RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
TCN2-207ENST00000493542 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
TCN2-207ENST00000493542 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
TCN2-207ENST00000493542 MAGI2Q86UL8 1455 aa15.52■□□□□ 0.07
TCN2-207ENST00000493542 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.07
TCN2-207ENST00000493542 SPATA31D1Q6ZQQ2 1576 aa15.5■□□□□ 0.07
TCN2-207ENST00000493542 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
TCN2-207ENST00000493542 HECW1Q76N89 1606 aa15.5■□□□□ 0.07
TCN2-207ENST00000493542 PREX1Q8TCU6 1659 aa15.48■□□□□ 0.07
TCN2-207ENST00000493542 SCAPERQ9BY12 1400 aa15.48■□□□□ 0.07
TCN2-207ENST00000493542 ARHGEF12Q9NZN5 1544 aa15.48■□□□□ 0.07
TCN2-207ENST00000493542 STRCQ7RTU9 1775 aa15.47■□□□□ 0.07
TCN2-207ENST00000493542 ATP10AO60312 1499 aa15.46■□□□□ 0.06
TCN2-207ENST00000493542 UHRF1BP1Q6BDS2 1440 aa15.44■□□□□ 0.06
TCN2-207ENST00000493542 LRRIQ1Q96JM4 1722 aa15.44■□□□□ 0.06
TCN2-207ENST00000493542 PLCH2O75038 1416 aa15.43■□□□□ 0.06
TCN2-207ENST00000493542 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
TCN2-207ENST00000493542 ARHGAP35Q9NRY4 1499 aa15.43■□□□□ 0.06
TCN2-207ENST00000493542 MYO5CQ9NQX4 1742 aa15.43■□□□□ 0.06
TCN2-207ENST00000493542 KIF14Q15058 1648 aa15.41■□□□□ 0.06
TCN2-207ENST00000493542 PTPRTO14522 1441 aa15.41■□□□□ 0.06
TCN2-207ENST00000493542 FMN1Q68DA7 1419 aa15.39■□□□□ 0.05
TCN2-207ENST00000493542 EFCAB2Q5VUJ9 269 aa15.38■□□□□ 0.05
TCN2-207ENST00000493542 LTBP4Q8N2S1 1624 aa15.37■□□□□ 0.05
TCN2-207ENST00000493542 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
TCN2-207ENST00000493542 AFAP1Q8N556 730 aa15.36■□□□□ 0.05
TCN2-207ENST00000493542 CDC42BPBQ9Y5S2 1711 aa15.34■□□□□ 0.05
TCN2-207ENST00000493542 KDM5CP41229 1560 aa15.34■□□□□ 0.05
TCN2-207ENST00000493542 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
TCN2-207ENST00000493542 IQSEC2Q5JU85 1478 aa15.33■□□□□ 0.05
TCN2-207ENST00000493542 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.05
TCN2-207ENST00000493542 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
TCN2-207ENST00000493542 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
TCN2-207ENST00000493542 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
TCN2-207ENST00000493542 ATP1B4Q9UN42 357 aaPredicted RBP15.32■□□□□ 0.04
TCN2-207ENST00000493542 ZNF518AQ6AHZ1 1483 aa15.32■□□□□ 0.04
TCN2-207ENST00000493542 TRAPPC8Q9Y2L5 1435 aa15.31■□□□□ 0.04
TCN2-207ENST00000493542 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
TCN2-207ENST00000493542 C3P01024 1663 aa15.3■□□□□ 0.04
TCN2-207ENST00000493542 NCOA1Q15788 1441 aa15.3■□□□□ 0.04
TCN2-207ENST00000493542 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
TCN2-207ENST00000493542 ARHGAP5Q13017 1502 aa15.29■□□□□ 0.04
TCN2-207ENST00000493542 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
TCN2-207ENST00000493542 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
TCN2-207ENST00000493542 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
TCN2-207ENST00000493542 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.04
TCN2-207ENST00000493542 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
TCN2-207ENST00000493542 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
TCN2-207ENST00000493542 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
TCN2-207ENST00000493542 NCKAP5LQ9HCH0 1330 aa15.26■□□□□ 0.03
TCN2-207ENST00000493542 ABCC1P33527 1531 aa15.26■□□□□ 0.03
TCN2-207ENST00000493542 CLIP1P30622 1438 aa15.26■□□□□ 0.03
TCN2-207ENST00000493542 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
TCN2-207ENST00000493542 CASKIN1Q8WXD9 1431 aa15.24■□□□□ 0.03
TCN2-207ENST00000493542 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
TCN2-207ENST00000493542 KIDINS220Q9ULH0 1771 aa15.23■□□□□ 0.03
TCN2-207ENST00000493542 AGLP35573 1532 aa15.22■□□□□ 0.03
TCN2-207ENST00000493542 CCDC18Q5T9S5 1454 aa15.22■□□□□ 0.03
TCN2-207ENST00000493542 CNTLNQ9NXG0 1405 aa15.21■□□□□ 0.03
TCN2-207ENST00000493542 NPATQ14207 1427 aa15.17■□□□□ 0.02
TCN2-207ENST00000493542 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
TCN2-207ENST00000493542 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
TCN2-207ENST00000493542 ZMYM3Q14202 1370 aa15.17■□□□□ 0.02
TCN2-207ENST00000493542 HSPA1LP34931 641 aa15.17■□□□□ 0.02
TCN2-207ENST00000493542 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
TCN2-207ENST00000493542 PKD2Q13563 968 aa15.16■□□□□ 0.02
TCN2-207ENST00000493542 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
TCN2-207ENST00000493542 MED1Q15648 1581 aaPredicted RBP15.14■□□□□ 0.01
TCN2-207ENST00000493542 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
TCN2-207ENST00000493542 MROH2AA6NES4 1674 aa15.12■□□□□ 0.01
TCN2-207ENST00000493542 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
TCN2-207ENST00000493542 GPATCH8Q9UKJ3 1502 aaKnown RBP15.12■□□□□ 0.01
TCN2-207ENST00000493542 PLA2R1Q13018 1463 aa15.11■□□□□ 0.01
TCN2-207ENST00000493542 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
TCN2-207ENST00000493542 SUPT6HQ7KZ85 1726 aaKnown RBP15.1■□□□□ 0.01
TCN2-207ENST00000493542 INO80Q9ULG1 1556 aaPredicted RBP15.1■□□□□ 0.01
TCN2-207ENST00000493542 TOM1O60784 492 aa15.09■□□□□ 0.01
TCN2-207ENST00000493542 ZNF777Q9ULD5 760 aaPredicted RBP15.09■□□□□ 0.01
TCN2-207ENST00000493542 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
TCN2-207ENST00000493542 CEP170BQ9Y4F5 1589 aaPredicted RBP15.08■□□□□ 0
TCN2-207ENST00000493542 MYO3AQ8NEV4 1616 aa15.08■□□□□ 0
TCN2-207ENST00000493542 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
TCN2-207ENST00000493542 PTPRKQ15262 1439 aa15.08■□□□□ 0
TCN2-207ENST00000493542 ATP7AQ04656 1500 aa15.07■□□□□ 0
TCN2-207ENST00000493542 GGT6Q6P531 493 aa15.07■□□□□ 0
TCN2-207ENST00000493542 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
TCN2-207ENST00000493542 ZNF142P52746 1687 aaPredicted RBP15.06■□□□□ 0
TCN2-207ENST00000493542 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
TCN2-207ENST00000493542 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
TCN2-207ENST00000493542 KIAA1107Q9UPP5 1409 aa15.06■□□□□ 0
TCN2-207ENST00000493542 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
TCN2-207ENST00000493542 TIAM1Q13009 1591 aa15.03■□□□□ -0
TCN2-207ENST00000493542 ADGBQ8N7X0 1667 aa15.03■□□□□ -0
TCN2-207ENST00000493542 PLEKHH2Q8IVE3 1493 aa15.02■□□□□ -0
TCN2-207ENST00000493542 A2MP01023 1474 aa15.01□□□□□ -0.01
TCN2-207ENST00000493542 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
TCN2-207ENST00000493542 CPS1P31327 1500 aa15.01□□□□□ -0.01
TCN2-207ENST00000493542 A2ML1A8K2U0 1454 aa15.01□□□□□ -0.01
TCN2-207ENST00000493542 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
TCN2-207ENST00000493542 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms