RNA–Protein interactions for RNA: ENST00000490137.1

PTPN18-214, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-214ENST00000490137 ARHGEF40Q8TER5 1519 aa10.87□□□□□ -0.67
PTPN18-214ENST00000490137 FANCAO15360 1455 aa10.87□□□□□ -0.67
PTPN18-214ENST00000490137 FRMPD1Q5SYB0 1578 aa10.86□□□□□ -0.67
PTPN18-214ENST00000490137 TTC37Q6PGP7 1564 aa10.86□□□□□ -0.67
PTPN18-214ENST00000490137 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
PTPN18-214ENST00000490137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.67
PTPN18-214ENST00000490137 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
PTPN18-214ENST00000490137 RAPGEF2Q9Y4G8 1499 aa10.84□□□□□ -0.67
PTPN18-214ENST00000490137 RAPGEF3O95398 923 aa10.83□□□□□ -0.68
PTPN18-214ENST00000490137 PTPRTO14522 1441 aa10.83□□□□□ -0.68
PTPN18-214ENST00000490137 MAGI2Q86UL8 1455 aa10.82□□□□□ -0.68
PTPN18-214ENST00000490137 AKNAQ7Z591 1439 aa10.82□□□□□ -0.68
PTPN18-214ENST00000490137 SETD1BQ9UPS6 1966 aaKnown RBP10.81□□□□□ -0.68
PTPN18-214ENST00000490137 ZMYM4Q5VZL5 1548 aa10.81□□□□□ -0.68
PTPN18-214ENST00000490137 FHOD3Q2V2M9 1422 aa10.81□□□□□ -0.68
PTPN18-214ENST00000490137 FER1L4A9Z1Z3 1794 aa10.8□□□□□ -0.68
PTPN18-214ENST00000490137 STRCQ7RTU9 1775 aa10.8□□□□□ -0.68
PTPN18-214ENST00000490137 RICTORQ6R327 1708 aa10.8□□□□□ -0.68
PTPN18-214ENST00000490137 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
PTPN18-214ENST00000490137 CTTNBP2Q8WZ74 1663 aa10.79□□□□□ -0.68
PTPN18-214ENST00000490137 EFCAB5A4FU69 1503 aa10.79□□□□□ -0.68
PTPN18-214ENST00000490137 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
PTPN18-214ENST00000490137 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
PTPN18-214ENST00000490137 ATP10BO94823 1461 aa10.77□□□□□ -0.69
PTPN18-214ENST00000490137 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
PTPN18-214ENST00000490137 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
PTPN18-214ENST00000490137 ACIN1Q9UKV3 1341 aaKnown RBP10.76□□□□□ -0.69
PTPN18-214ENST00000490137 ZFYVE16Q7Z3T8 1539 aa10.75□□□□□ -0.69
PTPN18-214ENST00000490137 UHRF1BP1Q6BDS2 1440 aa10.75□□□□□ -0.69
PTPN18-214ENST00000490137 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
PTPN18-214ENST00000490137 CEP162Q5TB80 1403 aa10.71□□□□□ -0.69
PTPN18-214ENST00000490137 SIGLEC1Q9BZZ2 1709 aa10.7□□□□□ -0.7
PTPN18-214ENST00000490137 ATP10AO60312 1499 aa10.68□□□□□ -0.7
PTPN18-214ENST00000490137 C9orf84Q5VXU9 1444 aa10.67□□□□□ -0.7
PTPN18-214ENST00000490137 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
PTPN18-214ENST00000490137 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
PTPN18-214ENST00000490137 NCBP3Q53F19 620 aaKnown RBP10.66□□□□□ -0.7
PTPN18-214ENST00000490137 DIEXFQ68CQ4 756 aaKnown RBP10.66□□□□□ -0.7
PTPN18-214ENST00000490137 NCOA1Q15788 1441 aa10.65□□□□□ -0.7
PTPN18-214ENST00000490137 MED1Q15648 1581 aaPredicted RBP10.65□□□□□ -0.71
PTPN18-214ENST00000490137 REREQ9P2R6 1566 aa10.64□□□□□ -0.71
PTPN18-214ENST00000490137 CLSPNQ9HAW4 1339 aa10.63□□□□□ -0.71
PTPN18-214ENST00000490137 NPM3O75607 178 aaKnown RBP10.63□□□□□ -0.71
PTPN18-214ENST00000490137 MLECQ14165 292 aa10.63□□□□□ -0.71
PTPN18-214ENST00000490137 TRAPPC8Q9Y2L5 1435 aa10.63□□□□□ -0.71
PTPN18-214ENST00000490137 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
PTPN18-214ENST00000490137 UBAP1LF5GYI3 381 aa10.62□□□□□ -0.71
PTPN18-214ENST00000490137 DSG3P32926 999 aa10.62□□□□□ -0.71
PTPN18-214ENST00000490137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTPN18-214ENST00000490137 SAMD9Q5K651 1589 aa10.61□□□□□ -0.71
PTPN18-214ENST00000490137 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
PTPN18-214ENST00000490137 C3P01024 1663 aa10.6□□□□□ -0.71
PTPN18-214ENST00000490137 AGLP35573 1532 aa10.6□□□□□ -0.71
PTPN18-214ENST00000490137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.6□□□□□ -0.71
PTPN18-214ENST00000490137 CEBPAP49715 358 aaPredicted RBP10.6□□□□□ -0.71
PTPN18-214ENST00000490137 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
PTPN18-214ENST00000490137 PRXQ9BXM0 1461 aa10.6□□□□□ -0.71
PTPN18-214ENST00000490137 SCAPERQ9BY12 1400 aa10.59□□□□□ -0.71
PTPN18-214ENST00000490137 CNTLNQ9NXG0 1405 aa10.59□□□□□ -0.71
PTPN18-214ENST00000490137 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
PTPN18-214ENST00000490137 CAPN15O75808 1086 aa10.59□□□□□ -0.71
PTPN18-214ENST00000490137 HNRNPUL2Q1KMD3 747 aaKnown RBP10.59□□□□□ -0.71
PTPN18-214ENST00000490137 PLCH2O75038 1416 aa10.58□□□□□ -0.72
PTPN18-214ENST00000490137 NPATQ14207 1427 aa10.58□□□□□ -0.72
PTPN18-214ENST00000490137 PLA2R1Q13018 1463 aa10.58□□□□□ -0.72
PTPN18-214ENST00000490137 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
PTPN18-214ENST00000490137 SPINK5Q9NQ38 1064 aaPredicted RBP10.58□□□□□ -0.72
PTPN18-214ENST00000490137 ZNF518AQ6AHZ1 1483 aa10.57□□□□□ -0.72
PTPN18-214ENST00000490137 ARID3CA6NKF2 412 aa10.57□□□□□ -0.72
PTPN18-214ENST00000490137 PKD2Q13563 968 aa10.57□□□□□ -0.72
PTPN18-214ENST00000490137 KDM5CP41229 1560 aa10.56□□□□□ -0.72
PTPN18-214ENST00000490137 CAMSAP1Q5T5Y3 1602 aa10.55□□□□□ -0.72
PTPN18-214ENST00000490137 TOM1O60784 492 aa10.55□□□□□ -0.72
PTPN18-214ENST00000490137 MROH2AA6NES4 1674 aa10.54□□□□□ -0.72
PTPN18-214ENST00000490137 ESF1Q9H501 851 aaKnown RBP10.54□□□□□ -0.72
PTPN18-214ENST00000490137 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
PTPN18-214ENST00000490137 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
PTPN18-214ENST00000490137 HSPA1LP34931 641 aa10.53□□□□□ -0.72
PTPN18-214ENST00000490137 EFCAB2Q5VUJ9 269 aa10.53□□□□□ -0.72
PTPN18-214ENST00000490137 ZNF142P52746 1687 aaPredicted RBP10.53□□□□□ -0.72
PTPN18-214ENST00000490137 ZNF335Q9H4Z2 1342 aaPredicted RBP10.53□□□□□ -0.72
PTPN18-214ENST00000490137 CPS1P31327 1500 aa10.53□□□□□ -0.72
PTPN18-214ENST00000490137 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
PTPN18-214ENST00000490137 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
PTPN18-214ENST00000490137 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
PTPN18-214ENST00000490137 DIP2CQ9Y2E4 1556 aa10.52□□□□□ -0.73
PTPN18-214ENST00000490137 MYO5CQ9NQX4 1742 aa10.51□□□□□ -0.73
PTPN18-214ENST00000490137 PTPRKQ15262 1439 aa10.5□□□□□ -0.73
PTPN18-214ENST00000490137 P3H3Q8IVL6 736 aa10.49□□□□□ -0.73
PTPN18-214ENST00000490137 CLIP1P30622 1438 aa10.49□□□□□ -0.73
PTPN18-214ENST00000490137 SUPT6HQ7KZ85 1726 aaKnown RBP10.47□□□□□ -0.73
PTPN18-214ENST00000490137 UBTFP17480 764 aaKnown RBP10.46□□□□□ -0.73
PTPN18-214ENST00000490137 ABCA6Q8N139 1617 aa10.46□□□□□ -0.74
PTPN18-214ENST00000490137 MYO3AQ8NEV4 1616 aa10.45□□□□□ -0.74
PTPN18-214ENST00000490137 CEP170BQ9Y4F5 1589 aaPredicted RBP10.45□□□□□ -0.74
PTPN18-214ENST00000490137 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
PTPN18-214ENST00000490137 ZMYM3Q14202 1370 aa10.44□□□□□ -0.74
PTPN18-214ENST00000490137 AFAP1Q8N556 730 aa10.43□□□□□ -0.74
PTPN18-214ENST00000490137 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
PTPN18-214ENST00000490137 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms