RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 FAM43AQ8N2R8 423 aa8.6□□□□□ -1.03
CCDC6-202ENST00000491922 BACH2Q9BYV9 841 aa8.59□□□□□ -1.03
CCDC6-202ENST00000491922 FGD6Q6ZV73 1430 aa8.58□□□□□ -1.04
CCDC6-202ENST00000491922 GLIPR1L2Q4G1C9 344 aa8.58□□□□□ -1.04
CCDC6-202ENST00000491922 FYCO1Q9BQS8 1478 aa8.58□□□□□ -1.04
CCDC6-202ENST00000491922 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
CCDC6-202ENST00000491922 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
CCDC6-202ENST00000491922 NAIPQ13075 1403 aa8.56□□□□□ -1.04
CCDC6-202ENST00000491922 NFKBIBQ15653 356 aa8.56□□□□□ -1.04
CCDC6-202ENST00000491922 FRAT1Q92837 279 aaPredicted RBP8.56□□□□□ -1.04
CCDC6-202ENST00000491922 AQRO60306 1485 aaKnown RBP eCLIP8.56□□□□□ -1.045e-6■■□□□ 14.3
CCDC6-202ENST00000491922 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
CCDC6-202ENST00000491922 GCC2Q8IWJ2 1684 aa8.54□□□□□ -1.04
CCDC6-202ENST00000491922 PTPRKQ15262 1439 aa8.54□□□□□ -1.04
CCDC6-202ENST00000491922 RRP1P56182 461 aaKnown RBP8.53□□□□□ -1.04
CCDC6-202ENST00000491922 EFCAB5A4FU69 1503 aa8.53□□□□□ -1.04
CCDC6-202ENST00000491922 NESP48681 1621 aa8.52□□□□□ -1.05
CCDC6-202ENST00000491922 KIF7Q2M1P5 1343 aa8.52□□□□□ -1.05
CCDC6-202ENST00000491922 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
CCDC6-202ENST00000491922 IGF1RP08069 1367 aa8.52□□□□□ -1.05
CCDC6-202ENST00000491922 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
CCDC6-202ENST00000491922 EXOC6Q8TAG9 804 aa8.5□□□□□ -1.05
CCDC6-202ENST00000491922 DHX29Q7Z478 1369 aaKnown RBP8.5□□□□□ -1.05
CCDC6-202ENST00000491922 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
CCDC6-202ENST00000491922 HMGXB3Q12766 1538 aa8.5□□□□□ -1.05
CCDC6-202ENST00000491922 CARMIL1Q5VZK9 1371 aa8.5□□□□□ -1.05
CCDC6-202ENST00000491922 DENND4BO75064 1496 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-202ENST00000491922 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
CCDC6-202ENST00000491922 MIA2Q96PC5 1412 aa8.49□□□□□ -1.05
CCDC6-202ENST00000491922 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-202ENST00000491922 MYOM3Q5VTT5 1437 aa8.48□□□□□ -1.05
CCDC6-202ENST00000491922 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
CCDC6-202ENST00000491922 L3MBTL2Q969R5 705 aa8.48□□□□□ -1.05
CCDC6-202ENST00000491922 FHOD3Q2V2M9 1422 aa8.47□□□□□ -1.05
CCDC6-202ENST00000491922 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
CCDC6-202ENST00000491922 LRPPRCP42704 1394 aaKnown RBP8.47□□□□□ -1.05
CCDC6-202ENST00000491922 RCAN3Q9UKA8 241 aa8.47□□□□□ -1.05
CCDC6-202ENST00000491922 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
CCDC6-202ENST00000491922 MTUS2Q5JR59 1369 aa8.46□□□□□ -1.05
CCDC6-202ENST00000491922 DCAF11Q8TEB1 546 aa8.46□□□□□ -1.05
CCDC6-202ENST00000491922 RPRD2Q5VT52 1461 aaKnown RBP8.46□□□□□ -1.06
CCDC6-202ENST00000491922 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.06
CCDC6-202ENST00000491922 ARID4BQ4LE39 1312 aaPredicted RBP8.46□□□□□ -1.06
CCDC6-202ENST00000491922 RIMBP3CA6NJZ7 1639 aa8.46□□□□□ -1.06
CCDC6-202ENST00000491922 RIMBP3BA6NNM3 1639 aa8.46□□□□□ -1.06
CCDC6-202ENST00000491922 RIMBP3Q9UFD9 1639 aa8.46□□□□□ -1.06
CCDC6-202ENST00000491922 PDE3BQ13370 1112 aa8.45□□□□□ -1.06
CCDC6-202ENST00000491922 POTEDQ86YR6 584 aa8.45□□□□□ -1.06
CCDC6-202ENST00000491922 TMC1Q8TDI8 760 aa8.45□□□□□ -1.06
CCDC6-202ENST00000491922 PDS5BQ9NTI5 1447 aa8.45□□□□□ -1.06
CCDC6-202ENST00000491922 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
CCDC6-202ENST00000491922 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
CCDC6-202ENST00000491922 SNAPC4Q5SXM2 1469 aa8.44□□□□□ -1.06
CCDC6-202ENST00000491922 FRAT2O75474 233 aaPredicted RBP8.44□□□□□ -1.06
CCDC6-202ENST00000491922 L1TD1Q5T7N2 865 aaKnown RBP8.44□□□□□ -1.06
CCDC6-202ENST00000491922 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
CCDC6-202ENST00000491922 EHBP1L1Q8N3D4 1523 aa8.44□□□□□ -1.06
CCDC6-202ENST00000491922 CTTNBP2Q8WZ74 1663 aa8.44□□□□□ -1.06
CCDC6-202ENST00000491922 RRP9O43818 475 aaKnown RBP8.44□□□□□ -1.06
CCDC6-202ENST00000491922 NBPF8Q3BBV2 869 aa8.44□□□□□ -1.06
CCDC6-202ENST00000491922 P3H3Q8IVL6 736 aa8.44□□□□□ -1.06
CCDC6-202ENST00000491922 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
CCDC6-202ENST00000491922 BRD4O60885 1362 aaPredicted RBP8.44□□□□□ -1.06
CCDC6-202ENST00000491922 CFTRP13569 1480 aa8.43□□□□□ -1.06
CCDC6-202ENST00000491922 TCOF1Q13428 1488 aaKnown RBP8.43□□□□□ -1.06
CCDC6-202ENST00000491922 MPHOSPH9Q99550 1183 aa8.43□□□□□ -1.06
CCDC6-202ENST00000491922 BCORL1Q5H9F3 1711 aa8.43□□□□□ -1.06
CCDC6-202ENST00000491922 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
CCDC6-202ENST00000491922 KIF21AQ7Z4S6 1674 aa8.43□□□□□ -1.06
CCDC6-202ENST00000491922 LRRIQ1Q96JM4 1722 aa8.42□□□□□ -1.06
CCDC6-202ENST00000491922 RRAGDQ9NQL2 400 aaPredicted RBP8.42□□□□□ -1.06
CCDC6-202ENST00000491922 KDM6BO15054 1643 aa8.42□□□□□ -1.06
CCDC6-202ENST00000491922 WDR62O43379 1518 aa8.42□□□□□ -1.06
CCDC6-202ENST00000491922 UGGT2Q9NYU1 1516 aa8.42□□□□□ -1.06
CCDC6-202ENST00000491922 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
CCDC6-202ENST00000491922 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
CCDC6-202ENST00000491922 KIF15Q9NS87 1388 aa8.41□□□□□ -1.06
CCDC6-202ENST00000491922 HSP90AA2PQ14568 343 aaPredicted RBP8.41□□□□□ -1.06
CCDC6-202ENST00000491922 ARHGEF11O15085 1522 aa8.41□□□□□ -1.06
CCDC6-202ENST00000491922 MRC2Q9UBG0 1479 aa8.41□□□□□ -1.06
CCDC6-202ENST00000491922 HSP90AA1P07900 732 aaKnown RBP8.4□□□□□ -1.06
CCDC6-202ENST00000491922 RRP7BPQ9NSQ0 103 aa8.4□□□□□ -1.06
CCDC6-202ENST00000491922 MYBBP1AQ9BQG0 1328 aaKnown RBP8.4□□□□□ -1.06
CCDC6-202ENST00000491922 KIF14Q15058 1648 aa8.4□□□□□ -1.07
CCDC6-202ENST00000491922 KDM5CP41229 1560 aa8.39□□□□□ -1.07
CCDC6-202ENST00000491922 RALBP1Q15311 655 aa8.39□□□□□ -1.07
CCDC6-202ENST00000491922 VIRMAQ69YN4 1812 aaKnown RBP8.39□□□□□ -1.07
CCDC6-202ENST00000491922 USP47Q96K76 1375 aa8.39□□□□□ -1.07
CCDC6-202ENST00000491922 KDM2BQ8NHM5 1336 aa8.39□□□□□ -1.07
CCDC6-202ENST00000491922 CENPQQ7L2Z9 268 aaPredicted RBP8.39□□□□□ -1.07
CCDC6-202ENST00000491922 NAP1L5Q96NT1 182 aaPredicted RBP8.39□□□□□ -1.07
CCDC6-202ENST00000491922 PNNQ9H307 717 aaKnown RBP8.39□□□□□ -1.07
CCDC6-202ENST00000491922 C8orf34Q49A92 452 aa8.38□□□□□ -1.07
CCDC6-202ENST00000491922 CRBNQ96SW2 442 aa8.38□□□□□ -1.07
CCDC6-202ENST00000491922 GRIN2BQ13224 1484 aa8.38□□□□□ -1.07
CCDC6-202ENST00000491922 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
CCDC6-202ENST00000491922 CLCN1P35523 988 aa8.38□□□□□ -1.07
CCDC6-202ENST00000491922 ZMYM4Q5VZL5 1548 aa8.38□□□□□ -1.07
CCDC6-202ENST00000491922 CUL7Q14999 1698 aa8.37□□□□□ -1.07
CCDC6-202ENST00000491922 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms