RNA–Protein interactions for RNA: ENST00000493750.1

STRC-212, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-212ENST00000493750 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
STRC-212ENST00000493750 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
STRC-212ENST00000493750 ATP10AO60312 1499 aa13.22□□□□□ -0.29
STRC-212ENST00000493750 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
STRC-212ENST00000493750 SOCS7O14512 581 aa13.21□□□□□ -0.29
STRC-212ENST00000493750 AFAP1Q8N556 730 aa13.21□□□□□ -0.29
STRC-212ENST00000493750 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
STRC-212ENST00000493750 HECW1Q76N89 1606 aa13.21□□□□□ -0.3
STRC-212ENST00000493750 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
STRC-212ENST00000493750 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
STRC-212ENST00000493750 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
STRC-212ENST00000493750 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
STRC-212ENST00000493750 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
STRC-212ENST00000493750 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
STRC-212ENST00000493750 CFAP74Q9C0B2 1584 aa13.16□□□□□ -0.3
STRC-212ENST00000493750 EEA1Q15075 1411 aa13.14□□□□□ -0.31
STRC-212ENST00000493750 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
STRC-212ENST00000493750 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
STRC-212ENST00000493750 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
STRC-212ENST00000493750 FER1L4A9Z1Z3 1794 aa13.11□□□□□ -0.31
STRC-212ENST00000493750 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
STRC-212ENST00000493750 PTPRTO14522 1441 aa13.1□□□□□ -0.31
STRC-212ENST00000493750 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
STRC-212ENST00000493750 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
STRC-212ENST00000493750 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
STRC-212ENST00000493750 FMN1Q68DA7 1419 aa13.06□□□□□ -0.32
STRC-212ENST00000493750 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
STRC-212ENST00000493750 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
STRC-212ENST00000493750 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
STRC-212ENST00000493750 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
STRC-212ENST00000493750 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
STRC-212ENST00000493750 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
STRC-212ENST00000493750 KDM5CP41229 1560 aa13.03□□□□□ -0.32
STRC-212ENST00000493750 KIF14Q15058 1648 aa13.03□□□□□ -0.32
STRC-212ENST00000493750 LTBP4Q8N2S1 1624 aa13.03□□□□□ -0.32
STRC-212ENST00000493750 CLIP1P30622 1438 aa13.03□□□□□ -0.32
STRC-212ENST00000493750 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
STRC-212ENST00000493750 DIP2CQ9Y2E4 1556 aa13.03□□□□□ -0.32
STRC-212ENST00000493750 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
STRC-212ENST00000493750 ZNF335Q9H4Z2 1342 aaPredicted RBP13.01□□□□□ -0.33
STRC-212ENST00000493750 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
STRC-212ENST00000493750 ZMYM3Q14202 1370 aa13□□□□□ -0.33
STRC-212ENST00000493750 ZNF777Q9ULD5 760 aaPredicted RBP13□□□□□ -0.33
STRC-212ENST00000493750 AGLP35573 1532 aa12.99□□□□□ -0.33
STRC-212ENST00000493750 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
STRC-212ENST00000493750 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
STRC-212ENST00000493750 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
STRC-212ENST00000493750 MYO5CQ9NQX4 1742 aa12.98□□□□□ -0.33
STRC-212ENST00000493750 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
STRC-212ENST00000493750 HNRNPMP52272 730 aaKnown RBP eCLIP12.97□□□□□ -0.33
STRC-212ENST00000493750 ABCA6Q8N139 1617 aa12.97□□□□□ -0.33
STRC-212ENST00000493750 NPATQ14207 1427 aa12.96□□□□□ -0.34
STRC-212ENST00000493750 C3P01024 1663 aa12.96□□□□□ -0.34
STRC-212ENST00000493750 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
STRC-212ENST00000493750 CAMSAP1Q5T5Y3 1602 aa12.95□□□□□ -0.34
STRC-212ENST00000493750 ABCC1P33527 1531 aa12.94□□□□□ -0.34
STRC-212ENST00000493750 PKD2Q13563 968 aa12.94□□□□□ -0.34
STRC-212ENST00000493750 GGT6Q6P531 493 aa12.94□□□□□ -0.34
STRC-212ENST00000493750 CASKIN1Q8WXD9 1431 aa12.91□□□□□ -0.34
STRC-212ENST00000493750 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
STRC-212ENST00000493750 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
STRC-212ENST00000493750 HSPA1LP34931 641 aa12.9□□□□□ -0.34
STRC-212ENST00000493750 PIP4K2BP78356 416 aa12.9□□□□□ -0.34
STRC-212ENST00000493750 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
STRC-212ENST00000493750 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
STRC-212ENST00000493750 CFDP1Q9UEE9 299 aaPredicted RBP12.89□□□□□ -0.35
STRC-212ENST00000493750 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
STRC-212ENST00000493750 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
STRC-212ENST00000493750 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
STRC-212ENST00000493750 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
STRC-212ENST00000493750 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
STRC-212ENST00000493750 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
STRC-212ENST00000493750 CCDC18Q5T9S5 1454 aa12.87□□□□□ -0.35
STRC-212ENST00000493750 A2MP01023 1474 aa12.86□□□□□ -0.35
STRC-212ENST00000493750 FBXO31Q5XUX0 539 aaPredicted RBP12.86□□□□□ -0.35
STRC-212ENST00000493750 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
STRC-212ENST00000493750 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
STRC-212ENST00000493750 SYCP2Q9BX26 1530 aa12.85□□□□□ -0.35
STRC-212ENST00000493750 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
STRC-212ENST00000493750 TOM1O60784 492 aa12.84□□□□□ -0.35
STRC-212ENST00000493750 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
STRC-212ENST00000493750 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
STRC-212ENST00000493750 ATP7AQ04656 1500 aa12.82□□□□□ -0.36
STRC-212ENST00000493750 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
STRC-212ENST00000493750 MROH2AA6NES4 1674 aa12.8□□□□□ -0.36
STRC-212ENST00000493750 A2ML1A8K2U0 1454 aa12.8□□□□□ -0.36
STRC-212ENST00000493750 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
STRC-212ENST00000493750 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
STRC-212ENST00000493750 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
STRC-212ENST00000493750 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
STRC-212ENST00000493750 KIF3BO15066 747 aa12.79□□□□□ -0.36
STRC-212ENST00000493750 ANKLE2Q86XL3 938 aa12.79□□□□□ -0.36
STRC-212ENST00000493750 SENP3Q9H4L4 574 aaPredicted RBP12.79□□□□□ -0.36
STRC-212ENST00000493750 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
STRC-212ENST00000493750 TNRQ92752 1358 aa12.79□□□□□ -0.36
STRC-212ENST00000493750 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
STRC-212ENST00000493750 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
STRC-212ENST00000493750 MYO3AQ8NEV4 1616 aa12.78□□□□□ -0.36
STRC-212ENST00000493750 DHX29Q7Z478 1369 aaKnown RBP12.78□□□□□ -0.36
STRC-212ENST00000493750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms