RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PLB1Q6P1J6 1458 aa10.66□□□□□ -0.7
BEST3-205ENST00000488961 MRC2Q9UBG0 1479 aa10.66□□□□□ -0.7
BEST3-205ENST00000488961 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
BEST3-205ENST00000488961 ANP32CO43423 234 aa10.65□□□□□ -0.7
BEST3-205ENST00000488961 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.7
BEST3-205ENST00000488961 IQGAP2Q13576 1575 aa10.65□□□□□ -0.7
BEST3-205ENST00000488961 MAP3K1Q13233 1512 aa10.65□□□□□ -0.7
BEST3-205ENST00000488961 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
BEST3-205ENST00000488961 CFDP1Q9UEE9 299 aaPredicted RBP10.64□□□□□ -0.71
BEST3-205ENST00000488961 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
BEST3-205ENST00000488961 NBPF8Q3BBV2 869 aa10.63□□□□□ -0.71
BEST3-205ENST00000488961 FAM9BQ8IZU0 186 aa10.63□□□□□ -0.71
BEST3-205ENST00000488961 HFM1A2PYH4 1435 aa10.62□□□□□ -0.71
BEST3-205ENST00000488961 JPH4Q96JJ6 628 aa10.62□□□□□ -0.71
BEST3-205ENST00000488961 HNRNPMP52272 730 aaKnown RBP eCLIP10.62□□□□□ -0.71
BEST3-205ENST00000488961 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.71
BEST3-205ENST00000488961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.61□□□□□ -0.71
BEST3-205ENST00000488961 ADAMTS12P58397 1594 aa10.61□□□□□ -0.71
BEST3-205ENST00000488961 UACAQ9BZF9 1416 aa10.61□□□□□ -0.71
BEST3-205ENST00000488961 WASHC2AQ641Q2 1341 aa10.6□□□□□ -0.71
BEST3-205ENST00000488961 UGGT2Q9NYU1 1516 aa10.6□□□□□ -0.71
BEST3-205ENST00000488961 DENND4BO75064 1496 aaPredicted RBP10.59□□□□□ -0.71
BEST3-205ENST00000488961 EIF4G3O43432 1585 aaKnown RBP10.59□□□□□ -0.71
BEST3-205ENST00000488961 SENP3Q9H4L4 574 aaPredicted RBP10.59□□□□□ -0.71
BEST3-205ENST00000488961 EHBP1L1Q8N3D4 1523 aa10.59□□□□□ -0.71
BEST3-205ENST00000488961 DISP1Q96F81 1524 aa10.58□□□□□ -0.72
BEST3-205ENST00000488961 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
BEST3-205ENST00000488961 RGL3Q3MIN7 710 aa10.57□□□□□ -0.72
BEST3-205ENST00000488961 HECW1Q76N89 1606 aa10.56□□□□□ -0.72
BEST3-205ENST00000488961 PKD2Q13563 968 aa10.56□□□□□ -0.72
BEST3-205ENST00000488961 PKNOX2Q96KN3 472 aa10.56□□□□□ -0.72
BEST3-205ENST00000488961 WDR62O43379 1518 aa10.56□□□□□ -0.72
BEST3-205ENST00000488961 GRIN2AQ12879 1464 aa10.56□□□□□ -0.72
BEST3-205ENST00000488961 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
BEST3-205ENST00000488961 ERICH6BQ5W0A0 696 aa10.55□□□□□ -0.72
BEST3-205ENST00000488961 KIF14Q15058 1648 aa10.55□□□□□ -0.72
BEST3-205ENST00000488961 EIF4G2P78344 907 aaKnown RBP eCLIP10.54□□□□□ -0.72
BEST3-205ENST00000488961 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
BEST3-205ENST00000488961 ABCC5O15440 1437 aa10.54□□□□□ -0.72
BEST3-205ENST00000488961 IFT140Q96RY7 1462 aa10.53□□□□□ -0.72
BEST3-205ENST00000488961 CEP170Q5SW79 1584 aa10.53□□□□□ -0.72
BEST3-205ENST00000488961 DAPK1P53355 1430 aa10.53□□□□□ -0.72
BEST3-205ENST00000488961 KIAA0556O60303 1618 aa10.53□□□□□ -0.72
BEST3-205ENST00000488961 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
BEST3-205ENST00000488961 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.72
BEST3-205ENST00000488961 ARHGEF11O15085 1522 aa10.51□□□□□ -0.73
BEST3-205ENST00000488961 KIAA0586Q9BVV6 1533 aa10.51□□□□□ -0.73
BEST3-205ENST00000488961 KDM5BQ9UGL1 1544 aa10.5□□□□□ -0.73
BEST3-205ENST00000488961 MRS2Q9HD23 443 aa10.5□□□□□ -0.73
BEST3-205ENST00000488961 NBR1Q14596 966 aa10.49□□□□□ -0.73
BEST3-205ENST00000488961 RAPGEF6Q8TEU7 1601 aa10.49□□□□□ -0.73
BEST3-205ENST00000488961 DCAF11Q8TEB1 546 aa10.49□□□□□ -0.73
BEST3-205ENST00000488961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.49□□□□□ -0.73
BEST3-205ENST00000488961 NUP155O75694 1391 aa10.48□□□□□ -0.73
BEST3-205ENST00000488961 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
BEST3-205ENST00000488961 CAMSAP2Q08AD1 1489 aa10.48□□□□□ -0.73
BEST3-205ENST00000488961 NEFLP07196 543 aa10.48□□□□□ -0.73
BEST3-205ENST00000488961 KIF7Q2M1P5 1343 aa10.46□□□□□ -0.73
BEST3-205ENST00000488961 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.74
BEST3-205ENST00000488961 TSPY4P0CV99 314 aa10.45□□□□□ -0.74
BEST3-205ENST00000488961 TSPY10P0CW01 314 aa10.45□□□□□ -0.74
BEST3-205ENST00000488961 GPATCH8Q9UKJ3 1502 aaKnown RBP10.45□□□□□ -0.74
BEST3-205ENST00000488961 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
BEST3-205ENST00000488961 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
BEST3-205ENST00000488961 SYNJ2O15056 1496 aa10.44□□□□□ -0.74
BEST3-205ENST00000488961 TROQ12816 1431 aaPredicted RBP10.44□□□□□ -0.74
BEST3-205ENST00000488961 TCOF1Q13428 1488 aaKnown RBP10.44□□□□□ -0.74
BEST3-205ENST00000488961 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
BEST3-205ENST00000488961 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
BEST3-205ENST00000488961 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
BEST3-205ENST00000488961 PRKRIP1Q9H875 184 aaPredicted RBP10.43□□□□□ -0.74
BEST3-205ENST00000488961 NCOA1Q15788 1441 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 ATP10BO94823 1461 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 NBPF1Q3BBV0 1214 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 CARMIL2Q6F5E8 1435 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 CCDC7Q96M83 1385 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 PTPRGP23470 1445 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
BEST3-205ENST00000488961 CCER2I3L3R5 266 aa10.41□□□□□ -0.74
BEST3-205ENST00000488961 PZPP20742 1482 aa10.41□□□□□ -0.74
BEST3-205ENST00000488961 B4GALNT3Q6L9W6 998 aa10.4□□□□□ -0.74
BEST3-205ENST00000488961 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.74
BEST3-205ENST00000488961 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.75
BEST3-205ENST00000488961 AKNAQ7Z591 1439 aa10.4□□□□□ -0.75
BEST3-205ENST00000488961 USP47Q96K76 1375 aa10.38□□□□□ -0.75
BEST3-205ENST00000488961 KIF15Q9NS87 1388 aa10.38□□□□□ -0.75
BEST3-205ENST00000488961 ANKRD30AQ9BXX3 1397 aa10.38□□□□□ -0.75
BEST3-205ENST00000488961 RPRD2Q5VT52 1461 aaKnown RBP10.38□□□□□ -0.75
BEST3-205ENST00000488961 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
BEST3-205ENST00000488961 MAGI1Q96QZ7 1491 aaPredicted RBP10.37□□□□□ -0.75
BEST3-205ENST00000488961 AFAP1Q8N556 730 aa10.37□□□□□ -0.75
BEST3-205ENST00000488961 CC2D1BQ5T0F9 858 aaKnown RBP10.37□□□□□ -0.75
BEST3-205ENST00000488961 TEX14Q8IWB6 1497 aa10.37□□□□□ -0.75
BEST3-205ENST00000488961 CNTLNQ9NXG0 1405 aa10.36□□□□□ -0.75
BEST3-205ENST00000488961 CDC42BPAQ5VT25 1732 aa10.36□□□□□ -0.75
BEST3-205ENST00000488961 CHD1O14646 1710 aa10.34□□□□□ -0.75
BEST3-205ENST00000488961 BCORL1Q5H9F3 1711 aa10.34□□□□□ -0.75
BEST3-205ENST00000488961 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
BEST3-205ENST00000488961 NUP160Q12769 1436 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms