RNA–Protein interactions for RNA: ENST00000492372.1

DKC1-212, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-212ENST00000492372 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
DKC1-212ENST00000492372 MAGI2Q86UL8 1455 aa15.79■□□□□ 0.12
DKC1-212ENST00000492372 UBAP1LF5GYI3 381 aa15.78■□□□□ 0.12
DKC1-212ENST00000492372 C3P01024 1663 aa15.76■□□□□ 0.11
DKC1-212ENST00000492372 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
DKC1-212ENST00000492372 NCOA1Q15788 1441 aa15.73■□□□□ 0.11
DKC1-212ENST00000492372 ATP10AO60312 1499 aa15.71■□□□□ 0.11
DKC1-212ENST00000492372 C9orf84Q5VXU9 1444 aa15.71■□□□□ 0.11
DKC1-212ENST00000492372 HSPA1LP34931 641 aa15.68■□□□□ 0.1
DKC1-212ENST00000492372 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
DKC1-212ENST00000492372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.1
DKC1-212ENST00000492372 CAMSAP1Q5T5Y3 1602 aa15.67■□□□□ 0.1
DKC1-212ENST00000492372 ZNF335Q9H4Z2 1342 aaPredicted RBP15.67■□□□□ 0.1
DKC1-212ENST00000492372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
DKC1-212ENST00000492372 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
DKC1-212ENST00000492372 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
DKC1-212ENST00000492372 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
DKC1-212ENST00000492372 NUP153P49790 1475 aaKnown RBP15.63■□□□□ 0.09
DKC1-212ENST00000492372 SCAPERQ9BY12 1400 aa15.62■□□□□ 0.09
DKC1-212ENST00000492372 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
DKC1-212ENST00000492372 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
DKC1-212ENST00000492372 SAMD9Q5K651 1589 aa15.61■□□□□ 0.09
DKC1-212ENST00000492372 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
DKC1-212ENST00000492372 PIP4K2BP78356 416 aa15.57■□□□□ 0.08
DKC1-212ENST00000492372 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
DKC1-212ENST00000492372 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
DKC1-212ENST00000492372 DIP2CQ9Y2E4 1556 aa15.57■□□□□ 0.08
DKC1-212ENST00000492372 PLEKHD1A6NEE1 506 aa15.56■□□□□ 0.08
DKC1-212ENST00000492372 ZNF142P52746 1687 aaPredicted RBP15.56■□□□□ 0.08
DKC1-212ENST00000492372 MYO5CQ9NQX4 1742 aa15.55■□□□□ 0.08
DKC1-212ENST00000492372 KDM5CP41229 1560 aa15.53■□□□□ 0.08
DKC1-212ENST00000492372 MROH2AA6NES4 1674 aa15.53■□□□□ 0.08
DKC1-212ENST00000492372 ABCA6Q8N139 1617 aa15.53■□□□□ 0.08
DKC1-212ENST00000492372 AGLP35573 1532 aa15.53■□□□□ 0.08
DKC1-212ENST00000492372 TOM1O60784 492 aa15.52■□□□□ 0.08
DKC1-212ENST00000492372 PLA2R1Q13018 1463 aa15.52■□□□□ 0.07
DKC1-212ENST00000492372 PLCH2O75038 1416 aa15.51■□□□□ 0.07
DKC1-212ENST00000492372 TCOF1Q13428 1488 aaKnown RBP15.51■□□□□ 0.07
DKC1-212ENST00000492372 ZNF518AQ6AHZ1 1483 aa15.51■□□□□ 0.07
DKC1-212ENST00000492372 MYO3AQ8NEV4 1616 aa15.5■□□□□ 0.07
DKC1-212ENST00000492372 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
DKC1-212ENST00000492372 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
DKC1-212ENST00000492372 NPATQ14207 1427 aa15.5■□□□□ 0.07
DKC1-212ENST00000492372 PKD2Q13563 968 aa15.49■□□□□ 0.07
DKC1-212ENST00000492372 ALKQ9UM73 1620 aa15.48■□□□□ 0.07
DKC1-212ENST00000492372 CNTLNQ9NXG0 1405 aa15.48■□□□□ 0.07
DKC1-212ENST00000492372 CPS1P31327 1500 aa15.48■□□□□ 0.07
DKC1-212ENST00000492372 RGS17Q9UGC6 210 aaPredicted RBP15.47■□□□□ 0.07
DKC1-212ENST00000492372 CEP170BQ9Y4F5 1589 aaPredicted RBP15.46■□□□□ 0.07
DKC1-212ENST00000492372 POLR1AO95602 1720 aaPredicted RBP15.46■□□□□ 0.06
DKC1-212ENST00000492372 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
DKC1-212ENST00000492372 SETD1AO15047 1707 aaKnown RBP15.43■□□□□ 0.06
DKC1-212ENST00000492372 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
DKC1-212ENST00000492372 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
DKC1-212ENST00000492372 PTPRKQ15262 1439 aa15.42■□□□□ 0.06
DKC1-212ENST00000492372 MYT1LQ9UL68 1186 aa15.41■□□□□ 0.06
DKC1-212ENST00000492372 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
DKC1-212ENST00000492372 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
DKC1-212ENST00000492372 CLTCQ00610 1675 aaKnown RBP15.4■□□□□ 0.06
DKC1-212ENST00000492372 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
DKC1-212ENST00000492372 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
DKC1-212ENST00000492372 ZMYM3Q14202 1370 aa15.37■□□□□ 0.05
DKC1-212ENST00000492372 NEURL4Q96JN8 1562 aa15.37■□□□□ 0.05
DKC1-212ENST00000492372 ARHGAP5Q13017 1502 aa15.37■□□□□ 0.05
DKC1-212ENST00000492372 KIF14Q15058 1648 aa15.36■□□□□ 0.05
DKC1-212ENST00000492372 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
DKC1-212ENST00000492372 CDC42BPBQ9Y5S2 1711 aa15.36■□□□□ 0.05
DKC1-212ENST00000492372 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
DKC1-212ENST00000492372 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
DKC1-212ENST00000492372 VWDEQ8N2E2 1590 aa15.35■□□□□ 0.05
DKC1-212ENST00000492372 POTEAQ6S8J7 498 aa15.34■□□□□ 0.05
DKC1-212ENST00000492372 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
DKC1-212ENST00000492372 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
DKC1-212ENST00000492372 A2ML1A8K2U0 1454 aa15.3■□□□□ 0.04
DKC1-212ENST00000492372 SRCAPQ6ZRS2 3230 aa15.3■□□□□ 0.04
DKC1-212ENST00000492372 ABCC1P33527 1531 aa15.29■□□□□ 0.04
DKC1-212ENST00000492372 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
DKC1-212ENST00000492372 SYNMO15061 1565 aa15.26■□□□□ 0.03
DKC1-212ENST00000492372 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
DKC1-212ENST00000492372 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
DKC1-212ENST00000492372 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
DKC1-212ENST00000492372 XIRP1Q702N8 1843 aaKnown RBP15.22■□□□□ 0.03
DKC1-212ENST00000492372 DEPDC5O75140 1603 aa15.21■□□□□ 0.03
DKC1-212ENST00000492372 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
DKC1-212ENST00000492372 SAMD9LQ8IVG5 1584 aa15.21■□□□□ 0.03
DKC1-212ENST00000492372 TROQ12816 1431 aaPredicted RBP15.19■□□□□ 0.02
DKC1-212ENST00000492372 UPF1Q92900 1129 aaKnown RBP eCLIP15.19■□□□□ 0.02
DKC1-212ENST00000492372 MED14O60244 1454 aa15.19■□□□□ 0.02
DKC1-212ENST00000492372 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
DKC1-212ENST00000492372 LRRIQ1Q96JM4 1722 aa15.18■□□□□ 0.02
DKC1-212ENST00000492372 NPHP4O75161 1426 aaPredicted RBP15.17■□□□□ 0.02
DKC1-212ENST00000492372 ANKLE2Q86XL3 938 aa15.16■□□□□ 0.02
DKC1-212ENST00000492372 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
DKC1-212ENST00000492372 CLIP1P30622 1438 aa15.16■□□□□ 0.02
DKC1-212ENST00000492372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
DKC1-212ENST00000492372 ATP7AQ04656 1500 aa15.14■□□□□ 0.01
DKC1-212ENST00000492372 INO80Q9ULG1 1556 aaPredicted RBP15.13■□□□□ 0.01
DKC1-212ENST00000492372 A2MP01023 1474 aa15.13■□□□□ 0.01
DKC1-212ENST00000492372 GGT6Q6P531 493 aa15.12■□□□□ 0.01
DKC1-212ENST00000492372 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms