RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
SSBP1-212ENST00000489378 PHLDB1Q86UU1 1377 aa16.17■□□□□ 0.18
SSBP1-212ENST00000489378 ABCA9Q8IUA7 1624 aa16.15■□□□□ 0.18
SSBP1-212ENST00000489378 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
SSBP1-212ENST00000489378 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
SSBP1-212ENST00000489378 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
SSBP1-212ENST00000489378 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
SSBP1-212ENST00000489378 ATP10BO94823 1461 aa16.12■□□□□ 0.17
SSBP1-212ENST00000489378 NEO1Q92859 1461 aa16.12■□□□□ 0.17
SSBP1-212ENST00000489378 ARHGEF40Q8TER5 1519 aa16.1■□□□□ 0.17
SSBP1-212ENST00000489378 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
SSBP1-212ENST00000489378 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
SSBP1-212ENST00000489378 RICTORQ6R327 1708 aa16.04■□□□□ 0.16
SSBP1-212ENST00000489378 P3H3Q8IVL6 736 aa16.02■□□□□ 0.16
SSBP1-212ENST00000489378 DENND4BO75064 1496 aaPredicted RBP16.02■□□□□ 0.15
SSBP1-212ENST00000489378 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
SSBP1-212ENST00000489378 FANCAO15360 1455 aa16.01■□□□□ 0.15
SSBP1-212ENST00000489378 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
SSBP1-212ENST00000489378 AKNAQ7Z591 1439 aa16■□□□□ 0.15
SSBP1-212ENST00000489378 MLECQ14165 292 aa15.99■□□□□ 0.15
SSBP1-212ENST00000489378 YEATS2Q9ULM3 1422 aa15.99■□□□□ 0.15
SSBP1-212ENST00000489378 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
SSBP1-212ENST00000489378 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
SSBP1-212ENST00000489378 STRCQ7RTU9 1775 aa15.97■□□□□ 0.15
SSBP1-212ENST00000489378 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SSBP1-212ENST00000489378 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
SSBP1-212ENST00000489378 ZMYM4Q5VZL5 1548 aa15.96■□□□□ 0.14
SSBP1-212ENST00000489378 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-212ENST00000489378 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
SSBP1-212ENST00000489378 RAPGEF6Q8TEU7 1601 aa15.94■□□□□ 0.14
SSBP1-212ENST00000489378 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
SSBP1-212ENST00000489378 CEBPAP49715 358 aaPredicted RBP15.93■□□□□ 0.14
SSBP1-212ENST00000489378 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
SSBP1-212ENST00000489378 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
SSBP1-212ENST00000489378 ARHGEF12Q9NZN5 1544 aa15.9■□□□□ 0.14
SSBP1-212ENST00000489378 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
SSBP1-212ENST00000489378 CFAP74Q9C0B2 1584 aa15.9■□□□□ 0.14
SSBP1-212ENST00000489378 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
SSBP1-212ENST00000489378 SAMD9Q5K651 1589 aa15.88■□□□□ 0.13
SSBP1-212ENST00000489378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■□□□□ 8.3
SSBP1-212ENST00000489378 POLA2Q14181 598 aa15.86■□□□□ 0.13
SSBP1-212ENST00000489378 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
SSBP1-212ENST00000489378 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
SSBP1-212ENST00000489378 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
SSBP1-212ENST00000489378 PTPRTO14522 1441 aa15.84■□□□□ 0.13
SSBP1-212ENST00000489378 UHRF1BP1Q6BDS2 1440 aa15.84■□□□□ 0.13
SSBP1-212ENST00000489378 ATP10AO60312 1499 aa15.83■□□□□ 0.12
SSBP1-212ENST00000489378 ZBTB22O15209 634 aa15.83■□□□□ 0.12
SSBP1-212ENST00000489378 SETD1BQ9UPS6 1966 aaKnown RBP15.83■□□□□ 0.12
SSBP1-212ENST00000489378 C9orf84Q5VXU9 1444 aa15.82■□□□□ 0.12
SSBP1-212ENST00000489378 SCAPERQ9BY12 1400 aa15.82■□□□□ 0.12
SSBP1-212ENST00000489378 POTEHQ6S545 545 aa15.81■□□□□ 0.12
SSBP1-212ENST00000489378 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
SSBP1-212ENST00000489378 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
SSBP1-212ENST00000489378 PLCH2O75038 1416 aa15.75■□□□□ 0.11
SSBP1-212ENST00000489378 C3P01024 1663 aa15.74■□□□□ 0.11
SSBP1-212ENST00000489378 NCOA1Q15788 1441 aa15.73■□□□□ 0.11
SSBP1-212ENST00000489378 UBAP1LF5GYI3 381 aa15.71■□□□□ 0.11
SSBP1-212ENST00000489378 CDK13Q14004 1512 aaKnown RBP15.7■□□□□ 0.1
SSBP1-212ENST00000489378 TRAPPC8Q9Y2L5 1435 aa15.69■□□□□ 0.1
SSBP1-212ENST00000489378 ZNF335Q9H4Z2 1342 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-212ENST00000489378 EFCAB2Q5VUJ9 269 aa15.68■□□□□ 0.1
SSBP1-212ENST00000489378 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
SSBP1-212ENST00000489378 AFAP1Q8N556 730 aa15.68■□□□□ 0.1
SSBP1-212ENST00000489378 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
SSBP1-212ENST00000489378 KDM5CP41229 1560 aa15.67■□□□□ 0.1
SSBP1-212ENST00000489378 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
SSBP1-212ENST00000489378 MYO5CQ9NQX4 1742 aa15.66■□□□□ 0.1
SSBP1-212ENST00000489378 CAMSAP1Q5T5Y3 1602 aa15.66■□□□□ 0.1
SSBP1-212ENST00000489378 MED1Q15648 1581 aaPredicted RBP15.65■□□□□ 0.1
SSBP1-212ENST00000489378 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
SSBP1-212ENST00000489378 NCKAP5LQ9HCH0 1330 aa15.64■□□□□ 0.09
SSBP1-212ENST00000489378 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
SSBP1-212ENST00000489378 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
SSBP1-212ENST00000489378 MYT1LQ9UL68 1186 aa15.64■□□□□ 0.09
SSBP1-212ENST00000489378 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
SSBP1-212ENST00000489378 KIF14Q15058 1648 aa15.61■□□□□ 0.09
SSBP1-212ENST00000489378 AGLP35573 1532 aa15.6■□□□□ 0.09
SSBP1-212ENST00000489378 HSPA1LP34931 641 aa15.6■□□□□ 0.09
SSBP1-212ENST00000489378 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
SSBP1-212ENST00000489378 MLH3Q9UHC1 1453 aa15.58■□□□□ 0.09
SSBP1-212ENST00000489378 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
SSBP1-212ENST00000489378 NPATQ14207 1427 aa15.56■□□□□ 0.08
SSBP1-212ENST00000489378 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
SSBP1-212ENST00000489378 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
SSBP1-212ENST00000489378 ZMYM3Q14202 1370 aa15.53■□□□□ 0.08
SSBP1-212ENST00000489378 MROH2AA6NES4 1674 aa15.53■□□□□ 0.08
SSBP1-212ENST00000489378 PKD2Q13563 968 aa15.52■□□□□ 0.08
SSBP1-212ENST00000489378 PLA2R1Q13018 1463 aa15.52■□□□□ 0.08
SSBP1-212ENST00000489378 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.08
SSBP1-212ENST00000489378 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
SSBP1-212ENST00000489378 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
SSBP1-212ENST00000489378 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-212ENST00000489378 MYO3AQ8NEV4 1616 aa15.51■□□□□ 0.07
SSBP1-212ENST00000489378 TROQ12816 1431 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-212ENST00000489378 ABCC1P33527 1531 aa15.5■□□□□ 0.07
SSBP1-212ENST00000489378 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-212ENST00000489378 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
SSBP1-212ENST00000489378 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
SSBP1-212ENST00000489378 ITSN2Q9NZM3 1697 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms