RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
KPNA1-209ENST00000493510 KDM5BQ9UGL1 1544 aa12.52□□□□□ -0.41
KPNA1-209ENST00000493510 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
KPNA1-209ENST00000493510 UACAQ9BZF9 1416 aa12.51□□□□□ -0.41
KPNA1-209ENST00000493510 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
KPNA1-209ENST00000493510 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
KPNA1-209ENST00000493510 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
KPNA1-209ENST00000493510 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
KPNA1-209ENST00000493510 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
KPNA1-209ENST00000493510 WDR7Q9Y4E6 1490 aa12.5□□□□□ -0.41
KPNA1-209ENST00000493510 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
KPNA1-209ENST00000493510 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
KPNA1-209ENST00000493510 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
KPNA1-209ENST00000493510 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
KPNA1-209ENST00000493510 CAPN15O75808 1086 aa12.46□□□□□ -0.41
KPNA1-209ENST00000493510 TTC37Q6PGP7 1564 aa12.45□□□□□ -0.42
KPNA1-209ENST00000493510 POLA2Q14181 598 aa12.45□□□□□ -0.42
KPNA1-209ENST00000493510 FANCAO15360 1455 aa12.45□□□□□ -0.42
KPNA1-209ENST00000493510 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
KPNA1-209ENST00000493510 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
KPNA1-209ENST00000493510 MLECQ14165 292 aa12.41□□□□□ -0.42
KPNA1-209ENST00000493510 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
KPNA1-209ENST00000493510 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
KPNA1-209ENST00000493510 CEBPAP49715 358 aaPredicted RBP12.4□□□□□ -0.42
KPNA1-209ENST00000493510 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
KPNA1-209ENST00000493510 WRNQ14191 1432 aaPredicted RBP eCLIP12.39□□□□□ -0.43
KPNA1-209ENST00000493510 C1QBPQ07021 282 aaKnown RBP12.39□□□□□ -0.43
KPNA1-209ENST00000493510 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
KPNA1-209ENST00000493510 SETD1AO15047 1707 aaKnown RBP12.36□□□□□ -0.43
KPNA1-209ENST00000493510 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
KPNA1-209ENST00000493510 AKNAQ7Z591 1439 aa12.35□□□□□ -0.43
KPNA1-209ENST00000493510 KIAA0556O60303 1618 aa12.33□□□□□ -0.43
KPNA1-209ENST00000493510 FER1L4A9Z1Z3 1794 aa12.33□□□□□ -0.44
KPNA1-209ENST00000493510 PROM2Q8N271 834 aa12.33□□□□□ -0.44
KPNA1-209ENST00000493510 PTPRKQ15262 1439 aa12.33□□□□□ -0.44
KPNA1-209ENST00000493510 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
KPNA1-209ENST00000493510 NEO1Q92859 1461 aa12.29□□□□□ -0.44
KPNA1-209ENST00000493510 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
KPNA1-209ENST00000493510 SETD1BQ9UPS6 1966 aaKnown RBP12.28□□□□□ -0.44
KPNA1-209ENST00000493510 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
KPNA1-209ENST00000493510 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
KPNA1-209ENST00000493510 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
KPNA1-209ENST00000493510 ABCB7O75027 752 aa12.26□□□□□ -0.45
KPNA1-209ENST00000493510 PKD2Q13563 968 aa12.25□□□□□ -0.45
KPNA1-209ENST00000493510 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
KPNA1-209ENST00000493510 CPS1P31327 1500 aa12.23□□□□□ -0.45
KPNA1-209ENST00000493510 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
KPNA1-209ENST00000493510 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
KPNA1-209ENST00000493510 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
KPNA1-209ENST00000493510 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.46
KPNA1-209ENST00000493510 TRIM52Q96A61 297 aa12.2□□□□□ -0.46
KPNA1-209ENST00000493510 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
KPNA1-209ENST00000493510 EFCAB5A4FU69 1503 aa12.18□□□□□ -0.46
KPNA1-209ENST00000493510 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
KPNA1-209ENST00000493510 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
KPNA1-209ENST00000493510 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
KPNA1-209ENST00000493510 ALKQ9UM73 1620 aa12.15□□□□□ -0.46
KPNA1-209ENST00000493510 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
KPNA1-209ENST00000493510 YY1P25490 414 aa12.13□□□□□ -0.47
KPNA1-209ENST00000493510 PLA2R1Q13018 1463 aa12.13□□□□□ -0.47
KPNA1-209ENST00000493510 SETBP1Q9Y6X0 1596 aa12.13□□□□□ -0.47
KPNA1-209ENST00000493510 SHANK2Q9UPX8 1470 aa12.12□□□□□ -0.47
KPNA1-209ENST00000493510 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
KPNA1-209ENST00000493510 DSG3P32926 999 aa12.11□□□□□ -0.47
KPNA1-209ENST00000493510 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
KPNA1-209ENST00000493510 ESF1Q9H501 851 aaKnown RBP12.11□□□□□ -0.47
KPNA1-209ENST00000493510 ABCA9Q8IUA7 1624 aa12.11□□□□□ -0.47
KPNA1-209ENST00000493510 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
KPNA1-209ENST00000493510 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
KPNA1-209ENST00000493510 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
KPNA1-209ENST00000493510 C9orf84Q5VXU9 1444 aa12.08□□□□□ -0.48
KPNA1-209ENST00000493510 RICTORQ6R327 1708 aa12.08□□□□□ -0.48
KPNA1-209ENST00000493510 ATP10AO60312 1499 aa12.08□□□□□ -0.48
KPNA1-209ENST00000493510 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.48
KPNA1-209ENST00000493510 RXRBP28702 533 aa12.07□□□□□ -0.48
KPNA1-209ENST00000493510 IQGAP2Q13576 1575 aa12.07□□□□□ -0.48
KPNA1-209ENST00000493510 LRRC7Q96NW7 1537 aa12.06□□□□□ -0.48
KPNA1-209ENST00000493510 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
KPNA1-209ENST00000493510 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
KPNA1-209ENST00000493510 C3P01024 1663 aa12.03□□□□□ -0.48
KPNA1-209ENST00000493510 NPATQ14207 1427 aa12.03□□□□□ -0.48
KPNA1-209ENST00000493510 IGF1RP08069 1367 aa12□□□□□ -0.49
KPNA1-209ENST00000493510 SLC34A2O95436 690 aa11.99□□□□□ -0.49
KPNA1-209ENST00000493510 HECW1Q76N89 1606 aa11.98□□□□□ -0.49
KPNA1-209ENST00000493510 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
KPNA1-209ENST00000493510 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
KPNA1-209ENST00000493510 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
KPNA1-209ENST00000493510 PCDH10Q9P2E7 1040 aa11.98□□□□□ -0.49
KPNA1-209ENST00000493510 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
KPNA1-209ENST00000493510 ABCA8O94911 1581 aa11.96□□□□□ -0.49
KPNA1-209ENST00000493510 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.49
KPNA1-209ENST00000493510 FAM135BQ49AJ0 1406 aa11.96□□□□□ -0.49
KPNA1-209ENST00000493510 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.49
KPNA1-209ENST00000493510 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.5
KPNA1-209ENST00000493510 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
KPNA1-209ENST00000493510 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
KPNA1-209ENST00000493510 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
KPNA1-209ENST00000493510 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
KPNA1-209ENST00000493510 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
KPNA1-209ENST00000493510 LRP5O75197 1615 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms