RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 MAGI2Q86UL8 1455 aa18.17■□□□□ 0.5
LCN2-206ENST00000488391 PLCH2O75038 1416 aa18.15■□□□□ 0.5
LCN2-206ENST00000488391 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.5
LCN2-206ENST00000488391 CDK13Q14004 1512 aaKnown RBP18.14■□□□□ 0.49
LCN2-206ENST00000488391 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
LCN2-206ENST00000488391 ATP10AO60312 1499 aa18.13■□□□□ 0.49
LCN2-206ENST00000488391 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
LCN2-206ENST00000488391 EEA1Q15075 1411 aa18.12■□□□□ 0.49
LCN2-206ENST00000488391 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
LCN2-206ENST00000488391 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.49
LCN2-206ENST00000488391 ILDR2Q71H61 639 aa18.08■□□□□ 0.48
LCN2-206ENST00000488391 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
LCN2-206ENST00000488391 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.48
LCN2-206ENST00000488391 C9orf84Q5VXU9 1444 aa18.07■□□□□ 0.48
LCN2-206ENST00000488391 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
LCN2-206ENST00000488391 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
LCN2-206ENST00000488391 CDK11AQ9UQ88 783 aaPredicted RBP18.05■□□□□ 0.48
LCN2-206ENST00000488391 PREX1Q8TCU6 1659 aa18.05■□□□□ 0.48
LCN2-206ENST00000488391 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
LCN2-206ENST00000488391 SETD1BQ9UPS6 1966 aaKnown RBP18.03■□□□□ 0.48
LCN2-206ENST00000488391 STRCQ7RTU9 1775 aa18.03■□□□□ 0.48
LCN2-206ENST00000488391 MYO5CQ9NQX4 1742 aa18.02■□□□□ 0.48
LCN2-206ENST00000488391 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
LCN2-206ENST00000488391 SOCS7O14512 581 aa17.99■□□□□ 0.47
LCN2-206ENST00000488391 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
LCN2-206ENST00000488391 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
LCN2-206ENST00000488391 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
LCN2-206ENST00000488391 KIF14Q15058 1648 aa17.98■□□□□ 0.47
LCN2-206ENST00000488391 ESF1Q9H501 851 aaKnown RBP17.97■□□□□ 0.47
LCN2-206ENST00000488391 TROQ12816 1431 aaPredicted RBP17.95■□□□□ 0.46
LCN2-206ENST00000488391 KDM5CP41229 1560 aa17.94■□□□□ 0.46
LCN2-206ENST00000488391 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
LCN2-206ENST00000488391 DIP2CQ9Y2E4 1556 aa17.93■□□□□ 0.46
LCN2-206ENST00000488391 PTPRTO14522 1441 aa17.93■□□□□ 0.46
LCN2-206ENST00000488391 CLIP1P30622 1438 aa17.92■□□□□ 0.46
LCN2-206ENST00000488391 TRAPPC8Q9Y2L5 1435 aa17.9■□□□□ 0.46
LCN2-206ENST00000488391 C3P01024 1663 aa17.9■□□□□ 0.46
LCN2-206ENST00000488391 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
LCN2-206ENST00000488391 ABCA6Q8N139 1617 aa17.89■□□□□ 0.45
LCN2-206ENST00000488391 CDC42BPBQ9Y5S2 1711 aa17.89■□□□□ 0.45
LCN2-206ENST00000488391 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
LCN2-206ENST00000488391 LTBP4Q8N2S1 1624 aa17.86■□□□□ 0.45
LCN2-206ENST00000488391 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
LCN2-206ENST00000488391 AGLP35573 1532 aa17.85■□□□□ 0.45
LCN2-206ENST00000488391 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
LCN2-206ENST00000488391 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.45
LCN2-206ENST00000488391 NCOA1Q15788 1441 aa17.83■□□□□ 0.45
LCN2-206ENST00000488391 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.44
LCN2-206ENST00000488391 ABCC1P33527 1531 aa17.82■□□□□ 0.44
LCN2-206ENST00000488391 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
LCN2-206ENST00000488391 KIDINS220Q9ULH0 1771 aa17.81■□□□□ 0.44
LCN2-206ENST00000488391 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
LCN2-206ENST00000488391 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
LCN2-206ENST00000488391 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
LCN2-206ENST00000488391 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
LCN2-206ENST00000488391 HNRNPMP52272 730 aaKnown RBP eCLIP17.79■□□□□ 0.44
LCN2-206ENST00000488391 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
LCN2-206ENST00000488391 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
LCN2-206ENST00000488391 SPAG9O60271 1321 aaKnown RBP17.77■□□□□ 0.44
LCN2-206ENST00000488391 IQSEC2Q5JU85 1478 aa17.77■□□□□ 0.44
LCN2-206ENST00000488391 NPATQ14207 1427 aa17.75■□□□□ 0.43
LCN2-206ENST00000488391 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
LCN2-206ENST00000488391 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
LCN2-206ENST00000488391 GGT6Q6P531 493 aa17.74■□□□□ 0.43
LCN2-206ENST00000488391 CCDC18Q5T9S5 1454 aa17.74■□□□□ 0.43
LCN2-206ENST00000488391 SAMD9LQ8IVG5 1584 aa17.74■□□□□ 0.43
LCN2-206ENST00000488391 SUPT6HQ7KZ85 1726 aaKnown RBP17.73■□□□□ 0.43
LCN2-206ENST00000488391 PKD2Q13563 968 aa17.72■□□□□ 0.43
LCN2-206ENST00000488391 MROH2AA6NES4 1674 aa17.71■□□□□ 0.43
LCN2-206ENST00000488391 SYCP2Q9BX26 1530 aa17.7■□□□□ 0.42
LCN2-206ENST00000488391 GPATCH8Q9UKJ3 1502 aaKnown RBP17.69■□□□□ 0.42
LCN2-206ENST00000488391 CLTCQ00610 1675 aaKnown RBP17.69■□□□□ 0.42
LCN2-206ENST00000488391 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
LCN2-206ENST00000488391 PTPRKQ15262 1439 aa17.67■□□□□ 0.42
LCN2-206ENST00000488391 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
LCN2-206ENST00000488391 A2MP01023 1474 aa17.67■□□□□ 0.42
LCN2-206ENST00000488391 ATP7AQ04656 1500 aa17.65■□□□□ 0.42
LCN2-206ENST00000488391 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
LCN2-206ENST00000488391 PLA2R1Q13018 1463 aa17.64■□□□□ 0.41
LCN2-206ENST00000488391 MYO3AQ8NEV4 1616 aa17.64■□□□□ 0.41
LCN2-206ENST00000488391 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
LCN2-206ENST00000488391 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.41
LCN2-206ENST00000488391 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
LCN2-206ENST00000488391 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
LCN2-206ENST00000488391 PIP4K2BP78356 416 aa17.63■□□□□ 0.41
LCN2-206ENST00000488391 FYCO1Q9BQS8 1478 aa17.63■□□□□ 0.41
LCN2-206ENST00000488391 ZNF644Q9H582 1327 aaPredicted RBP17.62■□□□□ 0.41
LCN2-206ENST00000488391 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
LCN2-206ENST00000488391 HSPA1LP34931 641 aa17.61■□□□□ 0.41
LCN2-206ENST00000488391 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
LCN2-206ENST00000488391 PLXNC1O60486 1568 aa17.6■□□□□ 0.41
LCN2-206ENST00000488391 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
LCN2-206ENST00000488391 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
LCN2-206ENST00000488391 TOM1O60784 492 aa17.58■□□□□ 0.4
LCN2-206ENST00000488391 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
LCN2-206ENST00000488391 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
LCN2-206ENST00000488391 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
LCN2-206ENST00000488391 KIF3BO15066 747 aa17.55■□□□□ 0.4
LCN2-206ENST00000488391 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
LCN2-206ENST00000488391 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms