RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0
VPS72-205ENST00000491094 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
VPS72-205ENST00000491094 RGL3Q3MIN7 710 aa15.07■□□□□ 0
VPS72-205ENST00000491094 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
VPS72-205ENST00000491094 GRIN2BQ13224 1484 aa15.06■□□□□ 0
VPS72-205ENST00000491094 MAGI3Q5TCQ9 1506 aa15.05■□□□□ 0
VPS72-205ENST00000491094 KDM6BO15054 1643 aa15.04■□□□□ -0
VPS72-205ENST00000491094 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
VPS72-205ENST00000491094 DCAF11Q8TEB1 546 aa15.03■□□□□ -0
VPS72-205ENST00000491094 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
VPS72-205ENST00000491094 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
VPS72-205ENST00000491094 ERICH6BQ5W0A0 696 aa15.03■□□□□ -0
VPS72-205ENST00000491094 NUDCQ9Y266 331 aa15.03■□□□□ -0
VPS72-205ENST00000491094 ANP32AP39687 249 aaKnown RBP15.02■□□□□ -0
VPS72-205ENST00000491094 DENND4BO75064 1496 aaPredicted RBP15.02■□□□□ -0
VPS72-205ENST00000491094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02□□□□□ -0.016e-7■■■■□ 25.4
VPS72-205ENST00000491094 SUPT6HQ7KZ85 1726 aaKnown RBP15.02□□□□□ -0.01
VPS72-205ENST00000491094 ST20-MTHFSA0A0A6YYL1 179 aa15.02□□□□□ -0.01
VPS72-205ENST00000491094 NCOA1Q15788 1441 aa15.02□□□□□ -0.01
VPS72-205ENST00000491094 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
VPS72-205ENST00000491094 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
VPS72-205ENST00000491094 EPRSP07814 1512 aaKnown RBP15□□□□□ -0.01
VPS72-205ENST00000491094 USP47Q96K76 1375 aa15□□□□□ -0.01
VPS72-205ENST00000491094 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
VPS72-205ENST00000491094 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
VPS72-205ENST00000491094 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
VPS72-205ENST00000491094 CUL7Q14999 1698 aa14.98□□□□□ -0.01
VPS72-205ENST00000491094 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
VPS72-205ENST00000491094 RTL5Q5HYW3 569 aaPredicted RBP14.97□□□□□ -0.01
VPS72-205ENST00000491094 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
VPS72-205ENST00000491094 ABCC5O15440 1437 aa14.96□□□□□ -0.01
VPS72-205ENST00000491094 NUP155O75694 1391 aa14.96□□□□□ -0.01
VPS72-205ENST00000491094 TSPY4P0CV99 314 aa14.96□□□□□ -0.02
VPS72-205ENST00000491094 TSPY10P0CW01 314 aa14.96□□□□□ -0.02
VPS72-205ENST00000491094 PRDM2Q13029 1718 aa14.96□□□□□ -0.02
VPS72-205ENST00000491094 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.02
VPS72-205ENST00000491094 DAPK1P53355 1430 aa14.95□□□□□ -0.02
VPS72-205ENST00000491094 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
VPS72-205ENST00000491094 HNRNPMP52272 730 aaKnown RBP eCLIP14.95□□□□□ -0.02
VPS72-205ENST00000491094 THOC2Q8NI27 1593 aaKnown RBP14.95□□□□□ -0.02
VPS72-205ENST00000491094 PNISRQ8TF01 805 aaKnown RBP14.95□□□□□ -0.02
VPS72-205ENST00000491094 PLIN1O60240 522 aa14.94□□□□□ -0.02
VPS72-205ENST00000491094 SKAP1Q86WV1 359 aa14.94□□□□□ -0.02
VPS72-205ENST00000491094 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
VPS72-205ENST00000491094 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
VPS72-205ENST00000491094 PLEKHD1A6NEE1 506 aa14.92□□□□□ -0.02
VPS72-205ENST00000491094 MIA2Q96PC5 1412 aa14.92□□□□□ -0.02
VPS72-205ENST00000491094 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
VPS72-205ENST00000491094 LRRIQ1Q96JM4 1722 aa14.91□□□□□ -0.02
VPS72-205ENST00000491094 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
VPS72-205ENST00000491094 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
VPS72-205ENST00000491094 IPO9Q96P70 1041 aaKnown RBP14.88□□□□□ -0.03
VPS72-205ENST00000491094 TCOF1Q13428 1488 aaKnown RBP14.88□□□□□ -0.03
VPS72-205ENST00000491094 NBPF1Q3BBV0 1214 aa14.87□□□□□ -0.03
VPS72-205ENST00000491094 DHX29Q7Z478 1369 aaKnown RBP14.87□□□□□ -0.03
VPS72-205ENST00000491094 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
VPS72-205ENST00000491094 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
VPS72-205ENST00000491094 SMG6Q86US8 1419 aaKnown RBP14.86□□□□□ -0.03
VPS72-205ENST00000491094 HECW1Q76N89 1606 aa14.85□□□□□ -0.03
VPS72-205ENST00000491094 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
VPS72-205ENST00000491094 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
VPS72-205ENST00000491094 TEX14Q8IWB6 1497 aa14.84□□□□□ -0.03
VPS72-205ENST00000491094 RRP1P56182 461 aaKnown RBP14.84□□□□□ -0.03
VPS72-205ENST00000491094 JPH4Q96JJ6 628 aa14.84□□□□□ -0.03
VPS72-205ENST00000491094 ZNF608Q9ULD9 1512 aaPredicted RBP14.84□□□□□ -0.03
VPS72-205ENST00000491094 ROCK2O75116 1388 aaKnown RBP14.84□□□□□ -0.03
VPS72-205ENST00000491094 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
VPS72-205ENST00000491094 ROCK1Q13464 1354 aa14.83□□□□□ -0.04
VPS72-205ENST00000491094 ANKRD50Q9ULJ7 1429 aa14.82□□□□□ -0.04
VPS72-205ENST00000491094 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
VPS72-205ENST00000491094 KIAA1107Q9UPP5 1409 aa14.82□□□□□ -0.04
VPS72-205ENST00000491094 MYBBP1AQ9BQG0 1328 aaKnown RBP14.82□□□□□ -0.04
VPS72-205ENST00000491094 PLB1Q6P1J6 1458 aa14.81□□□□□ -0.04
VPS72-205ENST00000491094 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
VPS72-205ENST00000491094 KIF15Q9NS87 1388 aa14.81□□□□□ -0.04
VPS72-205ENST00000491094 PDE4AP27815 886 aa14.8□□□□□ -0.04
VPS72-205ENST00000491094 SLC4A3P48751 1232 aa14.8□□□□□ -0.04
VPS72-205ENST00000491094 RALBP1Q15311 655 aa14.79□□□□□ -0.04
VPS72-205ENST00000491094 NEFMP07197 916 aa14.79□□□□□ -0.04
VPS72-205ENST00000491094 PZPP20742 1482 aa14.79□□□□□ -0.04
VPS72-205ENST00000491094 PANK3Q9H999 370 aa14.79□□□□□ -0.04
VPS72-205ENST00000491094 NUP153P49790 1475 aaKnown RBP14.79□□□□□ -0.04
VPS72-205ENST00000491094 NLRP13Q86W25 1043 aa14.78□□□□□ -0.04
VPS72-205ENST00000491094 MYT1LQ9UL68 1186 aa14.77□□□□□ -0.04
VPS72-205ENST00000491094 CRBNQ96SW2 442 aa14.77□□□□□ -0.05
VPS72-205ENST00000491094 WDR62O43379 1518 aa14.76□□□□□ -0.05
VPS72-205ENST00000491094 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
VPS72-205ENST00000491094 KTN1Q86UP2 1357 aaKnown RBP14.76□□□□□ -0.05
VPS72-205ENST00000491094 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
VPS72-205ENST00000491094 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
VPS72-205ENST00000491094 GCC2Q8IWJ2 1684 aa14.75□□□□□ -0.05
VPS72-205ENST00000491094 RGS3P49796 1198 aa14.73□□□□□ -0.05
VPS72-205ENST00000491094 C20orf194Q5TEA3 1177 aa14.73□□□□□ -0.05
VPS72-205ENST00000491094 GPATCH8Q9UKJ3 1502 aaKnown RBP14.73□□□□□ -0.05
VPS72-205ENST00000491094 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
VPS72-205ENST00000491094 TCERG1O14776 1098 aaKnown RBP14.72□□□□□ -0.05
VPS72-205ENST00000491094 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.05
VPS72-205ENST00000491094 WDR43Q15061 677 aaKnown RBP eCLIP14.71□□□□□ -0.05
VPS72-205ENST00000491094 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
VPS72-205ENST00000491094 BRD4O60885 1362 aaPredicted RBP14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms