RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 ARHGEF12Q9NZN5 1544 aa25.59■■□□□ 1.69
SDHAF3-204ENST00000489852 P3H3Q8IVL6 736 aa25.58■■□□□ 1.69
SDHAF3-204ENST00000489852 CFAP74Q9C0B2 1584 aa25.56■■□□□ 1.68
SDHAF3-204ENST00000489852 SETD1BQ9UPS6 1966 aaKnown RBP25.52■■□□□ 1.68
SDHAF3-204ENST00000489852 HECW1Q76N89 1606 aa25.52■■□□□ 1.68
SDHAF3-204ENST00000489852 UBAP1LF5GYI3 381 aa25.51■■□□□ 1.67
SDHAF3-204ENST00000489852 RAPGEF6Q8TEU7 1601 aa25.48■■□□□ 1.67
SDHAF3-204ENST00000489852 ATP10AO60312 1499 aa25.47■■□□□ 1.67
SDHAF3-204ENST00000489852 C9orf84Q5VXU9 1444 aa25.45■■□□□ 1.66
SDHAF3-204ENST00000489852 PLEKHD1A6NEE1 506 aa25.44■■□□□ 1.66
SDHAF3-204ENST00000489852 MED1Q15648 1581 aaPredicted RBP25.4■■□□□ 1.66
SDHAF3-204ENST00000489852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.4■■□□□ 1.661e-6■□□□□ 10.6
SDHAF3-204ENST00000489852 SCAPERQ9BY12 1400 aa25.39■■□□□ 1.66
SDHAF3-204ENST00000489852 NUP153P49790 1475 aaKnown RBP25.39■■□□□ 1.65
SDHAF3-204ENST00000489852 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
SDHAF3-204ENST00000489852 ZNF335Q9H4Z2 1342 aaPredicted RBP25.33■■□□□ 1.64
SDHAF3-204ENST00000489852 C3P01024 1663 aa25.32■■□□□ 1.64
SDHAF3-204ENST00000489852 PRXQ9BXM0 1461 aa25.31■■□□□ 1.64
SDHAF3-204ENST00000489852 TRAPPC8Q9Y2L5 1435 aa25.3■■□□□ 1.64
SDHAF3-204ENST00000489852 HSPA1LP34931 641 aa25.3■■□□□ 1.64
SDHAF3-204ENST00000489852 SAMD9Q5K651 1589 aa25.3■■□□□ 1.64
SDHAF3-204ENST00000489852 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
SDHAF3-204ENST00000489852 ESF1Q9H501 851 aaKnown RBP25.27■■□□□ 1.64
SDHAF3-204ENST00000489852 SCAF1Q9H7N4 1312 aaKnown RBP25.26■■□□□ 1.63
SDHAF3-204ENST00000489852 CAMSAP1Q5T5Y3 1602 aa25.25■■□□□ 1.63
SDHAF3-204ENST00000489852 PLCH2O75038 1416 aa25.24■■□□□ 1.63
SDHAF3-204ENST00000489852 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
SDHAF3-204ENST00000489852 PIP4K2BP78356 416 aa25.21■■□□□ 1.63
SDHAF3-204ENST00000489852 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
SDHAF3-204ENST00000489852 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
SDHAF3-204ENST00000489852 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
SDHAF3-204ENST00000489852 AFAP1Q8N556 730 aa25.15■■□□□ 1.62
SDHAF3-204ENST00000489852 TOM1O60784 492 aa25.13■■□□□ 1.61
SDHAF3-204ENST00000489852 REREQ9P2R6 1566 aa25.13■■□□□ 1.61
SDHAF3-204ENST00000489852 DIP2CQ9Y2E4 1556 aa25.13■■□□□ 1.61
SDHAF3-204ENST00000489852 PKD2Q13563 968 aa25.12■■□□□ 1.61
SDHAF3-204ENST00000489852 AGLP35573 1532 aa25.11■■□□□ 1.61
SDHAF3-204ENST00000489852 CNTLNQ9NXG0 1405 aa25.1■■□□□ 1.61
SDHAF3-204ENST00000489852 KDM5CP41229 1560 aa25.1■■□□□ 1.61
SDHAF3-204ENST00000489852 RANGAP1P46060 587 aaPredicted RBP25.09■■□□□ 1.61
SDHAF3-204ENST00000489852 NPATQ14207 1427 aa25.08■■□□□ 1.61
SDHAF3-204ENST00000489852 MYO5CQ9NQX4 1742 aa25.06■■□□□ 1.6
SDHAF3-204ENST00000489852 PLA2R1Q13018 1463 aa25.05■■□□□ 1.6
SDHAF3-204ENST00000489852 PPP6R1Q9UPN7 881 aa25.05■■□□□ 1.6
SDHAF3-204ENST00000489852 ABCA6Q8N139 1617 aa25.04■■□□□ 1.6
SDHAF3-204ENST00000489852 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
SDHAF3-204ENST00000489852 TCOF1Q13428 1488 aaKnown RBP25.02■■□□□ 1.6
SDHAF3-204ENST00000489852 MLH3Q9UHC1 1453 aa25■■□□□ 1.59
SDHAF3-204ENST00000489852 SUPT6HQ7KZ85 1726 aaKnown RBP24.99■■□□□ 1.59
SDHAF3-204ENST00000489852 ZMYM3Q14202 1370 aa24.98■■□□□ 1.59
SDHAF3-204ENST00000489852 ARHGAP5Q13017 1502 aa24.96■■□□□ 1.59
SDHAF3-204ENST00000489852 MROH2AA6NES4 1674 aa24.96■■□□□ 1.59
SDHAF3-204ENST00000489852 CPS1P31327 1500 aa24.95■■□□□ 1.58
SDHAF3-204ENST00000489852 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
SDHAF3-204ENST00000489852 MYO3AQ8NEV4 1616 aa24.93■■□□□ 1.58
SDHAF3-204ENST00000489852 CEP170BQ9Y4F5 1589 aaPredicted RBP24.93■■□□□ 1.58
SDHAF3-204ENST00000489852 RGS17Q9UGC6 210 aaPredicted RBP24.91■■□□□ 1.58
SDHAF3-204ENST00000489852 PTPRKQ15262 1439 aa24.91■■□□□ 1.58
SDHAF3-204ENST00000489852 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
SDHAF3-204ENST00000489852 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
SDHAF3-204ENST00000489852 KIF14Q15058 1648 aa24.87■■□□□ 1.57
SDHAF3-204ENST00000489852 CDK11AQ9UQ88 783 aaPredicted RBP24.87■■□□□ 1.57
SDHAF3-204ENST00000489852 ATP1B4Q9UN42 357 aaPredicted RBP24.85■■□□□ 1.57
SDHAF3-204ENST00000489852 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
SDHAF3-204ENST00000489852 ALKQ9UM73 1620 aa24.83■■□□□ 1.56
SDHAF3-204ENST00000489852 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
SDHAF3-204ENST00000489852 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
SDHAF3-204ENST00000489852 CDC42BPBQ9Y5S2 1711 aa24.78■■□□□ 1.56
SDHAF3-204ENST00000489852 ABCC1P33527 1531 aa24.77■■□□□ 1.56
SDHAF3-204ENST00000489852 TROQ12816 1431 aaPredicted RBP24.76■■□□□ 1.55
SDHAF3-204ENST00000489852 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
SDHAF3-204ENST00000489852 ITSN2Q9NZM3 1697 aa24.75■■□□□ 1.55
SDHAF3-204ENST00000489852 DNMT1P26358 1616 aaKnown RBP24.75■■□□□ 1.55
SDHAF3-204ENST00000489852 POLR1AO95602 1720 aaPredicted RBP24.75■■□□□ 1.55
SDHAF3-204ENST00000489852 CLIP1P30622 1438 aa24.74■■□□□ 1.55
SDHAF3-204ENST00000489852 NEURL4Q96JN8 1562 aa24.73■■□□□ 1.55
SDHAF3-204ENST00000489852 POTEAQ6S8J7 498 aa24.72■■□□□ 1.55
SDHAF3-204ENST00000489852 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
SDHAF3-204ENST00000489852 GGT6Q6P531 493 aa24.68■■□□□ 1.54
SDHAF3-204ENST00000489852 PREX2Q70Z35 1606 aa24.67■■□□□ 1.54
SDHAF3-204ENST00000489852 ANKLE2Q86XL3 938 aa24.66■■□□□ 1.54
SDHAF3-204ENST00000489852 SAMD9LQ8IVG5 1584 aa24.65■■□□□ 1.54
SDHAF3-204ENST00000489852 SPAG9O60271 1321 aaKnown RBP24.63■■□□□ 1.53
SDHAF3-204ENST00000489852 FMN1Q68DA7 1419 aa24.63■■□□□ 1.53
SDHAF3-204ENST00000489852 RNF17Q9BXT8 1623 aaKnown RBP24.61■■□□□ 1.53
SDHAF3-204ENST00000489852 LRRC7Q96NW7 1537 aa24.6■■□□□ 1.53
SDHAF3-204ENST00000489852 PLXNC1O60486 1568 aa24.59■■□□□ 1.53
SDHAF3-204ENST00000489852 A2MP01023 1474 aa24.58■■□□□ 1.53
SDHAF3-204ENST00000489852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.58■■□□□ 1.531e-9■■■■■ 28.6
SDHAF3-204ENST00000489852 NPHP4O75161 1426 aaPredicted RBP24.58■■□□□ 1.53
SDHAF3-204ENST00000489852 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.52
SDHAF3-204ENST00000489852 ZNF777Q9ULD5 760 aaPredicted RBP24.56■■□□□ 1.52
SDHAF3-204ENST00000489852 TNRQ92752 1358 aa24.55■■□□□ 1.52
SDHAF3-204ENST00000489852 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
SDHAF3-204ENST00000489852 MED14O60244 1454 aa24.55■■□□□ 1.52
SDHAF3-204ENST00000489852 ATP7AQ04656 1500 aa24.54■■□□□ 1.52
SDHAF3-204ENST00000489852 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
SDHAF3-204ENST00000489852 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.524e-6■■■□□ 18.7
SDHAF3-204ENST00000489852 FBXO31Q5XUX0 539 aaPredicted RBP24.52■■□□□ 1.52
SDHAF3-204ENST00000489852 SYNMO15061 1565 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms