RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
RPSA-209ENST00000495394 SLC24A1O60721 1099 aa17.99■□□□□ 0.47
RPSA-209ENST00000495394 MYT1Q01538 1121 aa17.44■□□□□ 0.38
RPSA-209ENST00000495394 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.35
RPSA-209ENST00000495394 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
RPSA-209ENST00000495394 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
RPSA-209ENST00000495394 PRKCSHP14314 528 aaPredicted RBP16.67■□□□□ 0.26
RPSA-209ENST00000495394 APLP2Q06481 763 aa16.64■□□□□ 0.25
RPSA-209ENST00000495394 ERICH6Q7L0X2 663 aa16.57■□□□□ 0.24
RPSA-209ENST00000495394 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
RPSA-209ENST00000495394 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
RPSA-209ENST00000495394 ABCC9O60706 1549 aa15.79■□□□□ 0.12
RPSA-209ENST00000495394 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
RPSA-209ENST00000495394 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
RPSA-209ENST00000495394 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
RPSA-209ENST00000495394 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
RPSA-209ENST00000495394 AEBP2Q6ZN18 517 aaPredicted RBP15.6■□□□□ 0.09
RPSA-209ENST00000495394 ARXQ96QS3 562 aa15.57■□□□□ 0.08
RPSA-209ENST00000495394 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
RPSA-209ENST00000495394 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
RPSA-209ENST00000495394 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
RPSA-209ENST00000495394 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
RPSA-209ENST00000495394 TIMELESSQ9UNS1 1208 aa15.24■□□□□ 0.03
RPSA-209ENST00000495394 DNAJC5BQ9UF47 199 aa15.19■□□□□ 0.02
RPSA-209ENST00000495394 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
RPSA-209ENST00000495394 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
RPSA-209ENST00000495394 NACADO15069 1562 aa15.08■□□□□ 0
RPSA-209ENST00000495394 KLHL34Q8N239 644 aa15.07■□□□□ 0
RPSA-209ENST00000495394 PLEKHG5O94827 1062 aa15.05■□□□□ 0
RPSA-209ENST00000495394 MYO15BQ96JP2 1530 aa15.05■□□□□ 0
RPSA-209ENST00000495394 DCAF1Q9Y4B6 1507 aa15.05■□□□□ 0
RPSA-209ENST00000495394 RB1CC1Q8TDY2 1594 aa15.05■□□□□ 0
RPSA-209ENST00000495394 HOMEZQ8IX15 550 aa15.02□□□□□ -0.01
RPSA-209ENST00000495394 DCAF8L2P0C7V8 631 aa14.99□□□□□ -0.01
RPSA-209ENST00000495394 TULP1O00294 542 aaPredicted RBP14.95□□□□□ -0.02
RPSA-209ENST00000495394 KCNA4P22459 653 aa14.79□□□□□ -0.04
RPSA-209ENST00000495394 PODXL2Q9NZ53 605 aa14.78□□□□□ -0.04
RPSA-209ENST00000495394 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
RPSA-209ENST00000495394 TAOK2Q9UL54 1235 aa14.75□□□□□ -0.05
RPSA-209ENST00000495394 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
RPSA-209ENST00000495394 UBE2Q2Q8WVN8 375 aa14.64□□□□□ -0.07
RPSA-209ENST00000495394 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
RPSA-209ENST00000495394 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
RPSA-209ENST00000495394 NPM2Q86SE8 214 aaKnown RBP14.52□□□□□ -0.09
RPSA-209ENST00000495394 TPRNQ4KMQ1 711 aa14.48□□□□□ -0.09
RPSA-209ENST00000495394 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
RPSA-209ENST00000495394 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
RPSA-209ENST00000495394 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
RPSA-209ENST00000495394 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
RPSA-209ENST00000495394 BCANQ96GW7 911 aa14.47□□□□□ -0.09
RPSA-209ENST00000495394 CENPBP07199 599 aaPredicted RBP14.42□□□□□ -0.1
RPSA-209ENST00000495394 GTF3C3Q9Y5Q9 886 aa14.41□□□□□ -0.1
RPSA-209ENST00000495394 SCAF1Q9H7N4 1312 aaKnown RBP14.39□□□□□ -0.11
RPSA-209ENST00000495394 CECR2Q9BXF3 1484 aa14.34□□□□□ -0.11
RPSA-209ENST00000495394 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
RPSA-209ENST00000495394 HRCP23327 699 aa14.32□□□□□ -0.12
RPSA-209ENST00000495394 FBXO3Q9UK99 471 aa14.3□□□□□ -0.12
RPSA-209ENST00000495394 PKNOX2Q96KN3 472 aa14.3□□□□□ -0.12
RPSA-209ENST00000495394 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
RPSA-209ENST00000495394 PDE4CQ08493 712 aa14.27□□□□□ -0.13
RPSA-209ENST00000495394 NEFLP07196 543 aa14.26□□□□□ -0.13
RPSA-209ENST00000495394 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
RPSA-209ENST00000495394 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
RPSA-209ENST00000495394 CHMP4AQ9BY43 222 aa14.1□□□□□ -0.15
RPSA-209ENST00000495394 TAF7LQ5H9L4 462 aa14.1□□□□□ -0.15
RPSA-209ENST00000495394 BAZ1AQ9NRL2 1556 aaPredicted RBP14.07□□□□□ -0.16
RPSA-209ENST00000495394 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
RPSA-209ENST00000495394 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
RPSA-209ENST00000495394 ANP32EQ9BTT0 268 aa14.05□□□□□ -0.16
RPSA-209ENST00000495394 ANO8Q9HCE9 1232 aaPredicted RBP14.05□□□□□ -0.16
RPSA-209ENST00000495394 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
RPSA-209ENST00000495394 PLCB2Q00722 1185 aa14.02□□□□□ -0.16
RPSA-209ENST00000495394 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
RPSA-209ENST00000495394 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
RPSA-209ENST00000495394 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
RPSA-209ENST00000495394 CUX2O14529 1486 aa13.97□□□□□ -0.17
RPSA-209ENST00000495394 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
RPSA-209ENST00000495394 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
RPSA-209ENST00000495394 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
RPSA-209ENST00000495394 FGD1P98174 961 aa13.94□□□□□ -0.18
RPSA-209ENST00000495394 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
RPSA-209ENST00000495394 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
RPSA-209ENST00000495394 DHX37Q8IY37 1157 aaKnown RBP13.91□□□□□ -0.18
RPSA-209ENST00000495394 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
RPSA-209ENST00000495394 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
RPSA-209ENST00000495394 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
RPSA-209ENST00000495394 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
RPSA-209ENST00000495394 HMGXB3Q12766 1538 aa13.87□□□□□ -0.19
RPSA-209ENST00000495394 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
RPSA-209ENST00000495394 WIZO95785 1651 aa13.86□□□□□ -0.19
RPSA-209ENST00000495394 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
RPSA-209ENST00000495394 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
RPSA-209ENST00000495394 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
RPSA-209ENST00000495394 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
RPSA-209ENST00000495394 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
RPSA-209ENST00000495394 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
RPSA-209ENST00000495394 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
RPSA-209ENST00000495394 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
RPSA-209ENST00000495394 ZNF326Q5BKZ1 582 aaKnown RBP13.64□□□□□ -0.23
RPSA-209ENST00000495394 AAMPQ13685 434 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms