RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 UHRF1BP1Q6BDS2 1440 aa21.9■■□□□ 1.1
HLA-DPB1-216ENST00000488575 SAMD9Q5K651 1589 aa21.89■■□□□ 1.09
HLA-DPB1-216ENST00000488575 MLECQ14165 292 aa21.88■■□□□ 1.09
HLA-DPB1-216ENST00000488575 PRXQ9BXM0 1461 aa21.88■■□□□ 1.09
HLA-DPB1-216ENST00000488575 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
HLA-DPB1-216ENST00000488575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.86■■□□□ 1.09
HLA-DPB1-216ENST00000488575 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
HLA-DPB1-216ENST00000488575 ATP10AO60312 1499 aa21.83■■□□□ 1.09
HLA-DPB1-216ENST00000488575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
HLA-DPB1-216ENST00000488575 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
HLA-DPB1-216ENST00000488575 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
HLA-DPB1-216ENST00000488575 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
HLA-DPB1-216ENST00000488575 PLEKHD1A6NEE1 506 aa21.76■■□□□ 1.07
HLA-DPB1-216ENST00000488575 C3P01024 1663 aa21.75■■□□□ 1.07
HLA-DPB1-216ENST00000488575 NCOA1Q15788 1441 aa21.74■■□□□ 1.07
HLA-DPB1-216ENST00000488575 SCAPERQ9BY12 1400 aa21.74■■□□□ 1.07
HLA-DPB1-216ENST00000488575 REREQ9P2R6 1566 aa21.7■■□□□ 1.06
HLA-DPB1-216ENST00000488575 PLCH2O75038 1416 aa21.7■■□□□ 1.06
HLA-DPB1-216ENST00000488575 MED1Q15648 1581 aaPredicted RBP21.68■■□□□ 1.06
HLA-DPB1-216ENST00000488575 KDM5CP41229 1560 aa21.66■■□□□ 1.06
HLA-DPB1-216ENST00000488575 TRAPPC8Q9Y2L5 1435 aa21.66■■□□□ 1.06
HLA-DPB1-216ENST00000488575 ZNF518AQ6AHZ1 1483 aa21.65■■□□□ 1.06
HLA-DPB1-216ENST00000488575 UBAP1LF5GYI3 381 aa21.64■■□□□ 1.05
HLA-DPB1-216ENST00000488575 DIP2CQ9Y2E4 1556 aa21.63■■□□□ 1.05
HLA-DPB1-216ENST00000488575 MYO5CQ9NQX4 1742 aa21.63■■□□□ 1.05
HLA-DPB1-216ENST00000488575 CAMSAP1Q5T5Y3 1602 aa21.62■■□□□ 1.05
HLA-DPB1-216ENST00000488575 AGLP35573 1532 aa21.61■■□□□ 1.05
HLA-DPB1-216ENST00000488575 ZNF335Q9H4Z2 1342 aaPredicted RBP21.56■■□□□ 1.04
HLA-DPB1-216ENST00000488575 ABCA6Q8N139 1617 aa21.56■■□□□ 1.04
HLA-DPB1-216ENST00000488575 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
HLA-DPB1-216ENST00000488575 EFCAB2Q5VUJ9 269 aa21.55■■□□□ 1.04
HLA-DPB1-216ENST00000488575 NPATQ14207 1427 aa21.55■■□□□ 1.04
HLA-DPB1-216ENST00000488575 MROH2AA6NES4 1674 aa21.53■■□□□ 1.04
HLA-DPB1-216ENST00000488575 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
HLA-DPB1-216ENST00000488575 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.04
HLA-DPB1-216ENST00000488575 CDK13Q14004 1512 aaKnown RBP21.52■■□□□ 1.04
HLA-DPB1-216ENST00000488575 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.04
HLA-DPB1-216ENST00000488575 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
HLA-DPB1-216ENST00000488575 TCOF1Q13428 1488 aaKnown RBP21.48■■□□□ 1.03
HLA-DPB1-216ENST00000488575 HSPA1LP34931 641 aa21.48■■□□□ 1.03
HLA-DPB1-216ENST00000488575 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
HLA-DPB1-216ENST00000488575 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
HLA-DPB1-216ENST00000488575 PKD2Q13563 968 aa21.46■■□□□ 1.03
HLA-DPB1-216ENST00000488575 NCKAP5LQ9HCH0 1330 aa21.45■■□□□ 1.02
HLA-DPB1-216ENST00000488575 ARHGAP5Q13017 1502 aa21.45■■□□□ 1.02
HLA-DPB1-216ENST00000488575 MYO3AQ8NEV4 1616 aa21.44■■□□□ 1.02
HLA-DPB1-216ENST00000488575 KIF14Q15058 1648 aa21.44■■□□□ 1.02
HLA-DPB1-216ENST00000488575 CEP170BQ9Y4F5 1589 aaPredicted RBP21.41■■□□□ 1.02
HLA-DPB1-216ENST00000488575 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
HLA-DPB1-216ENST00000488575 CPS1P31327 1500 aa21.39■■□□□ 1.02
HLA-DPB1-216ENST00000488575 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.01
HLA-DPB1-216ENST00000488575 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.01
HLA-DPB1-216ENST00000488575 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
HLA-DPB1-216ENST00000488575 TOM1O60784 492 aa21.38■■□□□ 1.01
HLA-DPB1-216ENST00000488575 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
HLA-DPB1-216ENST00000488575 ZMYM3Q14202 1370 aa21.36■■□□□ 1.01
HLA-DPB1-216ENST00000488575 ABCC1P33527 1531 aa21.36■■□□□ 1.01
HLA-DPB1-216ENST00000488575 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
HLA-DPB1-216ENST00000488575 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
HLA-DPB1-216ENST00000488575 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
HLA-DPB1-216ENST00000488575 PIP4K2BP78356 416 aa21.34■■□□□ 1.01
HLA-DPB1-216ENST00000488575 RANGAP1P46060 587 aaPredicted RBP21.33■■□□□ 1.01
HLA-DPB1-216ENST00000488575 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
HLA-DPB1-216ENST00000488575 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
HLA-DPB1-216ENST00000488575 PREX2Q70Z35 1606 aa21.32■■□□□ 1
HLA-DPB1-216ENST00000488575 CLTCQ00610 1675 aaKnown RBP21.31■■□□□ 1
HLA-DPB1-216ENST00000488575 POLR1AO95602 1720 aaPredicted RBP21.31■■□□□ 1
HLA-DPB1-216ENST00000488575 ALKQ9UM73 1620 aa21.3■■□□□ 1
HLA-DPB1-216ENST00000488575 PTPRKQ15262 1439 aa21.29■■□□□ 1
HLA-DPB1-216ENST00000488575 CLIP1P30622 1438 aa21.28■■□□□ 1
HLA-DPB1-216ENST00000488575 SHANK2Q9UPX8 1470 aa21.27■■□□□ 1
HLA-DPB1-216ENST00000488575 DNMT1P26358 1616 aaKnown RBP21.26■□□□□ 0.99
HLA-DPB1-216ENST00000488575 FMN1Q68DA7 1419 aa21.26■□□□□ 0.99
HLA-DPB1-216ENST00000488575 NEURL4Q96JN8 1562 aa21.26■□□□□ 0.99
HLA-DPB1-216ENST00000488575 A2ML1A8K2U0 1454 aa21.25■□□□□ 0.99
HLA-DPB1-216ENST00000488575 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
HLA-DPB1-216ENST00000488575 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
HLA-DPB1-216ENST00000488575 VWDEQ8N2E2 1590 aa21.21■□□□□ 0.99
HLA-DPB1-216ENST00000488575 EEA1Q15075 1411 aa21.21■□□□□ 0.99
HLA-DPB1-216ENST00000488575 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
HLA-DPB1-216ENST00000488575 RGS17Q9UGC6 210 aaPredicted RBP21.17■□□□□ 0.98
HLA-DPB1-216ENST00000488575 CDC42BPAQ5VT25 1732 aa21.17■□□□□ 0.98
HLA-DPB1-216ENST00000488575 RNF17Q9BXT8 1623 aaKnown RBP21.15■□□□□ 0.98
HLA-DPB1-216ENST00000488575 ATP1B4Q9UN42 357 aaPredicted RBP21.14■□□□□ 0.97
HLA-DPB1-216ENST00000488575 INO80Q9ULG1 1556 aaPredicted RBP21.14■□□□□ 0.97
HLA-DPB1-216ENST00000488575 ATP7AQ04656 1500 aa21.14■□□□□ 0.97
HLA-DPB1-216ENST00000488575 A2MP01023 1474 aa21.11■□□□□ 0.97
HLA-DPB1-216ENST00000488575 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
HLA-DPB1-216ENST00000488575 SYNMO15061 1565 aa21.1■□□□□ 0.97
HLA-DPB1-216ENST00000488575 SYCP2Q9BX26 1530 aa21.1■□□□□ 0.97
HLA-DPB1-216ENST00000488575 MED14O60244 1454 aa21.1■□□□□ 0.97
HLA-DPB1-216ENST00000488575 SPAG9O60271 1321 aaKnown RBP21.09■□□□□ 0.97
HLA-DPB1-216ENST00000488575 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.97
HLA-DPB1-216ENST00000488575 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
HLA-DPB1-216ENST00000488575 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
HLA-DPB1-216ENST00000488575 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
HLA-DPB1-216ENST00000488575 IQGAP1P46940 1657 aa21.05■□□□□ 0.96
HLA-DPB1-216ENST00000488575 NPHP4O75161 1426 aaPredicted RBP21.04■□□□□ 0.96
HLA-DPB1-216ENST00000488575 GGT6Q6P531 493 aa21.03■□□□□ 0.96
HLA-DPB1-216ENST00000488575 ANKLE2Q86XL3 938 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms