RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 RIMBP3CA6NJZ7 1639 aa9.72□□□□□ -0.85
NXF3-206ENST00000494300 RIMBP3BA6NNM3 1639 aa9.72□□□□□ -0.85
NXF3-206ENST00000494300 RIMBP3Q9UFD9 1639 aa9.72□□□□□ -0.85
NXF3-206ENST00000494300 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
NXF3-206ENST00000494300 PRG4Q92954 1404 aaPredicted RBP9.72□□□□□ -0.85
NXF3-206ENST00000494300 CYB5RLQ6IPT4 315 aa9.71□□□□□ -0.86
NXF3-206ENST00000494300 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
NXF3-206ENST00000494300 CARMIL2Q6F5E8 1435 aa9.71□□□□□ -0.86
NXF3-206ENST00000494300 UBTFP17480 764 aaKnown RBP9.7□□□□□ -0.86
NXF3-206ENST00000494300 IQGAP2Q13576 1575 aa9.7□□□□□ -0.86
NXF3-206ENST00000494300 FARP1Q9Y4F1 1045 aaPredicted RBP9.69□□□□□ -0.86
NXF3-206ENST00000494300 TRIM26Q12899 539 aaPredicted RBP9.68□□□□□ -0.86
NXF3-206ENST00000494300 KIF21BO75037 1637 aa9.67□□□□□ -0.86
NXF3-206ENST00000494300 SHROOM2Q13796 1616 aa9.67□□□□□ -0.86
NXF3-206ENST00000494300 GOLGA3Q08378 1498 aa9.67□□□□□ -0.86
NXF3-206ENST00000494300 VASPP50552 380 aaPredicted RBP9.66□□□□□ -0.86
NXF3-206ENST00000494300 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
NXF3-206ENST00000494300 CTTNBP2Q8WZ74 1663 aa9.65□□□□□ -0.86
NXF3-206ENST00000494300 HAX1O00165 279 aa9.65□□□□□ -0.86
NXF3-206ENST00000494300 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
NXF3-206ENST00000494300 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
NXF3-206ENST00000494300 PTPRGP23470 1445 aa9.63□□□□□ -0.87
NXF3-206ENST00000494300 ERCC6L2Q5T890 1561 aa9.63□□□□□ -0.87
NXF3-206ENST00000494300 UGGT2Q9NYU1 1516 aa9.62□□□□□ -0.87
NXF3-206ENST00000494300 NPM1P06748 294 aaKnown RBP eCLIP9.62□□□□□ -0.87
NXF3-206ENST00000494300 HRCP23327 699 aa9.61□□□□□ -0.87
NXF3-206ENST00000494300 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
NXF3-206ENST00000494300 PKD2Q13563 968 aa9.6□□□□□ -0.87
NXF3-206ENST00000494300 PAXIP1Q6ZW49 1069 aaPredicted RBP9.6□□□□□ -0.87
NXF3-206ENST00000494300 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
NXF3-206ENST00000494300 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
NXF3-206ENST00000494300 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
NXF3-206ENST00000494300 KIAA0556O60303 1618 aa9.59□□□□□ -0.87
NXF3-206ENST00000494300 DISP1Q96F81 1524 aa9.58□□□□□ -0.88
NXF3-206ENST00000494300 NBR1Q14596 966 aa9.57□□□□□ -0.88
NXF3-206ENST00000494300 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
NXF3-206ENST00000494300 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
NXF3-206ENST00000494300 C19orf67A6NJJ6 358 aa9.55□□□□□ -0.88
NXF3-206ENST00000494300 UACAQ9BZF9 1416 aa9.55□□□□□ -0.88
NXF3-206ENST00000494300 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
NXF3-206ENST00000494300 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
NXF3-206ENST00000494300 FHOD3Q2V2M9 1422 aa9.52□□□□□ -0.89
NXF3-206ENST00000494300 SAMD9Q5K651 1589 aa9.52□□□□□ -0.89
NXF3-206ENST00000494300 PAK3O75914 559 aaPredicted RBP9.51□□□□□ -0.89
NXF3-206ENST00000494300 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
NXF3-206ENST00000494300 UHRF1BP1LA0JNW5 1464 aa9.51□□□□□ -0.89
NXF3-206ENST00000494300 ABCC2Q92887 1545 aa9.51□□□□□ -0.89
NXF3-206ENST00000494300 CLIP1P30622 1438 aa9.5□□□□□ -0.89
NXF3-206ENST00000494300 FMN1Q68DA7 1419 aa9.5□□□□□ -0.89
NXF3-206ENST00000494300 EVX2Q03828 476 aa9.5□□□□□ -0.89
NXF3-206ENST00000494300 IFNLR1Q8IU57 520 aaPredicted RBP9.5□□□□□ -0.89
NXF3-206ENST00000494300 ADCY10Q96PN6 1610 aa9.49□□□□□ -0.89
NXF3-206ENST00000494300 PLB1Q6P1J6 1458 aa9.49□□□□□ -0.89
NXF3-206ENST00000494300 LOC105371045A0A1W2PR82 267 aa9.49□□□□□ -0.89
NXF3-206ENST00000494300 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
NXF3-206ENST00000494300 ZRANB1Q9UGI0 708 aa9.48□□□□□ -0.89
NXF3-206ENST00000494300 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
NXF3-206ENST00000494300 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
NXF3-206ENST00000494300 CEP162Q5TB80 1403 aa9.47□□□□□ -0.89
NXF3-206ENST00000494300 ABCA8O94911 1581 aa9.46□□□□□ -0.89
NXF3-206ENST00000494300 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
NXF3-206ENST00000494300 RASEFQ8IZ41 740 aa9.45□□□□□ -0.9
NXF3-206ENST00000494300 SP7Q8TDD2 431 aaPredicted RBP9.45□□□□□ -0.9
NXF3-206ENST00000494300 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
NXF3-206ENST00000494300 KDM5BQ9UGL1 1544 aa9.45□□□□□ -0.9
NXF3-206ENST00000494300 NUBP1P53384 320 aa9.44□□□□□ -0.9
NXF3-206ENST00000494300 FAM69CQ0P6D2 419 aa9.44□□□□□ -0.9
NXF3-206ENST00000494300 ASXL2Q76L83 1435 aa9.44□□□□□ -0.9
NXF3-206ENST00000494300 SPOCK2Q92563 424 aa9.43□□□□□ -0.9
NXF3-206ENST00000494300 CDK11AQ9UQ88 783 aaPredicted RBP9.43□□□□□ -0.9
NXF3-206ENST00000494300 ZCCHC11Q5TAX3 1644 aaKnown RBP9.42□□□□□ -0.9
NXF3-206ENST00000494300 PLEKHD1A6NEE1 506 aa9.42□□□□□ -0.9
NXF3-206ENST00000494300 EIF5BO60841 1220 aaKnown RBP9.42□□□□□ -0.9
NXF3-206ENST00000494300 FAM212AQ96EL1 285 aa9.42□□□□□ -0.9
NXF3-206ENST00000494300 HECW1Q76N89 1606 aa9.42□□□□□ -0.9
NXF3-206ENST00000494300 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
NXF3-206ENST00000494300 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.9
NXF3-206ENST00000494300 ABCC10Q5T3U5 1492 aa9.4□□□□□ -0.9
NXF3-206ENST00000494300 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
NXF3-206ENST00000494300 SPRYD3Q8NCJ5 442 aa9.4□□□□□ -0.9
NXF3-206ENST00000494300 ATP10BO94823 1461 aa9.4□□□□□ -0.91
NXF3-206ENST00000494300 CASKIN1Q8WXD9 1431 aa9.39□□□□□ -0.91
NXF3-206ENST00000494300 DCAF8Q5TAQ9 597 aa9.39□□□□□ -0.91
NXF3-206ENST00000494300 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
NXF3-206ENST00000494300 FYCO1Q9BQS8 1478 aa9.39□□□□□ -0.91
NXF3-206ENST00000494300 CCDC18Q5T9S5 1454 aa9.38□□□□□ -0.91
NXF3-206ENST00000494300 EPRSP07814 1512 aaKnown RBP9.37□□□□□ -0.91
NXF3-206ENST00000494300 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
NXF3-206ENST00000494300 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
NXF3-206ENST00000494300 DIP2BQ9P265 1576 aa9.37□□□□□ -0.91
NXF3-206ENST00000494300 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
NXF3-206ENST00000494300 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
NXF3-206ENST00000494300 GLI2P10070 1586 aa9.34□□□□□ -0.91
NXF3-206ENST00000494300 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.91
NXF3-206ENST00000494300 GSE1Q14687 1217 aa9.34□□□□□ -0.91
NXF3-206ENST00000494300 CIZ1Q9ULV3 898 aaPredicted RBP9.34□□□□□ -0.91
NXF3-206ENST00000494300 TEX14Q8IWB6 1497 aa9.34□□□□□ -0.91
NXF3-206ENST00000494300 GABBR2O75899 941 aa9.33□□□□□ -0.92
NXF3-206ENST00000494300 CD109Q6YHK3 1445 aa9.32□□□□□ -0.92
NXF3-206ENST00000494300 CLCN6P51797 869 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms