RNA–Protein interactions for RNA: ENST00000495099.2

HDAC11-219, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 198 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-219ENST00000495099 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
HDAC11-219ENST00000495099 ATP10BO94823 1461 aa20.39■□□□□ 0.85
HDAC11-219ENST00000495099 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
HDAC11-219ENST00000495099 FHOD3Q2V2M9 1422 aa20.36■□□□□ 0.85
HDAC11-219ENST00000495099 ZMYM4Q5VZL5 1548 aa20.36■□□□□ 0.85
HDAC11-219ENST00000495099 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
HDAC11-219ENST00000495099 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
HDAC11-219ENST00000495099 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
HDAC11-219ENST00000495099 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
HDAC11-219ENST00000495099 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
HDAC11-219ENST00000495099 HECW1Q76N89 1606 aa20.33■□□□□ 0.84
HDAC11-219ENST00000495099 C3P01024 1663 aa20.31■□□□□ 0.84
HDAC11-219ENST00000495099 CFAP74Q9C0B2 1584 aa20.29■□□□□ 0.84
HDAC11-219ENST00000495099 NCOA1Q15788 1441 aa20.29■□□□□ 0.84
HDAC11-219ENST00000495099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
HDAC11-219ENST00000495099 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
HDAC11-219ENST00000495099 MAGI2Q86UL8 1455 aa20.25■□□□□ 0.83
HDAC11-219ENST00000495099 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
HDAC11-219ENST00000495099 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
HDAC11-219ENST00000495099 ATP10AO60312 1499 aa20.22■□□□□ 0.83
HDAC11-219ENST00000495099 NCKAP5LQ9HCH0 1330 aa20.22■□□□□ 0.83
HDAC11-219ENST00000495099 C9orf84Q5VXU9 1444 aa20.21■□□□□ 0.83
HDAC11-219ENST00000495099 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
HDAC11-219ENST00000495099 SAMD9Q5K651 1589 aa20.19■□□□□ 0.82
HDAC11-219ENST00000495099 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
HDAC11-219ENST00000495099 EEA1Q15075 1411 aa20.15■□□□□ 0.82
HDAC11-219ENST00000495099 RAPGEF6Q8TEU7 1601 aa20.15■□□□□ 0.82
HDAC11-219ENST00000495099 TRAPPC8Q9Y2L5 1435 aa20.12■□□□□ 0.81
HDAC11-219ENST00000495099 TOM1O60784 492 aa20.12■□□□□ 0.81
HDAC11-219ENST00000495099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
HDAC11-219ENST00000495099 SCAPERQ9BY12 1400 aa20.11■□□□□ 0.81
HDAC11-219ENST00000495099 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
HDAC11-219ENST00000495099 SETD1AO15047 1707 aaKnown RBP20.09■□□□□ 0.81
HDAC11-219ENST00000495099 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
HDAC11-219ENST00000495099 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
HDAC11-219ENST00000495099 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
HDAC11-219ENST00000495099 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
HDAC11-219ENST00000495099 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
HDAC11-219ENST00000495099 PLEKHD1A6NEE1 506 aa20.02■□□□□ 0.8
HDAC11-219ENST00000495099 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
HDAC11-219ENST00000495099 DIP2CQ9Y2E4 1556 aa19.99■□□□□ 0.79
HDAC11-219ENST00000495099 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
HDAC11-219ENST00000495099 PKD2Q13563 968 aa19.97■□□□□ 0.79
HDAC11-219ENST00000495099 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
HDAC11-219ENST00000495099 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
HDAC11-219ENST00000495099 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
HDAC11-219ENST00000495099 ZNF142P52746 1687 aaPredicted RBP19.95■□□□□ 0.78
HDAC11-219ENST00000495099 ABCA6Q8N139 1617 aa19.94■□□□□ 0.78
HDAC11-219ENST00000495099 TCOF1Q13428 1488 aaKnown RBP19.94■□□□□ 0.78
HDAC11-219ENST00000495099 CPS1P31327 1500 aa19.94■□□□□ 0.78
HDAC11-219ENST00000495099 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
HDAC11-219ENST00000495099 CDK13Q14004 1512 aaKnown RBP19.93■□□□□ 0.78
HDAC11-219ENST00000495099 AFAP1Q8N556 730 aa19.91■□□□□ 0.78
HDAC11-219ENST00000495099 PTPRKQ15262 1439 aa19.91■□□□□ 0.78
HDAC11-219ENST00000495099 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
HDAC11-219ENST00000495099 MYO5CQ9NQX4 1742 aa19.9■□□□□ 0.78
HDAC11-219ENST00000495099 PLCH2O75038 1416 aa19.9■□□□□ 0.78
HDAC11-219ENST00000495099 NPATQ14207 1427 aa19.9■□□□□ 0.78
HDAC11-219ENST00000495099 AGLP35573 1532 aa19.9■□□□□ 0.78
HDAC11-219ENST00000495099 REREQ9P2R6 1566 aa19.9■□□□□ 0.78
HDAC11-219ENST00000495099 MROH2AA6NES4 1674 aa19.89■□□□□ 0.77
HDAC11-219ENST00000495099 ZNF518AQ6AHZ1 1483 aa19.89■□□□□ 0.77
HDAC11-219ENST00000495099 KDM5CP41229 1560 aa19.88■□□□□ 0.77
HDAC11-219ENST00000495099 SHANK2Q9UPX8 1470 aa19.88■□□□□ 0.77
HDAC11-219ENST00000495099 CNTLNQ9NXG0 1405 aa19.88■□□□□ 0.77
HDAC11-219ENST00000495099 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
HDAC11-219ENST00000495099 ARHGAP35Q9NRY4 1499 aa19.86■□□□□ 0.77
HDAC11-219ENST00000495099 EFCAB2Q5VUJ9 269 aa19.83■□□□□ 0.77
HDAC11-219ENST00000495099 CLTCQ00610 1675 aaKnown RBP19.83■□□□□ 0.76
HDAC11-219ENST00000495099 ZMYM3Q14202 1370 aa19.83■□□□□ 0.76
HDAC11-219ENST00000495099 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
HDAC11-219ENST00000495099 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
HDAC11-219ENST00000495099 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.76
HDAC11-219ENST00000495099 UPF1Q92900 1129 aaKnown RBP eCLIP19.77■□□□□ 0.76
HDAC11-219ENST00000495099 VWDEQ8N2E2 1590 aa19.77■□□□□ 0.76
HDAC11-219ENST00000495099 DNMT1P26358 1616 aaKnown RBP19.76■□□□□ 0.75
HDAC11-219ENST00000495099 SRCAPQ6ZRS2 3230 aa19.76■□□□□ 0.75
HDAC11-219ENST00000495099 ARHGAP5Q13017 1502 aa19.75■□□□□ 0.75
HDAC11-219ENST00000495099 KIF14Q15058 1648 aa19.74■□□□□ 0.75
HDAC11-219ENST00000495099 RNF17Q9BXT8 1623 aaKnown RBP19.74■□□□□ 0.75
HDAC11-219ENST00000495099 STRCP1A6NGW2 1772 aa19.74■□□□□ 0.75
HDAC11-219ENST00000495099 MLH3Q9UHC1 1453 aa19.73■□□□□ 0.75
HDAC11-219ENST00000495099 KIDINS220Q9ULH0 1771 aa19.72■□□□□ 0.75
HDAC11-219ENST00000495099 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
HDAC11-219ENST00000495099 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
HDAC11-219ENST00000495099 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
HDAC11-219ENST00000495099 LRRC7Q96NW7 1537 aa19.66■□□□□ 0.74
HDAC11-219ENST00000495099 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
HDAC11-219ENST00000495099 CDC42BPBQ9Y5S2 1711 aa19.65■□□□□ 0.74
HDAC11-219ENST00000495099 CLIP1P30622 1438 aa19.63■□□□□ 0.73
HDAC11-219ENST00000495099 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
HDAC11-219ENST00000495099 SYNMO15061 1565 aa19.61■□□□□ 0.73
HDAC11-219ENST00000495099 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
HDAC11-219ENST00000495099 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
HDAC11-219ENST00000495099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.58■□□□□ 0.73
HDAC11-219ENST00000495099 ABCC1P33527 1531 aa19.58■□□□□ 0.73
HDAC11-219ENST00000495099 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
HDAC11-219ENST00000495099 XIRP1Q702N8 1843 aaKnown RBP19.58■□□□□ 0.72
HDAC11-219ENST00000495099 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
HDAC11-219ENST00000495099 GGT6Q6P531 493 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms