RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
GARNL3-219ENST00000495172 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
GARNL3-219ENST00000495172 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
GARNL3-219ENST00000495172 P3H3Q8IVL6 736 aa16.03■□□□□ 0.16
GARNL3-219ENST00000495172 EFCAB5A4FU69 1503 aa16.03■□□□□ 0.16
GARNL3-219ENST00000495172 NCOA1Q15788 1441 aa16.02■□□□□ 0.16
GARNL3-219ENST00000495172 NCKAP5LQ9HCH0 1330 aa16.02■□□□□ 0.16
GARNL3-219ENST00000495172 SETD1BQ9UPS6 1966 aaKnown RBP16.01■□□□□ 0.15
GARNL3-219ENST00000495172 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
GARNL3-219ENST00000495172 C3P01024 1663 aa15.99■□□□□ 0.15
GARNL3-219ENST00000495172 RGS17Q9UGC6 210 aaPredicted RBP15.99■□□□□ 0.15
GARNL3-219ENST00000495172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
GARNL3-219ENST00000495172 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
GARNL3-219ENST00000495172 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
GARNL3-219ENST00000495172 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
GARNL3-219ENST00000495172 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
GARNL3-219ENST00000495172 GOLGA3Q08378 1498 aa15.94■□□□□ 0.14
GARNL3-219ENST00000495172 ATP10AO60312 1499 aa15.93■□□□□ 0.14
GARNL3-219ENST00000495172 C9orf84Q5VXU9 1444 aa15.92■□□□□ 0.14
GARNL3-219ENST00000495172 FOXD1Q16676 465 aa15.91■□□□□ 0.14
GARNL3-219ENST00000495172 SETD1AO15047 1707 aaKnown RBP15.91■□□□□ 0.14
GARNL3-219ENST00000495172 MAGI2Q86UL8 1455 aa15.91■□□□□ 0.14
GARNL3-219ENST00000495172 CFAP74Q9C0B2 1584 aa15.88■□□□□ 0.13
GARNL3-219ENST00000495172 SCAPERQ9BY12 1400 aa15.88■□□□□ 0.13
GARNL3-219ENST00000495172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
GARNL3-219ENST00000495172 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
GARNL3-219ENST00000495172 TRAPPC8Q9Y2L5 1435 aa15.86■□□□□ 0.13
GARNL3-219ENST00000495172 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
GARNL3-219ENST00000495172 RAPGEF6Q8TEU7 1601 aa15.85■□□□□ 0.13
GARNL3-219ENST00000495172 TOM1O60784 492 aa15.82■□□□□ 0.12
GARNL3-219ENST00000495172 NUP153P49790 1475 aaKnown RBP15.82■□□□□ 0.12
GARNL3-219ENST00000495172 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.12
GARNL3-219ENST00000495172 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
GARNL3-219ENST00000495172 DIP2CQ9Y2E4 1556 aa15.77■□□□□ 0.11
GARNL3-219ENST00000495172 AFAP1Q8N556 730 aa15.76■□□□□ 0.11
GARNL3-219ENST00000495172 MYT1LQ9UL68 1186 aa15.76■□□□□ 0.11
GARNL3-219ENST00000495172 ESF1Q9H501 851 aaKnown RBP15.75■□□□□ 0.11
GARNL3-219ENST00000495172 TCOF1Q13428 1488 aaKnown RBP15.75■□□□□ 0.11
GARNL3-219ENST00000495172 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
GARNL3-219ENST00000495172 ABCA6Q8N139 1617 aa15.74■□□□□ 0.11
GARNL3-219ENST00000495172 MYO3AQ8NEV4 1616 aa15.72■□□□□ 0.11
GARNL3-219ENST00000495172 PKD2Q13563 968 aa15.71■□□□□ 0.11
GARNL3-219ENST00000495172 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
GARNL3-219ENST00000495172 PLA2R1Q13018 1463 aa15.69■□□□□ 0.1
GARNL3-219ENST00000495172 SHANK2Q9UPX8 1470 aa15.69■□□□□ 0.1
GARNL3-219ENST00000495172 ZNF142P52746 1687 aaPredicted RBP15.69■□□□□ 0.1
GARNL3-219ENST00000495172 PLCH2O75038 1416 aa15.68■□□□□ 0.1
GARNL3-219ENST00000495172 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
GARNL3-219ENST00000495172 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
GARNL3-219ENST00000495172 CPS1P31327 1500 aa15.67■□□□□ 0.1
GARNL3-219ENST00000495172 KDM5CP41229 1560 aa15.66■□□□□ 0.1
GARNL3-219ENST00000495172 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
GARNL3-219ENST00000495172 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
GARNL3-219ENST00000495172 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
GARNL3-219ENST00000495172 UPF1Q92900 1129 aaKnown RBP eCLIP15.65■□□□□ 0.1
GARNL3-219ENST00000495172 NPATQ14207 1427 aa15.65■□□□□ 0.1
GARNL3-219ENST00000495172 PTPRKQ15262 1439 aa15.65■□□□□ 0.1
GARNL3-219ENST00000495172 NEURL4Q96JN8 1562 aa15.65■□□□□ 0.1
GARNL3-219ENST00000495172 AGLP35573 1532 aa15.64■□□□□ 0.09
GARNL3-219ENST00000495172 REREQ9P2R6 1566 aa15.64■□□□□ 0.09
GARNL3-219ENST00000495172 ZNF518AQ6AHZ1 1483 aa15.64■□□□□ 0.09
GARNL3-219ENST00000495172 VWDEQ8N2E2 1590 aa15.63■□□□□ 0.09
GARNL3-219ENST00000495172 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
GARNL3-219ENST00000495172 MYO5CQ9NQX4 1742 aa15.61■□□□□ 0.09
GARNL3-219ENST00000495172 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
GARNL3-219ENST00000495172 STRCP1A6NGW2 1772 aa15.61■□□□□ 0.09
GARNL3-219ENST00000495172 MROH2AA6NES4 1674 aa15.6■□□□□ 0.09
GARNL3-219ENST00000495172 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
GARNL3-219ENST00000495172 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
GARNL3-219ENST00000495172 PRXQ9BXM0 1461 aa15.58■□□□□ 0.08
GARNL3-219ENST00000495172 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
GARNL3-219ENST00000495172 KIF14Q15058 1648 aa15.57■□□□□ 0.08
GARNL3-219ENST00000495172 KIDINS220Q9ULH0 1771 aa15.55■□□□□ 0.08
GARNL3-219ENST00000495172 ARHGAP5Q13017 1502 aa15.55■□□□□ 0.08
GARNL3-219ENST00000495172 LRRC7Q96NW7 1537 aa15.54■□□□□ 0.08
GARNL3-219ENST00000495172 MLH3Q9UHC1 1453 aa15.54■□□□□ 0.08
GARNL3-219ENST00000495172 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
GARNL3-219ENST00000495172 RNF17Q9BXT8 1623 aaKnown RBP15.52■□□□□ 0.08
GARNL3-219ENST00000495172 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
GARNL3-219ENST00000495172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.48■□□□□ 0.07
GARNL3-219ENST00000495172 CDC42BPBQ9Y5S2 1711 aa15.47■□□□□ 0.07
GARNL3-219ENST00000495172 ITSN2Q9NZM3 1697 aa15.45■□□□□ 0.06
GARNL3-219ENST00000495172 FBXO31Q5XUX0 539 aaPredicted RBP15.45■□□□□ 0.06
GARNL3-219ENST00000495172 GGT6Q6P531 493 aa15.45■□□□□ 0.06
GARNL3-219ENST00000495172 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
GARNL3-219ENST00000495172 XIRP1Q702N8 1843 aaKnown RBP15.45■□□□□ 0.06
GARNL3-219ENST00000495172 NPHP4O75161 1426 aaPredicted RBP15.44■□□□□ 0.06
GARNL3-219ENST00000495172 ABCC1P33527 1531 aa15.43■□□□□ 0.06
GARNL3-219ENST00000495172 ANKLE2Q86XL3 938 aa15.41■□□□□ 0.06
GARNL3-219ENST00000495172 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
GARNL3-219ENST00000495172 SYNMO15061 1565 aa15.39■□□□□ 0.05
GARNL3-219ENST00000495172 SAMD9LQ8IVG5 1584 aa15.38■□□□□ 0.05
GARNL3-219ENST00000495172 ROBO1Q9Y6N7 1651 aa15.37■□□□□ 0.05
GARNL3-219ENST00000495172 SETBP1Q9Y6X0 1596 aa15.36■□□□□ 0.05
GARNL3-219ENST00000495172 MED14O60244 1454 aa15.36■□□□□ 0.05
GARNL3-219ENST00000495172 TNRQ92752 1358 aa15.36■□□□□ 0.05
GARNL3-219ENST00000495172 LRP6O75581 1613 aa15.35■□□□□ 0.05
GARNL3-219ENST00000495172 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
GARNL3-219ENST00000495172 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
GARNL3-219ENST00000495172 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms