188 aa12.71□□□□□ -0.38
RPSA-209ENST00000495394 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
RPSA-209ENST00000495394 FAM177A1Q8N128 213 aaPredicted RBP12.7□□□□□ -0.38
RPSA-209ENST00000495394 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
RPSA-209ENST00000495394 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
RPSA-209ENST00000495394 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
RPSA-209ENST00000495394 EEA1Q15075 1411 aa12.69□□□□□ -0.38
RPSA-209ENST00000495394 IGF1RP08069 1367 aa12.69□□□□□ -0.38
RPSA-209ENST00000495394 ANAPC15P60006 121 aa12.68□□□□□ -0.38
RPSA-209ENST00000495394 PCGF6Q9BYE7 350 aa12.68□□□□□ -0.38
RPSA-209ENST00000495394 MAFGO15525 162 aa12.66□□□□□ -0.38
RPSA-209ENST00000495394 GRIN2AQ12879 1464 aa12.66□□□□□ -0.38
RPSA-209ENST00000495394 RAD21O60216 631 aa12.65□□□□□ -0.38
RPSA-209ENST00000495394 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
RPSA-209ENST00000495394 DNAJC2Q99543 621 aaKnown RBP12.65□□□□□ -0.38
RPSA-209ENST00000495394 CCDC27Q2M243 656 aa12.65□□□□□ -0.39
RPSA-209ENST00000495394 RTL5Q5HYW3 569 aaPredicted RBP12.65□□□□□ -0.39
RPSA-209ENST00000495394 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.39
RPSA-209ENST00000495394 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
RPSA-209ENST00000495394 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
RPSA-209ENST00000495394 FAM193AP78312 1265 aa12.63□□□□□ -0.39
RPSA-209ENST00000495394 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
RPSA-209ENST00000495394 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
RPSA-209ENST00000495394 GPATCH11Q8N954 259 aa12.61□□□□□ -0.39
RPSA-209ENST00000495394 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
RPSA-209ENST00000495394 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
RPSA-209ENST00000495394 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
RPSA-209ENST00000495394 C1orf115Q9H7X2 142 aa12.6□□□□□ -0.39
RPSA-209ENST00000495394 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
RPSA-209ENST00000495394 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
RPSA-209ENST00000495394 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
RPSA-209ENST00000495394 CEP170Q5SW79 1584 aa12.59□□□□□ -0.39
RPSA-209ENST00000495394 NUP160Q12769 1436 aa12.58□□□□□ -0.39
RPSA-209ENST00000495394 CLASP1Q7Z460 1538 aa12.58□□□□□ -0.4
RPSA-209ENST00000495394 KIF21BO75037 1637 aa12.57□□□□□ -0.4
RPSA-209ENST00000495394 CLGNO14967 610 aa12.57□□□□□ -0.4
RPSA-209ENST00000495394 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
RPSA-209ENST00000495394 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
RPSA-209ENST00000495394 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
RPSA-209ENST00000495394 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
RPSA-209ENST00000495394 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
RPSA-209ENST00000495394 PHF14O94880 888 aa12.53□□□□□ -0.4
RPSA-209ENST00000495394 FOXD4L5Q5VV16 416 aaPredicted RBP12.53□□□□□ -0.4
RPSA-209ENST00000495394 FOXD4L4Q8WXT5 416 aaPredicted RBP12.53□□□□□ -0.4
RPSA-209ENST00000495394 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
RPSA-209ENST00000495394 ZNF622Q969S3 477 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPSA-209ENST00000495394 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
RPSA-209ENST00000495394 RRP9O43818 475 aaKnown RBP12.5□□□□□ -0.41
RPSA-209ENST00000495394 IQGAP2Q13576 1575 aa12.5□□□□□ -0.41
RPSA-209ENST00000495394 KDM4AO75164 1064 aa12.49□□□□□ -0.41
RPSA-209ENST00000495394 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
RPSA-209ENST00000495394 MMP14P50281 582 aa12.47□□□□□ -0.41
RPSA-209ENST00000495394 PRDM4Q9UKN5 801 aa12.47□□□□□ -0.41
RPSA-209ENST00000495394 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.42
RPSA-209ENST00000495394 BRPF1P55201 1214 aaPredicted RBP12.46□□□□□ -0.42
RPSA-209ENST00000495394 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
RPSA-209ENST00000495394 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
RPSA-209ENST00000495394 FOXD1Q16676 465 aa12.44□□□□□ -0.42
RPSA-209ENST00000495394 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
RPSA-209ENST00000495394 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
RPSA-209ENST00000495394 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
RPSA-209ENST00000495394 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
RPSA-209ENST00000495394 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
RPSA-209ENST00000495394 AXDND1Q5T1B0 1012 aaPredicted RBP12.41□□□□□ -0.42
RPSA-209ENST00000495394 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
RPSA-209ENST00000495394 TMTC2Q8N394 836 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms